; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G18440 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G18440
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptioncold-regulated 413 inner membrane protein 1, chloroplastic-like
Genome locationctg3379:1560688..1563723
RNA-Seq ExpressionCucsat.G18440
SyntenyCucsat.G18440
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147401.1 cold-regulated 413 inner membrane protein 2, chloroplastic [Cucumis sativus]1.59e-146100Show/hide
Query:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKG
        MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKG
Subjt:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKG

Query:  TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAGSFQRA
        TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAGSFQRA
Subjt:  TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAGSFQRA

Query:  FDQNSIVATVAVVCITAVSFLFVI
        FDQNSIVATVAVVCITAVSFLFVI
Subjt:  FDQNSIVATVAVVCITAVSFLFVI

XP_008443932.1 PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Cucumis melo]1.43e-14195.63Show/hide
Query:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGI-----NKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
        MVCVSLSSAVSLY PSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGI     NKKK+RGLSA CYAMPVNTRTLQW+STISSVVL
Subjt:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGI-----NKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL

Query:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
Subjt:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVVCITAVSFLFVI
        SFQRAFDQNSIVATVAV+CITAVSFLFVI
Subjt:  SFQRAFDQNSIVATVAVVCITAVSFLFVI

XP_022140053.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like [Momordica charantia]2.16e-12082.97Show/hide
Query:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGI-----NKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
        MVC+SLSSA SL+  S YK+KLS PLSLRS P +AKLSLN A K+SSICYNPLRFAVG+EGI     NK++SRGL+ VCYAMP+  R +QWISTIS VVL
Subjt:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGI-----NKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL

Query:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAA+LAFQHFSRAG
Subjt:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVVCITAVSFLFVI
        SF+RAFDQNSIVAT AVVC+TA SFL VI
Subjt:  SFQRAFDQNSIVATVAVVCITAVSFLFVI

XP_022994881.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita maxima]1.03e-12083.84Show/hide
Query:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE-----GINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
        MVCV LSSA+SL+ P  +KSKLS PLSLRSS PNAKL+ N AAKQSSIC NP+RF  GS+      INKK+ RGLSAVCYAMP++ R LQWISTISSV+L
Subjt:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE-----GINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL

Query:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVVCITAVSFLFVI
        SF+RAFDQNSIVATVA++C+TAVSFL VI
Subjt:  SFQRAFDQNSIVATVAVVCITAVSFLFVI

XP_038896035.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like [Benincasa hispida]3.85e-13089.08Show/hide
Query:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGI-----NKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
        MVCVSLSSAVSLY PS Y+SKLSVPLSLRSSPPNAKLS + AAKQSSICYNPLRFAVGSEGI      KK+SRGLSA+CYAMPVN RTLQWISTISS VL
Subjt:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGI-----NKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL

Query:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLAKGTGIQKSFIVPLFAL APASV+SWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQ+LRGTQEG IISL+IAAYLAFQHFSRAG
Subjt:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVVCITAVSFLFVI
        SF+RAFDQNSIVATVAV+C TAVSFL VI
Subjt:  SFQRAFDQNSIVATVAVVCITAVSFLFVI

TrEMBL top hitse value%identityAlignment
A0A0A0LXM7 Uncharacterized protein7.69e-147100Show/hide
Query:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKG
        MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKG
Subjt:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKG

Query:  TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAGSFQRA
        TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAGSFQRA
Subjt:  TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAGSFQRA

Query:  FDQNSIVATVAVVCITAVSFLFVI
        FDQNSIVATVAVVCITAVSFLFVI
Subjt:  FDQNSIVATVAVVCITAVSFLFVI

A0A1S3B961 cold-regulated 413 inner membrane protein 2, chloroplastic-like6.94e-14295.63Show/hide
Query:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGI-----NKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
        MVCVSLSSAVSLY PSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGI     NKKK+RGLSA CYAMPVNTRTLQW+STISSVVL
Subjt:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGI-----NKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL

Query:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
Subjt:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVVCITAVSFLFVI
        SFQRAFDQNSIVATVAV+CITAVSFLFVI
Subjt:  SFQRAFDQNSIVATVAVVCITAVSFLFVI

A0A5D3DB21 Cold-regulated 413 inner membrane protein 26.94e-14295.63Show/hide
Query:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGI-----NKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
        MVCVSLSSAVSLY PSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGI     NKKK+RGLSA CYAMPVNTRTLQW+STISSVVL
Subjt:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGI-----NKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL

Query:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
Subjt:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVVCITAVSFLFVI
        SFQRAFDQNSIVATVAV+CITAVSFLFVI
Subjt:  SFQRAFDQNSIVATVAVVCITAVSFLFVI

A0A6J1CH44 cold-regulated 413 inner membrane protein 1, chloroplastic-like1.04e-12082.97Show/hide
Query:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGI-----NKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
        MVC+SLSSA SL+  S YK+KLS PLSLRS P +AKLSLN A K+SSICYNPLRFAVG+EGI     NK++SRGL+ VCYAMP+  R +QWISTIS VVL
Subjt:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGI-----NKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL

Query:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAA+LAFQHFSRAG
Subjt:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVVCITAVSFLFVI
        SF+RAFDQNSIVAT AVVC+TA SFL VI
Subjt:  SFQRAFDQNSIVATVAVVCITAVSFLFVI

A0A6J1K0I6 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X25.00e-12183.84Show/hide
Query:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE-----GINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL
        MVCV LSSA+SL+ P  +KSKLS PLSLRSS PNAKL+ N AAKQSSIC NP+RF  GS+      INKK+ RGLSAVCYAMP++ R LQWISTISSV+L
Subjt:  MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE-----GINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVL

Query:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  MLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAG

Query:  SFQRAFDQNSIVATVAVVCITAVSFLFVI
        SF+RAFDQNSIVATVA++C+TAVSFL VI
Subjt:  SFQRAFDQNSIVATVAVVCITAVSFLFVI

SwissProt top hitse value%identityAlignment
F4I1G5 Cold-regulated 413 inner membrane protein 2, chloroplastic7.2e-6056.71Show/hide
Query:  VCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRF-------AVGSEGINKKKSRGLSAVCYAMP-VNTRTLQWISTISSV
        +C+S S  VSL     +  K  + L LR  P N           S +C+NPLR        A  S    K++ RG S VCYA P ++   LQWISTIS V
Subjt:  VCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRF-------AVGSEGINKKKSRGLSAVCYAMP-VNTRTLQWISTISSV

Query:  VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR
         LM A+GTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG I+SL I+ +LAFQHFSR
Subjt:  VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR

Query:  AGSFQRAFDQNSIVATVAVVCITAVSFLFVI
        AG+ Q+AFDQNS++ATVA++ +T VSFLF+I
Subjt:  AGSFQRAFDQNSIVATVAVVCITAVSFLFVI

O23164 Cold-regulated 413 plasma membrane protein 48.6e-1332.87Show/hide
Query:  TRTLQWISTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQ
        T  LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR + 
Subjt:  TRTLQWISTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQ

Query:  EGCIISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVVCI
         G +I L+IA YL  +H   +G F+ +F Q N I  T+ +V +
Subjt:  EGCIISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVVCI

Q94AL8 Cold-regulated 413 inner membrane protein 1, chloroplastic4.7e-5953.25Show/hide
Query:  VCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSS-ICYNPLRF-------AVGSEGINKKKSRGLSAVCYAMPVNTRTLQWISTISSV
        +C+S S  VSL     +  K  + L LRS P +    L+   + +S +C+NPLR        A  S  + K++ RG S VCYA P++  +LQWISTIS +
Subjt:  VCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSS-ICYNPLRF-------AVGSEGINKKKSRGLSAVCYAMPVNTRTLQWISTISSV

Query:  VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR
         LMLA+GTGI KS +VPLFAL AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG II++ I+ +LAFQHFSR
Subjt:  VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR

Query:  AGSFQRAFDQNSIVATVAVVCITAVSFLFVI
        AGS ++A+++ S++ATVA++ +T VS L ++
Subjt:  AGSFQRAFDQNSIVATVAVVCITAVSFLFVI

Q9SVL6 Cold-regulated 413 plasma membrane protein 21.2e-1131.5Show/hide
Query:  LQWISTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGC
        L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RGT  G 
Subjt:  LQWISTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGC

Query:  IISLLIAAYLAFQHFSRAGSFQRAFDQ
        +ISL I  YL  +H   +G F+ +F Q
Subjt:  IISLLIAAYLAFQHFSRAGSFQRAFDQ

Q9XIM7 Cold-regulated 413 plasma membrane protein 11.4e-1031.47Show/hide
Query:  TRTLQWISTISSVVLMLAK----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQ
        T  L+W+++I+++ L++       T +  S ++P      P+ +    +GE G W AF+A++V+LFF       LE+P   +LL +VAP  +    R + 
Subjt:  TRTLQWISTISSVVLMLAK----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQ

Query:  EGCIISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVVCI
         G  I L I  YL  +H   +G F+ AF + N I  TV ++C+
Subjt:  EGCIISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVVCI

Arabidopsis top hitse value%identityAlignment
AT1G29390.1 cold regulated 314 thylakoid membrane 25.1e-6156.71Show/hide
Query:  VCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRF-------AVGSEGINKKKSRGLSAVCYAMP-VNTRTLQWISTISSV
        +C+S S  VSL     +  K  + L LR  P N           S +C+NPLR        A  S    K++ RG S VCYA P ++   LQWISTIS V
Subjt:  VCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRF-------AVGSEGINKKKSRGLSAVCYAMP-VNTRTLQWISTISSV

Query:  VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR
         LM A+GTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG I+SL I+ +LAFQHFSR
Subjt:  VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR

Query:  AGSFQRAFDQNSIVATVAVVCITAVSFLFVI
        AG+ Q+AFDQNS++ATVA++ +T VSFLF+I
Subjt:  AGSFQRAFDQNSIVATVAVVCITAVSFLFVI

AT1G29390.2 cold regulated 314 thylakoid membrane 21.8e-5866.28Show/hide
Query:  RFAVGSEGINKKKSRGLSAVCYAMP-VNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIP
        R A  S    K++ RG S VCYA P ++   LQWISTIS V LM A+GTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+P
Subjt:  RFAVGSEGINKKKSRGLSAVCYAMP-VNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIP

Query:  FISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI
        FI+LLLVIVAPYQV ++RG QEG I+SL I+ +LAFQHFSRAG+ Q+AFDQNS++ATVA++ +T VSFLF+I
Subjt:  FISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI

AT1G29395.1 COLD REGULATED 314 INNER MEMBRANE 13.3e-6053.25Show/hide
Query:  VCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSS-ICYNPLRF-------AVGSEGINKKKSRGLSAVCYAMPVNTRTLQWISTISSV
        +C+S S  VSL     +  K  + L LRS P +    L+   + +S +C+NPLR        A  S  + K++ RG S VCYA P++  +LQWISTIS +
Subjt:  VCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSS-ICYNPLRF-------AVGSEGINKKKSRGLSAVCYAMPVNTRTLQWISTISSV

Query:  VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR
         LMLA+GTGI KS +VPLFAL AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG II++ I+ +LAFQHFSR
Subjt:  VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSR

Query:  AGSFQRAFDQNSIVATVAVVCITAVSFLFVI
        AGS ++A+++ S++ATVA++ +T VS L ++
Subjt:  AGSFQRAFDQNSIVATVAVVCITAVSFLFVI

AT3G50830.1 cold-regulated 413-plasma membrane 28.9e-1331.5Show/hide
Query:  LQWISTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGC
        L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RGT  G 
Subjt:  LQWISTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGC

Query:  IISLLIAAYLAFQHFSRAGSFQRAFDQ
        +ISL I  YL  +H   +G F+ +F Q
Subjt:  IISLLIAAYLAFQHFSRAGSFQRAFDQ

AT4G37220.1 Cold acclimation protein WCOR413 family6.1e-1432.87Show/hide
Query:  TRTLQWISTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQ
        T  LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR + 
Subjt:  TRTLQWISTISSVVLMLAKGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQ

Query:  EGCIISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVVCI
         G +I L+IA YL  +H   +G F+ +F Q N I  T+ +V +
Subjt:  EGCIISLLIAAYLAFQHFSRAGSFQRAFDQ-NSIVATVAVVCI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGTGTATCTCTATCTTCTGCTGTTTCACTTTATATTCCTTCTTTCTACAAATCCAAACTCTCCGTTCCTCTCTCCCTAAGATCTTCACCGCCAAATGCAAAGCT
CTCGTTAAATTCTGCCGCTAAACAGAGTTCAATCTGTTACAATCCGCTCAGGTTTGCTGTCGGTAGCGAGGGTATTAACAAGAAGAAGAGTCGTGGTTTAAGTGCTGTTT
GTTACGCTATGCCTGTTAACACTCGCACTCTTCAGTGGATCTCCACCATTTCTTCTGTGGTTTTAATGCTCGCAAAGGGAACTGGGATTCAGAAGTCATTTATCGTTCCG
CTATTTGCACTTCAGGCGCCTGCAAGTGTTATCTCCTGGATTAAAGGAGAGTACGGCATTTGGAGCGCTTTTCTGGCACTTCTTGTTCGACTGTTCTTCTTCATCCCTGG
TGAATTGGAGATACCATTCATATCACTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGGGGAACTCAAGAAGGGTGCATTATCTCCCTACTGATTGCAG
CATATTTGGCCTTCCAGCATTTCTCTCGAGCAGGCAGCTTTCAGAGAGCTTTTGATCAGAATTCAATTGTTGCAACAGTAGCAGTCGTTTGTATTACCGCTGTTTCATTC
CTGTTCGTGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTGTGTATCTCTATCTTCTGCTGTTTCACTTTATATTCCTTCTTTCTACAAATCCAAACTCTCCGTTCCTCTCTCCCTAAGATCTTCACCGCCAAATGCAAAGCT
CTCGTTAAATTCTGCCGCTAAACAGAGTTCAATCTGTTACAATCCGCTCAGGTTTGCTGTCGGTAGCGAGGGTATTAACAAGAAGAAGAGTCGTGGTTTAAGTGCTGTTT
GTTACGCTATGCCTGTTAACACTCGCACTCTTCAGTGGATCTCCACCATTTCTTCTGTGGTTTTAATGCTCGCAAAGGGAACTGGGATTCAGAAGTCATTTATCGTTCCG
CTATTTGCACTTCAGGCGCCTGCAAGTGTTATCTCCTGGATTAAAGGAGAGTACGGCATTTGGAGCGCTTTTCTGGCACTTCTTGTTCGACTGTTCTTCTTCATCCCTGG
TGAATTGGAGATACCATTCATATCACTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGGGGAACTCAAGAAGGGTGCATTATCTCCCTACTGATTGCAG
CATATTTGGCCTTCCAGCATTTCTCTCGAGCAGGCAGCTTTCAGAGAGCTTTTGATCAGAATTCAATTGTTGCAACAGTAGCAGTCGTTTGTATTACCGCTGTTTCATTC
CTGTTCGTGATCTGA
Protein sequenceShow/hide protein sequence
MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSEGINKKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVP
LFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGCIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSF
LFVI