| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0040613.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 5.42e-58 | 70.34 | Show/hide |
Query: MKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFLH
MKEE+TTIEKNGTWKMV+ +GK+AIDLKWV+KTKF ADG LEK+KARLVAKG+ QQHG +FE+TFS +A FE V++VLALAAQ+QWSVYQFDVK FL+
Subjt: MKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFLH
Query: GELQEEVYVGQPEGFVIEGSKEKVYKLTKALYGFETYEKVLNMLC
EL+EEVYV QP+GFV + S+EKVYKLTKALYG + + M C
Subjt: GELQEEVYVGQPEGFVIEGSKEKVYKLTKALYGFETYEKVLNMLC
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| KAA0050371.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.11e-59 | 72.79 | Show/hide |
Query: PMKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFL
P + + TIEKNGTWKMV+ SE K+AI LKWV+KTKF G LEK+KARLVAKGY QQHG DFE+ FS +A FE V+IVLALAAQ+QWS+YQFDVK AFL
Subjt: PMKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFL
Query: HGELQEEVYVGQPEGFVIEGSKEKVYKLTKALYGFE
+GELQEEVYV QPEGFV + S+EKVYKLTKALYG +
Subjt: HGELQEEVYVGQPEGFVIEGSKEKVYKLTKALYGFE
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| KAA0054939.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | 7.62e-59 | 74.64 | Show/hide |
Query: QQPMKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLA
Q+ MKEE+ IEKNGTWKMV+ EGK+AI LKWV+K+KF ADG LEK+KA LVAKG+ QQHG DFE+TFS +A FE V+IVLALAAQ+QWSVYQFDVK A
Subjt: QQPMKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLA
Query: FLHGELQEEVYVGQPEGFVIEGSKEKVYKLTKALYGFE
FL+GELQEEVYV QPEGFV + S+EKVYKLTKALYG +
Subjt: FLHGELQEEVYVGQPEGFVIEGSKEKVYKLTKALYGFE
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| KAA0066378.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.23e-69 | 71.6 | Show/hide |
Query: KHWMSCHLGGSDPWRTSIILLNLPLWFLTRCVMMRQQPMKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDF
+H M+ HL G PW+ SIILLNL LWFLT+C+MMRQQ MKEE+ IEKNGTWKMV+ EGK+AI LKWV+K+KF ADG LEK+KA LVAKGY QQHG DF
Subjt: KHWMSCHLGGSDPWRTSIILLNLPLWFLTRCVMMRQQPMKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDF
Query: EKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFLHGELQEEVYVGQPEGFVIEGSKEKV
++T S IA FE VKIVLAL A +QW VYQFDVK AFL+GELQEEVYV QPEGFV + S+EKV
Subjt: EKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFLHGELQEEVYVGQPEGFVIEGSKEKV
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| TYK00906.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | 1.66e-68 | 71.6 | Show/hide |
Query: KHWMSCHLGGSDPWRTSIILLNLPLWFLTRCVMMRQQPMKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDF
+H M+ HL G PW+ SIILLNL LWFLT+C+MMRQQ MKEE+ IEKNGTWKMV+ EGK+AI LKWV+K+KF ADG LEK+KA LVAKGY QQHG DF
Subjt: KHWMSCHLGGSDPWRTSIILLNLPLWFLTRCVMMRQQPMKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDF
Query: EKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFLHGELQEEVYVGQPEGFVIEGSKEKV
++T S IA FE VKIVLAL A +QW VYQFDVK AFL+GELQEEVYV QPEGFV + S+EKV
Subjt: EKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFLHGELQEEVYVGQPEGFVIEGSKEKV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TC06 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.62e-58 | 70.34 | Show/hide |
Query: MKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFLH
MKEE+TTIEKNGTWKMV+ +GK+AIDLKWV+KTKF ADG LEK+KARLVAKG+ QQHG +FE+TFS +A FE V++VLALAAQ+QWSVYQFDVK FL+
Subjt: MKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFLH
Query: GELQEEVYVGQPEGFVIEGSKEKVYKLTKALYGFETYEKVLNMLC
EL+EEVYV QP+GFV + S+EKVYKLTKALYG + + M C
Subjt: GELQEEVYVGQPEGFVIEGSKEKVYKLTKALYGFETYEKVLNMLC
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| A0A5A7UN91 Putative gag-pol polyprotein, identical | 3.69e-59 | 74.64 | Show/hide |
Query: QQPMKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLA
Q+ MKEE+ IEKNGTWKMV+ EGK+AI LKWV+K+KF ADG LEK+KA LVAKG+ QQHG DFE+TFS +A FE V+IVLALAAQ+QWSVYQFDVK A
Subjt: QQPMKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLA
Query: FLHGELQEEVYVGQPEGFVIEGSKEKVYKLTKALYGFE
FL+GELQEEVYV QPEGFV + S+EKVYKLTKALYG +
Subjt: FLHGELQEEVYVGQPEGFVIEGSKEKVYKLTKALYGFE
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| A0A5A7VF84 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.56e-69 | 71.6 | Show/hide |
