; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G18594 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G18594
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description60S ribosomal protein L18a-like protein
Genome locationctg3379:1601538..1605163
RNA-Seq ExpressionCucsat.G18594
SyntenyCucsat.G18594
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044804 - AT1G29970-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147407.1 60S ribosomal protein L18a-like protein [Cucumis sativus]5.80e-117100Show/hide
Query:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

XP_008444018.1 PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo]2.76e-11598.74Show/hide
Query:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKS+VVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVA PVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

XP_022140257.1 60S ribosomal protein L18a-like protein [Momordica charantia]1.93e-9784.91Show/hide
Query:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGK++ V GDP SQYHYGTFQGVANYY S  QPQPQPQP SVVGFPQPVA P VSG  P YHGHLGYQAVPVQGYAI+EGRP+QEARLPCCGIGMGW
Subjt:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA++AITFG+T G E W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

XP_022927552.1 60S ribosomal protein L18a-like protein [Cucurbita moschata]3.25e-9583.65Show/hide
Query:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKS+ VFGDP SQYHYGTFQGVANYY+S P+PQPQP PQSVVGFP  VA P      PCYHGHL YQAVPVQGYAI+EGRPF EARLPCCGIGMGW
Subjt:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+ACAIASVLAV+AITFG++ GVE W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

XP_038895475.1 60S ribosomal protein L18a-like protein [Benincasa hispida]7.13e-9988.05Show/hide
Query:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKS+ VFGDP SQYHYGTFQGVANYY+S PQ QPQ    S VGFPQPV    VSGH PCYHGHLGYQAVPVQGYAI+E RPF+EARLPCCGIGMGW
Subjt:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

TrEMBL top hitse value%identityAlignment
A0A0A0M051 Uncharacterized protein2.81e-117100Show/hide
Query:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

A0A1S3B9D9 60S ribosomal protein L18a-like protein1.34e-11598.74Show/hide
Query:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKS+VVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVA PVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

A0A6J1CGC1 60S ribosomal protein L18a-like protein9.33e-9884.91Show/hide
Query:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGK++ V GDP SQYHYGTFQGVANYY S  QPQPQPQP SVVGFPQPVA P VSG  P YHGHLGYQAVPVQGYAI+EGRP+QEARLPCCGIGMGW
Subjt:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA++AITFG+T G E W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

A0A6J1EHH7 60S ribosomal protein L18a-like protein1.57e-9583.65Show/hide
Query:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKS+ VFGDP SQYHYGTFQGVANYY+S P+PQPQP PQSVVGFP  VA P      PCYHGHL YQAVPVQGYAI+EGRPF EARLPCCGIGMGW
Subjt:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+ACAIASVLAV+AITFG++ GVE W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

A0A6J1KIR0 60S ribosomal protein L18a-like protein1.29e-9483.65Show/hide
Query:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MS DGKS+ VFGDP SQYHYGTFQGVANYY+S PQPQPQP PQSVVGFP  VA P      PCYHGHL YQAVPVQGYAI+EGRPF EARLPCCGIGMGW
Subjt:  MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        FLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+ACAIASVLAV+AITFG++ GVE W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

SwissProt top hitse value%identityAlignment
Q8L9S1 60S ribosomal protein L18a-like protein4.5e-3251.05Show/hide
Query:  QYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV
        QY+YGTFQGVAN+ T  P PQ       +  FP    Q  + GH    +   G+  V V  Y ++E RP  E  LPCCG+GMGWFLF++GF  GGIPWY+
Subjt:  QYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV

Query:  GAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        GAFIVL   VD+REK GYVAC+IASV+ +IA+  G+T  +  W
Subjt:  GAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

Arabidopsis top hitse value%identityAlignment
AT1G17080.1 Ribosomal protein L18ae family4.6e-4053.8Show/hide
Query:  DGKSNVVFGDPHSQYH-YGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFL
        + KS     +  +Q+H YGTFQGV+NY   PP     P    V GFPQP A P V      Y+ H GYQ VPV G  + EGRP ++ RLPCCGIG+GWFL
Subjt:  DGKSNVVFGDPHSQYH-YGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFL

Query:  FMIGFFLGGIPWYVGAFIVLF-VRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        F++GFFLG IPWYVG FI++F  R+DYREKPGY+AC IA++LA IA+  G++ G + W
Subjt:  FMIGFFLGGIPWYVGAFIVLF-VRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

