; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G18107 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G18107
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationctg3345:339072..342708
RNA-Seq ExpressionCucsat.G18107
SyntenyCucsat.G18107
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037189.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]8.92e-6738.46Show/hide
Query:  MVHTQFLCTIEILHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA--------------------
        MV TQF  TI+IL T+NAM+YKDS  LSFL  QGTLIQRSCPHTSQQNGRAERKH +ILDSVRAQLL  +C + FWGE A                    
Subjt:  MVHTQFLCTIEILHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA--------------------

Query:  -------PPLFMSSTVF------------------------------------------------------------LLKSF----------------TM
               PP + +  +F                                                             L SF                T+
Subjt:  -------PPLFMSSTVF------------------------------------------------------------LLKSF----------------TM

Query:  FP---------------------------HLNGYMVMVLNIKDFVVGI-----PSLND------------YVDLVLSPF---------------------
        FP                           HL+    + L + D  +G       ++ND            YVDL    F                     
Subjt:  FP---------------------------HLNGYMVMVLNIKDFVVGI-----PSLND------------YVDLVLSPF---------------------

Query:  -------------GNI-------------------------------APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDP
                     G I                               APRAWFATFSSTITQLGFTSS+HDS LF+RQTS  IVLLLLYVD MIITGDDP
Subjt:  -------------GNI-------------------------------APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDP

Query:  QVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
        Q +SDLQ YL +HFE+KDLG L+YFLGLEISSS  GYY+SQ KYAS+L+ RSGITDS TS T LDPNV
Subjt:  QVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV

KAA0041166.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.84e-6942.79Show/hide
Query:  NNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA-----------PPLFMSSTVFLLKSFTMFP-----
        +NAMEYKDS  LSFLA QGTLIQRSCPHTSQQNGRAERKH +ILDSV AQLL  +C EKFWGE A             L  S T   L      P     
Subjt:  NNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA-----------PPLFMSSTVFLLKSFTMFP-----

Query:  ---------------HLNGY--------MVMVLNIKDFVVG----------IPSLN-----DYVDL----------------------------------
                       HL  Y        +V   + K+              + +L      DYVDL                                  
Subjt:  ---------------HLNGY--------MVMVLNIKDFVVG----------IPSLN-----DYVDL----------------------------------

Query:  -----------VLSPFGNI--------------------------------------------------------------APRAWFATFSSTITQLGFT
                     +P   +                                                              APRAWFATFSSTITQLGFT
Subjt:  -----------VLSPFGNI--------------------------------------------------------------APRAWFATFSSTITQLGFT

Query:  SSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDP
        SSSHDS LFTRQT  GIVLLLLYVD MIITGDDPQ +SDLQCYL KHFE+KDLG L+YFLGLEISSS  GYY+SQ KYAS+L+ RSGITDS T STPLDP
Subjt:  SSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDP

Query:  NV
        NV
Subjt:  NV

KAA0052097.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.49e-6536.65Show/hide
Query:  MVHTQFLCTIEILHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVAPPLFMSSTVFLLKSFTMFPH
        M+ TQF C I+   T+NA+EYKDS LLSFL+ QGTL+QRSCPHTSQQNGRAERKH +ILDS RA LL  +C EKFWGE A    +   VFL  SF    H
Subjt:  MVHTQFLCTIEILHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVAPPLFMSSTVFLLKSFTMFPH

Query:  LNGYMVMVLNI---KDFVVGI-------------------------------------------------------------------------------
           YMV++L I   K  VV +                                                                               
Subjt:  LNGYMVMVLNI---KDFVVGI-------------------------------------------------------------------------------

Query:  -----------PSLN----------------DYVDL---------------------------------------------VLSPFGNI-----------
                   PS +                DYVDL                                               +P   +           
Subjt:  -----------PSLN----------------DYVDL---------------------------------------------VLSPFGNI-----------

Query:  ---------------------------------------------------APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIIT
                                                           APRAWFATFSSTITQLGFTSS HD+ LFTR T +GIVLLLLYVD MIIT
Subjt:  ---------------------------------------------------APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIIT

Query:  GDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
        G+DPQ +SDLQ YL +HFE+KDLG+L+YFLGLE+S   DGY +SQ KYAS+LL RSGITDS T+STPLDPNV
Subjt:  GDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV

