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Cucsat.G18402 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G18402
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionZinc finger, C3HC4 type family protein
Genome locationctg3379:527169..531816
RNA-Seq ExpressionCucsat.G18402
SyntenyCucsat.G18402
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019216.1 hypothetical protein SDJN02_18174, partial [Cucurbita argyrosperma subsp. argyrosperma]1.35e-4991.95Show/hide
Query:  YVTMISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        YVTMIS+LAQERLLG ALGSVFAGVVVFEQRKS+Y SIS+NYPP TQSPMRKPVLAKKYGPEFSHLWN AVDQTFGPVIQALSSRGW
Subjt:  YVTMISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
KGN66041.2 hypothetical protein Csa_019677 [Cucumis sativus]8.91e-9098.54Show/hide
Query:  AKVGCSPATTEGSLFTTAQSCPPSSLHHLSPEKPFFISFSDGNQAVKLYVTMISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSP--M
        AKVGCSPATTEGSLFTTAQSCPPSSLHHLSPEKPFFISFSDGNQAVKLYVTMISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSP  M
Subjt:  AKVGCSPATTEGSLFTTAQSCPPSSLHHLSPEKPFFISFSDGNQAVKLYVTMISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSP--M

Query:  RKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        RKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
Subjt:  RKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
XP_004152895.1 uncharacterized protein LOC101206005 isoform X2 [Cucumis sativus]5.73e-52100Show/hide
Query:  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
Subjt:  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
XP_008457526.1 PREDICTED: uncharacterized protein LOC103497197 isoform X2 [Cucumis melo]6.69e-5197.62Show/hide
Query:  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MISVLAQERLLGFALGS FAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGP+IQALSSRGW
Subjt:  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
XP_011657967.1 uncharacterized protein LOC101206005 isoform X1 [Cucumis sativus]5.83e-5097.67Show/hide
Query:  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSP--MRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSP  MRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
Subjt:  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSP--MRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
TrEMBL top hitse value%identityAlignment
A0A0A0LXB2 Uncharacterized protein3.45e-9199.26Show/hide
Query:  AKVGCSPATTEGSLFTTAQSCPPSSLHHLSPEKPFFISFSDGNQAVKLYVTMISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRK
        AKVGCSPATTE SLFTTAQSCPPSSLHHLSPEKPFFISFSDGNQAVKLYVTMISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRK
Subjt:  AKVGCSPATTEGSLFTTAQSCPPSSLHHLSPEKPFFISFSDGNQAVKLYVTMISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRK

Query:  PVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        PVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
Subjt:  PVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
A0A1S3C5P6 uncharacterized protein LOC103497197 isoform X23.24e-5197.62Show/hide
Query:  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MISVLAQERLLGFALGS FAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGP+IQALSSRGW
Subjt:  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
A0A1S3C5V0 uncharacterized protein LOC103497197 isoform X13.29e-4995.35Show/hide
Query:  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSP--MRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MISVLAQERLLGFALGS FAGVVVFEQRKSLYQSISENYPPATQSP  MRKPVLAKKYGPEFSHLWNRAVDQTFGP+IQALSSRGW
Subjt:  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSP--MRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
A0A5D3BR76 Uncharacterized protein3.24e-5197.62Show/hide
Query:  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MISVLAQERLLGFALGS FAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGP+IQALSSRGW
Subjt:  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
A0A6J1HZ79 uncharacterized protein LOC1114694465.13e-4892.86Show/hide
Query:  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MIS+LAQERLLG ALGSVFAGVVVFEQRKSLY SIS+NYPP TQSPMRKPVLAKKYGPEFSHLWN AVDQTFGPVIQALSSRGW
Subjt:  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G28430.1 unknown protein1.1e-1852.94Show/hide
Query:  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISE-NYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        MIS+LAQERLLG+ LGS   G +VFEQRK ++ S+S+       Q+ +   +  KKY  EF+ LWN+AVDQTF P I+ LSSR W
Subjt:  MISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISE-NYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAAAGGTTGGGTGCAGTCCCGCTACAACCGAAGGTTCTCTCTTTACTACGGCCCAATCGTGTCCGCCCAGCTCCCTTCACCATCTTTCCCCAGAAAAACCTTTCTTTAT
TTCTTTCTCCGACGGAAATCAAGCCGTGAAGCTTTATGTCACCATGATTTCCGTTCTTGCTCAGGAACGACTGCTTGGTTTTGCATTGGGGAGCGTGTTCGCCGGGGTTG
TTGTTTTTGAGCAACGGAAAAGCTTATACCAATCCATTTCCGAAAACTATCCACCAGCTACCCAATCTCCAATGAGAAAACCTGTGCTAGCAAAGAAGTATGGCCCAGAG
TTTTCACACCTATGGAATAGAGCTGTAGACCAGACGTTTGGACCCGTGATTCAGGCACTCAGTTCACGGGGATGGTGA
mRNA sequenceShow/hide mRNA sequence
GCAAAGGTTGGGTGCAGTCCCGCTACAACCGAAGGTTCTCTCTTTACTACGGCCCAATCGTGTCCGCCCAGCTCCCTTCACCATCTTTCCCCAGAAAAACCTTTCTTTAT
TTCTTTCTCCGACGGAAATCAAGCCGTGAAGCTTTATGTCACCATGATTTCCGTTCTTGCTCAGGAACGACTGCTTGGTTTTGCATTGGGGAGCGTGTTCGCCGGGGTTG
TTGTTTTTGAGCAACGGAAAAGCTTATACCAATCCATTTCCGAAAACTATCCACCAGCTACCCAATCTCCAATGAGAAAACCTGTGCTAGCAAAGAAGTATGGCCCAGAG
TTTTCACACCTATGGAATAGAGCTGTAGACCAGACGTTTGGACCCGTGATTCAGGCACTCAGTTCACGGGGATGGTGA
Protein sequenceShow/hide protein sequence
AKVGCSPATTEGSLFTTAQSCPPSSLHHLSPEKPFFISFSDGNQAVKLYVTMISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPE
FSHLWNRAVDQTFGPVIQALSSRGW