AT1G29970.1 60S ribosomal protein L18A-13.2e-3351.05Show/hide
Query:  QYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV
        QY+YGTFQGVAN+ T  P PQ       +  FP    Q  + GH    +   G+  V V  Y ++E RP  E  LPCCG+GMGWFLF++GF  GGIPWY+
Subjt:  QYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV

Query:  GAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        GAFIVL   VD+REK GYVAC+IASV+ +IA+  G+T  +  W
Subjt:  GAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

AT1G29970.2 60S ribosomal protein L18A-11.4e-2853.23Show/hide
Query:  QYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV
        QY+YGTFQGVAN+ T  P PQ       +  FP    Q  + GH    +   G+  V V  Y ++E RP  E  LPCCG+GMGWFLF++GF  GGIPWY+
Subjt:  QYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV

Query:  GAFIVLFVRVDYREKPGYVACAIA
        GAFIVL   VD+REK GYVAC+IA
Subjt:  GAFIVLFVRVDYREKPGYVACAIA

AT1G29970.3 60S ribosomal protein L18A-14.5e-2739.46Show/hide
Query:  QYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFL--------------
        QY+YGTFQGVAN+ T  P PQ       +  FP    Q  + GH    +   G+  V V  Y ++E RP  E  LPCCG+GMGWFL              
Subjt:  QYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFL--------------

Query:  ----------------------------FMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
                                    F++GF  GGIPWY+GAFIVL   VD+REK GYVAC+IASV+ +IA+  G+T  +  W
Subjt:  ----------------------------FMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW

AT1G53560.1 Ribosomal protein L18ae family1.4e-3350.71Show/hide
Query:  YGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYVGAF
        YGTFQGV  Y   PP     P    V+G PQP   P    H    H ++  +   V GY + +GRP ++ RLPCCG+G+GWFLF+IGF LG IPWYVG F
Subjt:  YGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYVGAF

Query:  IVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW
        I++  R+D REKPGYVAC IA+V+A I I FG+  G   W
Subjt:  IVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGCGACGGGAAAAGCAACGTGGTATTCGGCGATCCACATAGTCAATACCATTACGGTACGTTTCAGGGTGTTGCGAACTATTATACTTCTCCTCCACAACCGCA
GCCGCAGCCCCAGCCCCAATCTGTCGTCGGTTTCCCTCAGCCGGTTGCGCAACCCGTTGTTTCTGGTCATCAGCCATGCTACCATGGACATCTGGGTTACCAAGCCGTTC
CTGTTCAAGGTTATGCTATTCTTGAGGGAAGACCTTTTCAAGAAGCCCGTCTTCCTTGCTGTGGCATTGGCATGGGCTGGTTCTTGTTTATGATTGGCTTCTTTCTTGGT
GGCATTCCCTGGTATGTTGGAGCTTTTATTGTACTCTTTGTACGGGTCGATTACCGAGAAAAGCCTGGATATGTTGCATGTGCAATTGCTTCAGTTCTTGCTGTCATAGC
TATAACATTTGGTATCACCAACGGAGTTGAGCCCTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGGCGACGGGAAAAGCAACGTGGTATTCGGCGATCCACATAGTCAATACCATTACGGTACGTTTCAGGGTGTTGCGAACTATTATACTTCTCCTCCACAACCGCA
GCCGCAGCCCCAGCCCCAATCTGTCGTCGGTTTCCCTCAGCCGGTTGCGCAACCCGTTGTTTCTGGTCATCAGCCATGCTACCATGGACATCTGGGTTACCAAGCCGTTC
CTGTTCAAGGTTATGCTATTCTTGAGGGAAGACCTTTTCAAGAAGCCCGTCTTCCTTGCTGTGGCATTGGCATGGGCTGGTTCTTGTTTATGATTGGCTTCTTTCTTGGT
GGCATTCCCTGGTATGTTGGAGCTTTTATTGTACTCTTTGTACGGGTCGATTACCGAGAAAAGCCTGGATATGTTGCATGTGCAATTGCTTCAGTTCTTGCTGTCATAGC
TATAACATTTGGTATCACCAACGGAGTTGAGCCCTGGTGA
Protein sequenceShow/hide protein sequence
MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLG
GIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW