; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G18089 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G18089
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionMajor centromere autoantigen B
Genome locationctg3345:4701594..4702491
RNA-Seq ExpressionCucsat.G18089
SyntenyCucsat.G18089
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039742.1 hypothetical protein E6C27_scaffold122G00020 [Cucumis melo var. makuwa]3.17e-6189.51Show/hide
Query:  EVDEVPEEEAAPNKEAEEFADEDEAPNPKELNPVEDEETPNKDEAEVAAEEGALEEDAPVEAEAREKEKGEEVEVEKEEEPKPKEEEE--GLDVGLGNGE
        E DEVPEEEAAPNK AEEFADEDEAPNPKELNPVEDEETPNKDEAE A EEG LEEDAPVEAEAREKEKGEEVE EKEEEPKPKEEEE  GL+VGLGNGE
Subjt:  EVDEVPEEEAAPNKEAEEFADEDEAPNPKELNPVEDEETPNKDEAEVAAEEGALEEDAPVEAEAREKEKGEEVEVEKEEEPKPKEEEE--GLDVGLGNGE

Query:  EEEVGFEEEEEEDERDKGEGDDPKEKLVDPKEKPVVEENGEED
        +EEVGFEEEEE+D RDKGE DDPKEK+VDPKEKPVVEENGEE+
Subjt:  EEEVGFEEEEEEDERDKGEGDDPKEKLVDPKEKPVVEENGEED
XP_011658400.1 cilia- and flagella-associated protein 251 [Cucumis sativus]1.60e-3777.87Show/hide
Query:  FADEDEAPNPKELNPVEDEETPNKDEAEVAAEEGALEEDAPVEAEAREKEKGE---EVEVEKEEEPKPKEEEEGLDVGLGNGEEEEVGFEEEEEE---DE
        FADE+EA N KELNPVEDEET NKDEA VA EEG LE+DA VEAEAREKE GE   EVE EKE+EPKPKEEE GL+VGLGNGE+EEVGFEEEEEE   DE
Subjt:  FADEDEAPNPKELNPVEDEETPNKDEAEVAAEEGALEEDAPVEAEAREKEKGE---EVEVEKEEEPKPKEEEEGLDVGLGNGEEEEVGFEEEEEE---DE

Query:  RDKGEGDDPKEKLVDPKEKPVV
        RDKG+GDDPKEK+ DPK KP +
Subjt:  RDKGEGDDPKEKLVDPKEKPVV
TrEMBL top hitse value%identityAlignment
A0A0A0KDT9 Uncharacterized protein7.74e-3877.87Show/hide
Query:  FADEDEAPNPKELNPVEDEETPNKDEAEVAAEEGALEEDAPVEAEAREKEKGE---EVEVEKEEEPKPKEEEEGLDVGLGNGEEEEVGFEEEEEE---DE
        FADE+EA N KELNPVEDEET NKDEA VA EEG LE+DA VEAEAREKE GE   EVE EKE+EPKPKEEE GL+VGLGNGE+EEVGFEEEEEE   DE
Subjt:  FADEDEAPNPKELNPVEDEETPNKDEAEVAAEEGALEEDAPVEAEAREKEKGE---EVEVEKEEEPKPKEEEEGLDVGLGNGEEEEVGFEEEEEE---DE

Query:  RDKGEGDDPKEKLVDPKEKPVV
        RDKG+GDDPKEK+ DPK KP +
Subjt:  RDKGEGDDPKEKLVDPKEKPVV
A0A5A7T8D7 Major centromere autoantigen B1.53e-6189.51Show/hide
Query:  EVDEVPEEEAAPNKEAEEFADEDEAPNPKELNPVEDEETPNKDEAEVAAEEGALEEDAPVEAEAREKEKGEEVEVEKEEEPKPKEEEE--GLDVGLGNGE
        E DEVPEEEAAPNK AEEFADEDEAPNPKELNPVEDEETPNKDEAE A EEG LEEDAPVEAEAREKEKGEEVE EKEEEPKPKEEEE  GL+VGLGNGE
Subjt:  EVDEVPEEEAAPNKEAEEFADEDEAPNPKELNPVEDEETPNKDEAEVAAEEGALEEDAPVEAEAREKEKGEEVEVEKEEEPKPKEEEE--GLDVGLGNGE

Query:  EEEVGFEEEEEEDERDKGEGDDPKEKLVDPKEKPVVEENGEED
        +EEVGFEEEEE+D RDKGE DDPKEK+VDPKEKPVVEENGEE+
Subjt:  EEEVGFEEEEEEDERDKGEGDDPKEKLVDPKEKPVVEENGEED
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAGTGGACAAAGATGACGCAAACAAGTTTGAAGTGGATGAGGTCCCGGAGGAGGAAGCAGCCCCAAACAAGGAAGCAGAGGAGTTTGCTGACGAGGATGAAGCCCCGAA
TCCGAAAGAATTGAATCCAGTTGAGGATGAAGAAACCCCAAACAAGGACGAAGCTGAAGTTGCTGCGGAAGAAGGGGCGCTAGAGGAAGATGCTCCGGTGGAAGCGGAGG
CGAGGGAGAAAGAGAAGGGAGAGGAAGTAGAGGTGGAGAAAGAGGAAGAGCCAAAGCCAAAGGAAGAAGAAGAAGGATTGGACGTTGGATTGGGAAATGGGGAGGAAGAG
GAAGTAGGGTTTGAGGAGGAGGAGGAGGAAGATGAAAGAGATAAAGGGGAAGGGGATGATCCGAAGGAAAAGTTGGTGGATCCGAAGGAGAAACCAGTGGTTGAGGAAAA
TGGAGAAGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
GAAGTGGACAAAGATGACGCAAACAAGTTTGAAGTGGATGAGGTCCCGGAGGAGGAAGCAGCCCCAAACAAGGAAGCAGAGGAGTTTGCTGACGAGGATGAAGCCCCGAA
TCCGAAAGAATTGAATCCAGTTGAGGATGAAGAAACCCCAAACAAGGACGAAGCTGAAGTTGCTGCGGAAGAAGGGGCGCTAGAGGAAGATGCTCCGGTGGAAGCGGAGG
CGAGGGAGAAAGAGAAGGGAGAGGAAGTAGAGGTGGAGAAAGAGGAAGAGCCAAAGCCAAAGGAAGAAGAAGAAGGATTGGACGTTGGATTGGGAAATGGGGAGGAAGAG
GAAGTAGGGTTTGAGGAGGAGGAGGAGGAAGATGAAAGAGATAAAGGGGAAGGGGATGATCCGAAGGAAAAGTTGGTGGATCCGAAGGAGAAACCAGTGGTTGAGGAAAA
TGGAGAAGAAGATTGA
Protein sequenceShow/hide protein sequence
EVDKDDANKFEVDEVPEEEAAPNKEAEEFADEDEAPNPKELNPVEDEETPNKDEAEVAAEEGALEEDAPVEAEAREKEKGEEVEVEKEEEPKPKEEEEGLDVGLGNGEEE
EVGFEEEEEEDERDKGEGDDPKEKLVDPKEKPVVEENGEED