CuGenDBv2

Gene ID	Cucsat.G18655
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	protein DEFECTIVE IN MERISTEM SILENCING 3
Genome location	ctg3379:796561..797164
RNA-Seq Expression	Cucsat.G18655
Synteny	Cucsat.G18655
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

ADN33744.1 hypothetical protein [Cucumis melo subsp. melo]

3.67e-101

94.41

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Query:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL
        M AIVCKTYNGVKSLEKYDT+G IN+TSGLHGFGTSLGKTLEGRFNVISLETLR YSGEFVA+DPQRRL IPKPRLPNGDCPAGFLGYAVNMI+IDRTHL
Subjt:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL

Query:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR
        FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVP ITDGALSLDGGIIKRSGLFCLGNR
Subjt:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR

KAA0050512.1 protein DEFECTIVE IN MERISTEM SILENCING 3 [Cucumis melo var. makuwa]

2.27e-103

94.41

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Query:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL
        M AIVCKTYNGVKSLEKYDT+G IN+TSGLHGFGTSLGKTLEGRFNVISLETLR YSGEFVA+DPQRRL IPKPRLPNGDCPAGFLGYAVNMI+IDRTHL
Subjt:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL

Query:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR
        FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVP ITDGALSLDGGIIKRSGLFCLGNR
Subjt:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR

XP_004146267.2 protein DEFECTIVE IN MERISTEM SILENCING 3 [Cucumis sativus]

1.88e-104

95.65

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Query:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL
        MLAIVCKTYNGVKSLEKYDTEGCIN+TSGLHGFGTSLGKTLEGRFNVI+LETLRSYSGEFVA+DPQRRL IPKPRLPNGDCP GFLGYAVNMIDIDRTHL
Subjt:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL

Query:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR
         FLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVP ITDGALSLDGGIIKRSGLFCLGNR
Subjt:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR

XP_008466829.1 PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3 [Cucumis melo]

2.48e-102

94.41

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Query:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL
        M AIVCKTYNGVKSLEKYDT+G IN+TSGLHGFGTSLGKTLEGRFNVISLETLR YSGEFVA+DPQRRL IPKPRLPNGDCPAGFLGYAVNMI+IDRTHL
Subjt:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL

Query:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR
        FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVP ITDGALSLDGGIIKRSGLFCLGNR
Subjt:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR

XP_011648506.2 protein DEFECTIVE IN MERISTEM SILENCING 3 [Cucumis sativus]

6.06e-111

100

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Query:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL
        MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL
Subjt:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL

Query:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR
        FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR
Subjt:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6R1 Uncharacterized protein

5.85e-104

95.65

Show/hide

Query:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL
        MLAIVCKTYNGVKSLEKYDTEGCIN+TSGLHGFGTSLGKTLEGRFNVI+LETLRSYSGEFVA+DPQRRL IPKPRLPNGDCP GFLGYAVNMIDIDRTHL
Subjt:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL

Query:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR
         FLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVP ITDGALSLDGGIIKRSGLFCLGNR
Subjt:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR

A0A0A0LXU9 Uncharacterized protein

1.20e-109

98.76

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Query:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL
        MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVI+LETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL
Subjt:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL

Query:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR
        FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVP ITDGALSLDGGIIKRSGLFCLGNR
Subjt:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR

A0A1S3CS36 protein DEFECTIVE IN MERISTEM SILENCING 3

1.20e-102

94.41

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Query:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL
        M AIVCKTYNGVKSLEKYDT+G IN+TSGLHGFGTSLGKTLEGRFNVISLETLR YSGEFVA+DPQRRL IPKPRLPNGDCPAGFLGYAVNMI+IDRTHL
Subjt:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL

Query:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR
        FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVP ITDGALSLDGGIIKRSGLFCLGNR
Subjt:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR

A0A5A7U3X9 Protein DEFECTIVE IN MERISTEM SILENCING 3

1.10e-103

94.41

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Query:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL
        M AIVCKTYNGVKSLEKYDT+G IN+TSGLHGFGTSLGKTLEGRFNVISLETLR YSGEFVA+DPQRRL IPKPRLPNGDCPAGFLGYAVNMI+IDRTHL
Subjt:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL

Query:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR
        FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVP ITDGALSLDGGIIKRSGLFCLGNR
Subjt:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR

A0A5D3DZ76 Protein DEFECTIVE IN MERISTEM SILENCING 3

1.78e-101

94.41

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Query:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL
        M AIVCKTYNGVKSLEKYDT+G IN+TSGLHGFGTSLGKTLEGRFNVISLETLR YSGEFVA+DPQRRL IPKPRLPNGDCPAGFLGYAVNMI+IDRTHL
Subjt:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL

Query:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR
        FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVP ITDGALSLDGGIIKRSGLFCLGNR
Subjt:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR

SwissProt top hits

e value

%identity

Alignment

F4KFS5 Structural maintenance of chromosomes flexible hinge domain-containing protein GMI1

3.7e-26

44.17

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Query:  MLAIVCKTYN-GVKSLE--KYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDR
        ML++VCK+   G KS E  K+ +E              SLG+++  RF VI L+  R +    V NDPQ+RL +  P LPNGD   GF GYAVNMID+  
Subjt:  MLAIVCKTYN-GVKSLE--KYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDR

Query:  THLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDG-ALSLDGGIIKRSGLFCLG
          L   ++SGYGLRETLFY +F  LQ+Y+T   +  A+P I  G A+SLDG I + +G    G
Subjt:  THLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDG-ALSLDGGIIKRSGLFCLG

Q94A79 Protein DEFECTIVE IN MERISTEM SILENCING 3

2.9e-50

57.14

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Query:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL
        MLA+VC+ Y  V +LE YD  G I+  +GLH  G+S+G+ +   F+ I LE LR Y G+ +A+D QRRL + KP+LPNG+CP GFLG+AVNMI ID  +L
Subjt:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL

Query:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR
          +T+ GYGLRETLFY+LF  LQ+YKTR +M+ A+P I+DGA+SLDGGII+++G+F LGNR
Subjt:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR

Arabidopsis top hits

e value

%identity

Alignment

AT3G49250.1 defective in meristem silencing 3

2.0e-51

57.14

Show/hide

Query:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL
        MLA+VC+ Y  V +LE YD  G I+  +GLH  G+S+G+ +   F+ I LE LR Y G+ +A+D QRRL + KP+LPNG+CP GFLG+AVNMI ID  +L
Subjt:  MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHL

Query:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR
          +T+ GYGLRETLFY+LF  LQ+YKTR +M+ A+P I+DGA+SLDGGII+++G+F LGNR
Subjt:  FFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR

AT5G24280.1 gamma-irradiation and mitomycin c induced 1

2.7e-27

44.17

Show/hide

Query:  MLAIVCKTYN-GVKSLE--KYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDR
        ML++VCK+   G KS E  K+ +E              SLG+++  RF VI L+  R +    V NDPQ+RL +  P LPNGD   GF GYAVNMID+  
Subjt:  MLAIVCKTYN-GVKSLE--KYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDR

Query:  THLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDG-ALSLDGGIIKRSGLFCLG
          L   ++SGYGLRETLFY +F  LQ+Y+T   +  A+P I  G A+SLDG I + +G    G
Subjt:  THLFFLTASGYGLRETLFYSLFFCLQIYKTRTEMLQAVPFITDG-ALSLDGGIIKRSGLFCLG

Sequences

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CDS sequence

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ATGTTGGCTATTGTCTGCAAGACTTACAATGGAGTCAAATCTCTGGAAAAGTATGACACGGAAGGATGCATAAATGAAACATCCGGGCTTCATGGATTTGGCACTTCACT
CGGGAAAACTTTAGAGGGACGATTCAATGTCATCTCTCTCGAAACGTTAAGATCATATTCTGGTGAATTTGTGGCCAATGATCCGCAAAGAAGGCTTCATATTCCAAAGC
CAAGATTGCCTAATGGAGACTGTCCAGCCGGTTTTCTTGGTTATGCTGTTAATATGATTGACATAGACAGAACACACTTGTTTTTTCTCACAGCTAGTGGATATGGTCTT
AGAGAGACTCTATTTTATTCTCTATTTTTCTGCCTGCAAATCTATAAAACTAGGACAGAAATGTTGCAAGCTGTTCCCTTTATAACCGACGGAGCGCTTTCTTTGGATGG
CGGGATTATCAAGAGGAGTGGATTGTTTTGTCTTGGCAATAGG

mRNA sequence

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Protein sequence

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MLAIVCKTYNGVKSLEKYDTEGCINETSGLHGFGTSLGKTLEGRFNVISLETLRSYSGEFVANDPQRRLHIPKPRLPNGDCPAGFLGYAVNMIDIDRTHLFFLTASGYGL
RETLFYSLFFCLQIYKTRTEMLQAVPFITDGALSLDGGIIKRSGLFCLGNR

Cucsat.G18655 (gene) of Cucumber (B10) v3 genome