; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G18598 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G18598
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationctg3379:1790434..1791353
RNA-Seq ExpressionCucsat.G18598
SyntenyCucsat.G18598
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0006367 - transcription initiation from RNA polymerase II promoter (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0015074 - DNA integration (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0005673 - transcription factor TFIIE complex (cellular component)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0047938 - glucose-6-phosphate 1-epimerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147416.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus]1.75e-193100Show/hide
Query:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

XP_008444193.1 PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo]3.26e-18997.74Show/hide
Query:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAAS+MALSSPS AGK VKLTPSSPELFGNSRV MRKSA KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

XP_022142169.1 chlorophyll a-b binding protein of LHCII type 1-like [Momordica charantia]5.18e-18695.85Show/hide
Query:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAAS+MALSSPS AGK VKLTPSSPEL GN RV+MRK  +KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

XP_023001458.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima]3.00e-18596.23Show/hide
Query:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAAS+MALSSPS AGK VKLTPSS EL GN RV+MRKSA KSVSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

XP_038877609.1 chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]5.38e-18696.24Show/hide
Query:  MAASSMALSSPSFAGKVVKLTPSSPELFGNS-RVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MAAS+MALSSPS AGK VKLTPSSPEL GN  RV+MRKSA+KS+SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
Subjt:  MAASSMALSSPSFAGKVVKLTPSSPELFGNS-RVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGL
        IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGL
Subjt:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGL

Query:  ADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        ADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPVNNNAWAYATNFVPGK
Subjt:  ADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

TrEMBL top hitse value%identityAlignment
A0A0A0LX23 Chlorophyll a-b binding protein, chloroplastic8.49e-194100Show/hide
Query:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

A0A1S3BAK6 Chlorophyll a-b binding protein, chloroplastic1.58e-18997.74Show/hide
Query:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAAS+MALSSPS AGK VKLTPSSPELFGNSRV MRKSA KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

A0A5D3DAQ5 Chlorophyll a-b binding protein, chloroplastic1.58e-18997.74Show/hide
Query:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAAS+MALSSPS AGK VKLTPSSPELFGNSRV MRKSA KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

A0A6J1CKT5 Chlorophyll a-b binding protein, chloroplastic2.51e-18695.85Show/hide
Query:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAAS+MALSSPS AGK VKLTPSSPEL GN RV+MRK  +KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

A0A6J1KQK6 Chlorophyll a-b binding protein, chloroplastic1.45e-18596.23Show/hide
Query:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAAS+MALSSPS AGK VKLTPSS EL GN RV+MRKSA KSVSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA
        HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

SwissProt top hitse value%identityAlignment
P07369 Chlorophyll a-b binding protein 3C, chloroplastic1.7e-14090.64Show/hide
Query:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        MA S+MALSS +FAGK VKL+PSS E+ GN RVTMRK+ATK+   SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Subjt:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLG
        VIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGEV DP+YPGGSFDPLG
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        LADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPVNNNAWA+ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

P08221 Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment)2.0e-14193.33Show/hide
Query:  PSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL
        P+ AG+ VKL+P++PE+ GN++ TMRK+A+KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL
Subjt:  PSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL

Query:  GCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELK
        GCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELK
Subjt:  GCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELK

Query:  VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPVNNNAWAYATNFVPGK
Subjt:  VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

P09756 Chlorophyll a-b binding protein 3, chloroplastic1.8e-14293.56Show/hide
Query:  AASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH
        AASSMALSSPS AGK VKL PS+PE+    RV+MRK+ TK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH
Subjt:  AASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH

Query:  SRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAD
        SRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA+QV+LMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAD
Subjt:  SRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAD

Query:  DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL  PVNNNAWAYATNFVPGK
Subjt:  DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

P27493 Chlorophyll a-b binding protein 21, chloroplastic5.8e-14189.43Show/hide
Query:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAA++MALSSPSFAG+ VKL+PS+PE+ GN RV+MRK+  K V+S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Subjt:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA
        H RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLA
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA

Query:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        +DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPVNNNAWAYATNFVPGK
Subjt:  DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

P27495 Chlorophyll a-b binding protein 40, chloroplastic8.9e-14291.01Show/hide
Query:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSAT--KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        MAAS+MALSSPSFAGK VKL+PSS E+ GN +VTMRK+A+  K+VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Subjt:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSAT--KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLG
        VIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AGGPLGEV DP+YPGGSFDPLG
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        LA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPVNNNAWAYATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 31.8e-13486.14Show/hide
Query:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MAAS+MALSSP+FAGK V L+P++ E+ G+ RVTMRK+  K    SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEV
Subjt:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLG
        IHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLG
Subjt:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        LA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHL DPVNNNAWA+ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

AT1G29920.1 chlorophyll A/B-binding protein 21.8e-13486.14Show/hide
Query:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MAAS+MALSSP+FAGK V L+P++ E+ G+ RVTMRK+  K    SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEV
Subjt:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLG
        IHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLG
Subjt:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        LA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHL DPVNNNAWA+ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

AT1G29930.1 chlorophyll A/B binding protein 14.9e-13586.52Show/hide
Query:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MAAS+MALSSP+FAGK VKL+P++ E+ G+ RVTMRK+  K    SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEV
Subjt:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLG
        IHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLG
Subjt:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        LA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHL DPVNNNAWA+ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

AT2G34420.1 photosystem II light harvesting complex gene B1B21.6e-13386.14Show/hide
Query:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MA+S+MALSSP+FAGK VK  P++ ++ G+ RVTMRK+  K    SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEV
Subjt:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLG
        IHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLG
Subjt:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        LA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPVNNNAWA+ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK

AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B13.4e-13686.47Show/hide
Query:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
        MAAS+MALSSP+  GK VKL+P++ E+FG  R+TMRK++  +  SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVI
Subjt:  MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI

Query:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGL
        HSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLGL
Subjt:  HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGL

Query:  ADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK
        A DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL DPVNNNAWA+ATNFVPGK
Subjt:  ADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCTCAAGCATGGCTCTATCCTCCCCCTCTTTCGCCGGAAAGGTGGTGAAACTCACCCCTTCCTCCCCCGAGCTTTTCGGCAACAGCAGAGTCACCATGAGGAA
ATCTGCCACCAAGTCGGTTTCTTCTGGAAGCCCATGGTACGGACCTGACCGTGTTAAGTATTTGGGCCCATTCTCCGGCGAGCCTCCATCCTATCTTACTGGAGAATTCC
CGGGTGACTATGGTTGGGATACTGCTGGACTTTCTGCTGATCCTGAGACCTTTGCCAAGAACCGTGAACTTGAAGTCATCCACTCTAGGTGGGCTATGCTTGGAGCATTG
GGTTGCGTGTTCCCAGAGCTTCTTTCCCGCAACGGTGTGAAGTTCGGAGAAGCAGTATGGTTCAAAGCCGGTTCTCAGATTTTCAGCGAAGGTGGACTCGACTACTTAGG
AAACCCAAGTTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCCCAAGTTGTTCTCATGGGGGCCGTCGAGGGATACCGTATTGCCGGTGGTCCACTAGGGGAGG
TGACCGATCCCATCTACCCAGGCGGGAGCTTTGACCCATTGGGACTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGCTGAAGAATGGAAGATTAGCT
ATGTTCTCCATGTTTGGATTCTTCGTTCAAGCTATTGTCACTGGAAAGGGTCCACTAGAGAATCTTGCGGACCATCTTACTGACCCAGTCAACAACAATGCTTGGGCTTA
CGCTACCAACTTTGTTCCTGGAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCTCAAGCATGGCTCTATCCTCCCCCTCTTTCGCCGGAAAGGTGGTGAAACTCACCCCTTCCTCCCCCGAGCTTTTCGGCAACAGCAGAGTCACCATGAGGAA
ATCTGCCACCAAGTCGGTTTCTTCTGGAAGCCCATGGTACGGACCTGACCGTGTTAAGTATTTGGGCCCATTCTCCGGCGAGCCTCCATCCTATCTTACTGGAGAATTCC
CGGGTGACTATGGTTGGGATACTGCTGGACTTTCTGCTGATCCTGAGACCTTTGCCAAGAACCGTGAACTTGAAGTCATCCACTCTAGGTGGGCTATGCTTGGAGCATTG
GGTTGCGTGTTCCCAGAGCTTCTTTCCCGCAACGGTGTGAAGTTCGGAGAAGCAGTATGGTTCAAAGCCGGTTCTCAGATTTTCAGCGAAGGTGGACTCGACTACTTAGG
AAACCCAAGTTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCCCAAGTTGTTCTCATGGGGGCCGTCGAGGGATACCGTATTGCCGGTGGTCCACTAGGGGAGG
TGACCGATCCCATCTACCCAGGCGGGAGCTTTGACCCATTGGGACTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGCTGAAGAATGGAAGATTAGCT
ATGTTCTCCATGTTTGGATTCTTCGTTCAAGCTATTGTCACTGGAAAGGGTCCACTAGAGAATCTTGCGGACCATCTTACTGACCCAGTCAACAACAATGCTTGGGCTTA
CGCTACCAACTTTGTTCCTGGAAAATGA
Protein sequenceShow/hide protein sequence
MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL
GCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLA
MFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK