CuGenDBv2

Gene ID	Cucsat.G18059
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Late cornified envelope protein 1E
Genome location	ctg3345:4654502..4655477
RNA-Seq Expression	Cucsat.G18059
Synteny	Cucsat.G18059
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0041671.1 uncharacterized protein E6C27_scaffold14518G00010 [Cucumis melo var. makuwa]

1.11e-72

88.62

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Query:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS-RSHGSSS-RRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHG
        MCGDIGFPDKLFHCNK        YCSNYYSESAEPIEVCDWCQCEGRSTS RSHGSSS RRPPSTGTNATGIM+RSEYS DKLIKHHH DSPTEKGKHG
Subjt:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS-RSHGSSS-RRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHG

Query:  GAGSTSSPRPTTRRYKLLKDVMC
        GAGST SPRPTTRRYKLLKDVMC
Subjt:  GAGSTSSPRPTTRRYKLLKDVMC

KAG6575224.1 hypothetical protein SDJN03_25863, partial [Cucurbita argyrosperma subsp. sororia]

8.60e-69

80.49

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Query:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPT--EKGKHG
        +CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+SRSHG+SSRRPP T T A GI++RS YSGDK IKHHH DS    +KGK G
Subjt:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPT--EKGKHG

Query:  GAGSTSSPRPTTRRYKLLKDVMC
        GAGS +SPRPTTRRYKLLKDVMC
Subjt:  GAGSTSSPRPTTRRYKLLKDVMC

XP_004140491.1 uncharacterized protein LOC101205257 [Cucumis sativus]

5.24e-90

100

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Query:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGA
        MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGA
Subjt:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGA

Query:  GSTSSPRPTTRRYKLLKDVMC
        GSTSSPRPTTRRYKLLKDVMC
Subjt:  GSTSSPRPTTRRYKLLKDVMC

XP_008467003.1 PREDICTED: uncharacterized protein LOC103504413 [Cucumis melo]

1.18e-82

95.12

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Query:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS-RSHGSSS-RRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHG
        MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS RSHGSSS RRPPSTGTNATGIM+RSEYS DKLIKHHH DSPTEKGKHG
Subjt:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS-RSHGSSS-RRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHG

Query:  GAGSTSSPRPTTRRYKLLKDVMC
        GAGST SPRPTTRRYKLLKDVMC
Subjt:  GAGSTSSPRPTTRRYKLLKDVMC

XP_038875571.1 uncharacterized protein LOC120067983 [Benincasa hispida]

1.01e-76

88.62

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Query:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPT--EKGKHG
        MCGDIGFPDKLF CNKC NRFQHSYCSNYYSESAEPIEVCDWCQCEGR++SRSHGSSSRRPPSTGTNA G+M+RSEYSG+K IKHHH DS T  EKGKHG
Subjt:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPT--EKGKHG

Query:  GAGSTSSPRPTTRRYKLLKDVMC
        GAGST SPRPTTRRYKLLKDVMC
Subjt:  GAGSTSSPRPTTRRYKLLKDVMC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KFQ0 Uncharacterized protein

2.53e-90

100

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Query:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGA
        MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGA
Subjt:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGA

Query:  GSTSSPRPTTRRYKLLKDVMC
        GSTSSPRPTTRRYKLLKDVMC
Subjt:  GSTSSPRPTTRRYKLLKDVMC

A0A1S3CSH8 uncharacterized protein LOC103504413

5.70e-83

95.12

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Query:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS-RSHGSSS-RRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHG
        MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS RSHGSSS RRPPSTGTNATGIM+RSEYS DKLIKHHH DSPTEKGKHG
Subjt:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS-RSHGSSS-RRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHG

Query:  GAGSTSSPRPTTRRYKLLKDVMC
        GAGST SPRPTTRRYKLLKDVMC
Subjt:  GAGSTSSPRPTTRRYKLLKDVMC

A0A5D3BDU2 Uncharacterized protein

5.40e-73

88.62

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Query:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS-RSHGSSS-RRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHG
        MCGDIGFPDKLFHCNK        YCSNYYSESAEPIEVCDWCQCEGRSTS RSHGSSS RRPPSTGTNATGIM+RSEYS DKLIKHHH DSPTEKGKHG
Subjt:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS-RSHGSSS-RRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHG

Query:  GAGSTSSPRPTTRRYKLLKDVMC
        GAGST SPRPTTRRYKLLKDVMC
Subjt:  GAGSTSSPRPTTRRYKLLKDVMC

A0A6J1H4E1 uncharacterized protein LOC111460301

1.19e-68

80.49

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Query:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPT--EKGKHG
        +CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+SRSHG+SSRRPP T T   GIM+RS YSGDK IKHHH DS    +KGK G
Subjt:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPT--EKGKHG

Query:  GAGSTSSPRPTTRRYKLLKDVMC
        GAGS +SPRPTTRRYKLLKDVMC
Subjt:  GAGSTSSPRPTTRRYKLLKDVMC

A0A6J1L0S8 uncharacterized protein LOC111499326

1.19e-68

80.49

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Query:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPT--EKGKHG
        +CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+SRSHG+SSRRPP T T A GIM+RS YSGDK IKHHH D+    +KGK G
Subjt:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPT--EKGKHG

Query:  GAGSTSSPRPTTRRYKLLKDVMC
        GAGS  SPRPTTRRYKLLKDVMC
Subjt:  GAGSTSSPRPTTRRYKLLKDVMC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G02070.1 unknown protein

1.3e-31

54.76

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Query:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS---RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHH--HDSPTEKG
        MCGD+GF DKLF C  CR RFQHSYCSNYY + AEP E+CDWC+ + R  S   R  GSSS++P S+         RSEYS    IKH++  HD    KG
Subjt:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS---RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHH--HDSPTEKG

Query:  KHGGAGSTSSPRPTTRRYKLLKDVMC
          G  G  +SP+  TRRYKLLKDVMC
Subjt:  KHGGAGSTSSPRPTTRRYKLLKDVMC

AT3G60520.1 unknown protein

1.4e-28

52.99

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Query:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS-TSRSH---GSSSRRPPSTGTNATGIMTRSEYSG-DKLIKHHHHDSPT---
        MCGD+GF DKLFHC+KC NRFQHSYCS+YY E A+PI++CDWCQCE +S T   H   G SS+R             RSEYS     IK    +  T   
Subjt:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS-TSRSH---GSSSRRPPSTGTNATGIMTRSEYSG-DKLIKHHHHDSPT---

Query:  -----EKGKHGGAGSTSSPRPTTRRYKLLKDVMC
             +KGK G      SPRP TRRYKLLKDVMC
Subjt:  -----EKGKHGGAGSTSSPRPTTRRYKLLKDVMC

Sequences

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CDS sequence

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ATGTGTGGCGATATCGGTTTCCCCGACAAGCTCTTCCACTGTAACAAGTGTCGCAACCGCTTCCAACATTCCTACTGCAGCAATTACTATAGTGAATCGGCGGAGCCAAT
AGAGGTGTGTGATTGGTGTCAGTGTGAAGGACGGAGCACCTCCAGATCACATGGAAGCTCGTCCAGGAGACCGCCCTCCACTGGTACAAACGCCACCGGAATCATGACCC
GCTCCGAGTATTCCGGCGACAAATTAATCAAGCATCATCATCATGATTCTCCCACCGAGAAGGGGAAGCACGGCGGCGCCGGTAGTACTTCGTCGCCCAGGCCGACGACG
CGGAGGTACAAGCTTCTCAAGGACGTAATGTGCTGA

mRNA sequence

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Protein sequence

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MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAGSTSSPRPTT
RRYKLLKDVMC

Cucsat.G18059 (gene) of Cucumber (B10) v3 genome