Query: KHWMSCHLGGSDPWRTSIILLNLPLWFLTRCVMMRQQPMKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDF
+H M+ HL G PW+ SIILLNL LWFLT+C+MMRQQ MKEE+ IEKNGTWKMV+ EGK+AI LKWV+K+KF ADG LEK+KA LVAKGY QQHG DF
Subjt: KHWMSCHLGGSDPWRTSIILLNLPLWFLTRCVMMRQQPMKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDF
Query: EKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFLHGELQEEVYVGQPEGFVIEGSKEKV
++T S IA FE VKIVLAL A +QW VYQFDVK AFL+GELQEEVYV QPEGFV + S+EKV
Subjt: EKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFLHGELQEEVYVGQPEGFVIEGSKEKV
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| A0A5D3BRM6 Putative gag-pol polyprotein, identical | 8.05e-69 | 71.6 | Show/hide |
Query: KHWMSCHLGGSDPWRTSIILLNLPLWFLTRCVMMRQQPMKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDF
+H M+ HL G PW+ SIILLNL LWFLT+C+MMRQQ MKEE+ IEKNGTWKMV+ EGK+AI LKWV+K+KF ADG LEK+KA LVAKGY QQHG DF
Subjt: KHWMSCHLGGSDPWRTSIILLNLPLWFLTRCVMMRQQPMKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDF
Query: EKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFLHGELQEEVYVGQPEGFVIEGSKEKV
++T S IA FE VKIVLAL A +QW VYQFDVK AFL+GELQEEVYV QPEGFV + S+EKV
Subjt: EKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFLHGELQEEVYVGQPEGFVIEGSKEKV
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| A0A5D3BWT3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.39e-60 | 72.79 | Show/hide |
Query: PMKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFL
P + + TIEKNGTWKMV+ SE K+AI LKWV+KTKF G LEK+KARLVAKGY QQHG DFE+ FS +A FE V+IVLALAAQ+QWS+YQFDVK AFL
Subjt: PMKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFL
Query: HGELQEEVYVGQPEGFVIEGSKEKVYKLTKALYGFE
+GELQEEVYV QPEGFV + S+EKVYKLTKALYG +
Subjt: HGELQEEVYVGQPEGFVIEGSKEKVYKLTKALYGFE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.3e-21 | 36.84 | Show/hide |
Query: QQPMKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLA
++ + E+ + N TW + + E K+ +D +WVF K+ G +YKARLVA+G+ Q++ D+E+TF+ +A + + +L+L Q V+Q DVK A
Subjt: QQPMKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLA
Query: FLHGELQEEVYVGQPEGFVIEGSKEKVYKLTKALYG--------FETYEKVL
FL+G L+EE+Y+ P+G I + + V KL KA+YG FE +E+ L
Subjt: FLHGELQEEVYVGQPEGFVIEGSKEKVYKLTKALYG--------FETYEKVL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.1e-30 | 48.89 | Show/hide |
Query: MKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFLH
M+EE+ +++KNGT+K+VE +GK + KWVFK K D L +YKARLV KG+ Q+ G DF++ FS + +++ +L+LAA V Q DVK AFLH
Subjt: MKEEITTIEKNGTWKMVE-SEGKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFLH
Query: GELQEEVYVGQPEGFVIEGSKEKVYKLTKALYGFE
G+L+EE+Y+ QPEGF + G K V KL K+LYG +
Subjt: GELQEEVYVGQPEGFVIEGSKEKVYKLTKALYGFE
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 4.9e-11 | 39.53 | Show/hide |
Query: QPMKEEITTIEKNGTWKMVESE-GKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQ
Q M+EE+ + +N TW +V ++ + KWVFKTK +DG L++ KARLVAKG+ Q+ G F +T+S + ++ +L +A Q
Subjt: QPMKEEITTIEKNGTWKMVESE-GKSAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQ
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.6e-24 | 36.78 | Show/hide |
Query: KHWMSCHLGGSDPWRTSIILLNLPLWFLTRCVMMRQQPMKEEITTIEKNGTWKMVESEGK--SAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSD
K+ ++ L RT+I L W + M EI N TW +V + + +W+F K+ +DG L +YKARLVAKGY Q+ G D
Subjt: KHWMSCHLGGSDPWRTSIILLNLPLWFLTRCVMMRQQPMKEEITTIEKNGTWKMVESEGK--SAIDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSD
Query: FEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFLHGELQEEVYVGQPEGFVIEGSKEKVYKLTKALYGFE
+ +TFS + +++IVL +A R W + Q DV AFL G L ++VY+ QP GF+ + V KL KALYG +
Subjt: FEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKLAFLHGELQEEVYVGQPEGFVIEGSKEKVYKLTKALYGFE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.7e-24 | 43.17 | Show/hide |
Query: QQPMKEEITTIEKNGTWKMVESEGKSA--IDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKL
+Q M EI N TW +V S + +W+F KF +DG L +YKARLVAKGY Q+ G D+ +TFS + +++IVL +A R W + Q DV
Subjt: QQPMKEEITTIEKNGTWKMVESEGKSA--IDLKWVFKTKFVADGILEKYKARLVAKGYVQQHGSDFEKTFSSIAHFENVKIVLALAAQRQWSVYQFDVKL
Query: AFLHGELQEEVYVGQPEGFVIEGSKEKVYKLTKALYGFE
AFL G L +EVY+ QP GFV + + V +L KA+YG +
Subjt: AFLHGELQEEVYVGQPEGFVIEGSKEKVYKLTKALYGFE
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