KAA0058220.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.08e-7144.07Show/hide
Query:  MVHTQFLCTIEILHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA--------------------
        MV TQF  TI+IL T+NAMEYKDS  LSFLA QGTLIQRSCPHT QQNGRAERKH +ILDSV  QLL  +C E FWGE A                    
Subjt:  MVHTQFLCTIEILHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA--------------------

Query:  -------PPLFMSSTVFLLKSFTMF-PHLN---------------------------------------------------GYMVMVLNIKD--------
               PP +    VF    F +  PH +                                                   G M+  L +K+        
Subjt:  -------PPLFMSSTVFLLKSFTMF-PHLN---------------------------------------------------GYMVMVLNIKD--------

Query:  ------FVVGIPSL--------------------NDYVDLVLSP------------------FG-NIAPRAWFATFSSTITQLGFTSSSHDSILFTRQTS
              FV  + ++                      Y ++ + P                  +G   APRAWFATF+STITQLGFTSSSHDS LFTRQT 
Subjt:  ------FVVGIPSL--------------------NDYVDLVLSP------------------FG-NIAPRAWFATFSSTITQLGFTSSSHDSILFTRQTS

Query:  RGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
         GIVLLLLYVD MIITGDD Q +S+LQ YL K+FE+KDLG LSYF GLEISSS  GYY+SQ KYAS+LL R G TDS T  TPLDPNV
Subjt:  RGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV

XP_031738012.1 uncharacterized protein LOC116402635 [Cucumis sativus]3.38e-182100Show/hide
Query:  MVHTQFLCTIEILHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVAPPLFMSSTVFLLKSFTMFPH
        MVHTQFLCTIEILHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVAPPLFMSSTVFLLKSFTMFPH
Subjt:  MVHTQFLCTIEILHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVAPPLFMSSTVFLLKSFTMFPH

Query:  LNGYMVMVLNIKDFVVGIPSLNDYVDLVLSPFGNIAPRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSK
        LNGYMVMVLNIKDFVVGIPSLNDYVDLVLSPFGNIAPRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSK
Subjt:  LNGYMVMVLNIKDFVVGIPSLNDYVDLVLSPFGNIAPRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSK

Query:  HFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
        HFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
Subjt:  HFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV

TrEMBL top hitse value%identityAlignment
A0A5A7TGJ6 Putative mitochondrial protein1.86e-6942.79Show/hide
Query:  NNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA-----------PPLFMSSTVFLLKSFTMFP-----
        +NAMEYKDS  LSFLA QGTLIQRSCPHTSQQNGRAERKH +ILDSV AQLL  +C EKFWGE A             L  S T   L      P     
Subjt:  NNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA-----------PPLFMSSTVFLLKSFTMFP-----

Query:  ---------------HLNGY--------MVMVLNIKDFVVG----------IPSLN-----DYVDL----------------------------------
                       HL  Y        +V   + K+              + +L      DYVDL                                  
Subjt:  ---------------HLNGY--------MVMVLNIKDFVVG----------IPSLN-----DYVDL----------------------------------

Query:  -----------VLSPFGNI--------------------------------------------------------------APRAWFATFSSTITQLGFT
                     +P   +                                                              APRAWFATFSSTITQLGFT
Subjt:  -----------VLSPFGNI--------------------------------------------------------------APRAWFATFSSTITQLGFT

Query:  SSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDP
        SSSHDS LFTRQT  GIVLLLLYVD MIITGDDPQ +SDLQCYL KHFE+KDLG L+YFLGLEISSS  GYY+SQ KYAS+L+ RSGITDS T STPLDP
Subjt:  SSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDP

Query:  NV
        NV
Subjt:  NV

A0A5A7UCC7 Retrovirus-related Pol polyprotein from transposon TNT 1-942.66e-6536.65Show/hide
Query:  MVHTQFLCTIEILHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVAPPLFMSSTVFLLKSFTMFPH
        M+ TQF C I+   T+NA+EYKDS LLSFL+ QGTL+QRSCPHTSQQNGRAERKH +ILDS RA LL  +C EKFWGE A    +   VFL  SF    H
Subjt:  MVHTQFLCTIEILHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVAPPLFMSSTVFLLKSFTMFPH

Query:  LNGYMVMVLNI---KDFVVGI-------------------------------------------------------------------------------
           YMV++L I   K  VV +                                                                               
Subjt:  LNGYMVMVLNI---KDFVVGI-------------------------------------------------------------------------------

Query:  -----------PSLN----------------DYVDL---------------------------------------------VLSPFGNI-----------
                   PS +                DYVDL                                               +P   +           
Subjt:  -----------PSLN----------------DYVDL---------------------------------------------VLSPFGNI-----------

Query:  ---------------------------------------------------APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIIT
                                                           APRAWFATFSSTITQLGFTSS HD+ LFTR T +GIVLLLLYVD MIIT
Subjt:  ---------------------------------------------------APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIIT

Query:  GDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
        G+DPQ +SDLQ YL +HFE+KDLG+L+YFLGLE+S   DGY +SQ KYAS+LL RSGITDS T+STPLDPNV
Subjt:  GDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV

A0A5A7UST7 Putative mitochondrial protein5.25e-7244.07Show/hide
Query:  MVHTQFLCTIEILHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA--------------------
        MV TQF  TI+IL T+NAMEYKDS  LSFLA QGTLIQRSCPHT QQNGRAERKH +ILDSV  QLL  +C E FWGE A                    
Subjt:  MVHTQFLCTIEILHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA--------------------

Query:  -------PPLFMSSTVFLLKSFTMF-PHLN---------------------------------------------------GYMVMVLNIKD--------
               PP +    VF    F +  PH +                                                   G M+  L +K+        
Subjt:  -------PPLFMSSTVFLLKSFTMF-PHLN---------------------------------------------------GYMVMVLNIKD--------

Query:  ------FVVGIPSL--------------------NDYVDLVLSP------------------FG-NIAPRAWFATFSSTITQLGFTSSSHDSILFTRQTS
              FV  + ++                      Y ++ + P                  +G   APRAWFATF+STITQLGFTSSSHDS LFTRQT 
Subjt:  ------FVVGIPSL--------------------NDYVDLVLSP------------------FG-NIAPRAWFATFSSTITQLGFTSSSHDSILFTRQTS

Query:  RGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
         GIVLLLLYVD MIITGDD Q +S+LQ YL K+FE+KDLG LSYF GLEISSS  GYY+SQ KYAS+LL R G TDS T  TPLDPNV
Subjt:  RGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV

A0A5D3BTS2 Putative mitochondrial protein9.21e-6437.2Show/hide
Query:  MVHTQFLCTIEILHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA--------------------
        M+ TQF C I+ L T+NA+EYKDS LLSFL+ QGTL+QRSCPHTSQQNGRA+RKH +ILDSVRA LL  +C EKFWGE A                    
Subjt:  MVHTQFLCTIEILHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA--------------------

Query:  -------PPLFMSSTVFLLKSF---------------------------------------------------TMFPHLNGYMVMV--------------
               PP + +   F    F                                                   TMF  L+ +                  
Subjt:  -------PPLFMSSTVFLLKSF---------------------------------------------------TMFPHLNGYMVMV--------------

Query:  ------------------------LNIKDFVVGIP-------------------------SLND------------YVDL--------------------
                                L+I D   G P                         S+ND            YVDL                    
Subjt:  ------------------------LNIKDFVVGIP-------------------------SLND------------YVDL--------------------

Query:  ----------VLSPFGNI------------------APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLS
                  +  P G                    APRAWFATF+STITQL FT S HD+ LFTR T +GIVLL LYVD MIITG+DPQ +SDLQ YL 
Subjt:  ----------VLSPFGNI------------------APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLS

Query:  KHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
        +HFE+KDLG+L+YFLGLE+S   DGY +SQ KYAS+LL RSGITDS T+STPLDPNV
Subjt:  KHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV

A0A5D3CPU5 Retrovirus-related Pol polyprotein from transposon TNT 1-944.32e-6738.46Show/hide
Query:  MVHTQFLCTIEILHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA--------------------
        MV TQF  TI+IL T+NAM+YKDS  LSFL  QGTLIQRSCPHTSQQNGRAERKH +ILDSVRAQLL  +C + FWGE A                    
Subjt:  MVHTQFLCTIEILHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVA--------------------

Query:  -------PPLFMSSTVF------------------------------------------------------------LLKSF----------------TM
               PP + +  +F                                                             L SF                T+
Subjt:  -------PPLFMSSTVF------------------------------------------------------------LLKSF----------------TM

Query:  FP---------------------------HLNGYMVMVLNIKDFVVGI-----PSLND------------YVDLVLSPF---------------------
        FP                           HL+    + L + D  +G       ++ND            YVDL    F                     
Subjt:  FP---------------------------HLNGYMVMVLNIKDFVVGI-----PSLND------------YVDLVLSPF---------------------

Query:  -------------GNI-------------------------------APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDP
                     G I                               APRAWFATFSSTITQLGFTSS+HDS LF+RQTS  IVLLLLYVD MIITGDDP
Subjt:  -------------GNI-------------------------------APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDP

Query:  QVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV
        Q +SDLQ YL +HFE+KDLG L+YFLGLEISSS  GYY+SQ KYAS+L+ RSGITDS TS T LDPNV
Subjt:  QVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.7e-0928.46Show/hide
Query:  APRAWFATFSSTITQLGFTSSSHDSILF--TRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYA
        A R WF  F   + +  F +SS D  ++   +      + +LLYVD ++I   D   M++ + YL + F + DL  + +F+G+ I    D  Y+SQ  Y 
Subjt:  APRAWFATFSSTITQLGFTSSSHDSILF--TRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYA

Query:  SNLLRRSGITDSTTSSTPLDPNV
          +L +  + +    STPL   +
Subjt:  SNLLRRSGITDSTTSSTPLDPNV

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.6e-1035Show/hide
Query:  APRAWFATFSSTI-TQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEI--SSSYDGYYISQGKY
        APR W+  F S + +Q    + S   + F R +    ++LLLYVD M+I G D  +++ L+  LSK F++KDLG     LG++I    +    ++SQ KY
Subjt:  APRAWFATFSSTI-TQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEI--SSSYDGYYISQGKY

Query:  ASNLLRRSGITDSTTSSTPL
           +L R  + ++   STPL
Subjt:  ASNLLRRSGITDSTTSSTPL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-949.3e-0331.82Show/hide
Query:  LHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGE
        L ++N  EY       + +  G   +++ P T Q NG AER +  I++ VR+ L      + FWGE
Subjt:  LHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGE

P92519 Uncharacterized mitochondrial protein AtMg008101.6e-1043.04Show/hide
Query:  LLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPL
        LLLYVD +++TG    +++ L   LS  F +KDLG + YFLG++I +   G ++SQ KYA  +L  +G+ D    STPL
Subjt:  LLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.5e-1636.67Show/hide
Query:  APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASN
        APRAW+    + +  +GF +S  D+ LF  Q  + IV +L+YVD ++ITG+DP ++ +    LS+ F +KD   L YFLG+E      G ++SQ +Y  +
Subjt:  APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASN

Query:  LLRRSGITDSTTSSTPLDPN
        LL R+ +  +   +TP+ P+
Subjt:  LLRRSGITDSTTSSTPLDPN

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.8e-1435.04Show/hide
Query:  APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASN
        APRAW+    + +  +GF +S  D+ LF  Q  R I+ +L+YVD ++ITG+D  ++      LS+ F +K+   L YFLG+E      G ++SQ +Y  +
Subjt:  APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASN

Query:  LLRRSGITDSTTSSTPL
        LL R+ +  +   +TP+
Subjt:  LLRRSGITDSTTSSTPL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 84.7e-1840.5Show/hide
Query:  APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASN
        A R WF  FS T+   GF  S  D   F + T+   + +L+YVD +II  ++   + +L+  L   F+++DLG L YFLGLEI+ S  G  I Q KYA +
Subjt:  APRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASN

Query:  LLRRSGITDSTTSSTPLDPNV
        LL  +G+     SS P+DP+V
Subjt:  LLRRSGITDSTTSSTPLDPNV

ATMG00810.1 DNA/RNA polymerases superfamily protein1.1e-1143.04Show/hide
Query:  LLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPL
        LLLYVD +++TG    +++ L   LS  F +KDLG + YFLG++I +   G ++SQ KYA  +L  +G+ D    STPL
Subjt:  LLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISSSYDGYYISQGKYASNLLRRSGITDSTTSSTPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCACACACAGTTCCTTTGCACAATTGAAATCCTTCACACTAATAATGCGATGGAATACAAGGACTCTCACCTTCTTTCCTTCCTTGCCCATCAAGGCACTCTGAT
TCAACGCTCATGTCCCCACACCTCCCAACAAAATGGAAGAGCTGAACGCAAACATTGTTACATTCTAGACTCTGTTCGCGCTCAACTTTTGTTTGTTGCCTGTCTTGAAA
AATTTTGGGGAGAGGTTGCCCCACCTCTGTTTATGTCATCAACTGTCTTCCTTCTCAAGTCATTCACAATGTTTCCCCATTTGAACGGCTATATGGTTATGGTACTAAAC
ATAAAGGATTTCGTTGTTGGGATCCCATCTCTCAACGATTACGTAGATCTCGTCCTGTCACCTTTTGGGAACATCGCTCCTCGAGCTTGGTTTGCAACATTCAGTTCCAC
TATTACTCAACTTGGGTTCACCTCCAGCTCTCATGATTCGATCTTATTCACTCGTCAGACATCTCGTGGTATTGTGCTCCTTCTTTTATATGTTGATGGTATGATTATTA
CAGGTGATGATCCTCAAGTCATGTCTGATTTGCAATGTTACCTGAGTAAGCACTTTGAGATTAAGGATTTAGGAACCCTCAGTTATTTTCTTGGCCTTGAGATCTCATCC
TCATATGATGGCTACTACATATCTCAAGGTAAATATGCATCTAACCTCCTCAGACGATCTGGTATTACCGACTCTACCACATCCTCAACGCCTTTAGATCCAAATGTGTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGTTCACACACAGTTCCTTTGCACAATTGAAATCCTTCACACTAATAATGCGATGGAATACAAGGACTCTCACCTTCTTTCCTTCCTTGCCCATCAAGGCACTCTGAT
TCAACGCTCATGTCCCCACACCTCCCAACAAAATGGAAGAGCTGAACGCAAACATTGTTACATTCTAGACTCTGTTCGCGCTCAACTTTTGTTTGTTGCCTGTCTTGAAA
AATTTTGGGGAGAGGTTGCCCCACCTCTGTTTATGTCATCAACTGTCTTCCTTCTCAAGTCATTCACAATGTTTCCCCATTTGAACGGCTATATGGTTATGGTACTAAAC
ATAAAGGATTTCGTTGTTGGGATCCCATCTCTCAACGATTACGTAGATCTCGTCCTGTCACCTTTTGGGAACATCGCTCCTCGAGCTTGGTTTGCAACATTCAGTTCCAC
TATTACTCAACTTGGGTTCACCTCCAGCTCTCATGATTCGATCTTATTCACTCGTCAGACATCTCGTGGTATTGTGCTCCTTCTTTTATATGTTGATGGTATGATTATTA
CAGGTGATGATCCTCAAGTCATGTCTGATTTGCAATGTTACCTGAGTAAGCACTTTGAGATTAAGGATTTAGGAACCCTCAGTTATTTTCTTGGCCTTGAGATCTCATCC
TCATATGATGGCTACTACATATCTCAAGGTAAATATGCATCTAACCTCCTCAGACGATCTGGTATTACCGACTCTACCACATCCTCAACGCCTTTAGATCCAAATGTGTG
A
Protein sequenceShow/hide protein sequence
MVHTQFLCTIEILHTNNAMEYKDSHLLSFLAHQGTLIQRSCPHTSQQNGRAERKHCYILDSVRAQLLFVACLEKFWGEVAPPLFMSSTVFLLKSFTMFPHLNGYMVMVLN
IKDFVVGIPSLNDYVDLVLSPFGNIAPRAWFATFSSTITQLGFTSSSHDSILFTRQTSRGIVLLLLYVDGMIITGDDPQVMSDLQCYLSKHFEIKDLGTLSYFLGLEISS
SYDGYYISQGKYASNLLRRSGITDSTTSSTPLDPNV