; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G18828 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G18828
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionSpc97 / Spc98 family of spindle pole body (SBP) component
Genome locationctg3412:1138194..1143196
RNA-Seq ExpressionCucsat.G18828
SyntenyCucsat.G18828
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0005319 - lipid transporter activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055731.1 hypothetical protein E6C27_scaffold181G001160 [Cucumis melo var. makuwa]2.46e-7273.41Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKI
        MEEANEILKNNR+EDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+TLRAIGFVLMEHLKG+LRTSDVSDLSQS T NACNLLDSN+EKI
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKI

Query:  LSIDEIMASICSDRRKKPGKRLVPFTSSCVCIVQDHILERIVKCHVNYCFVILIFHINREKKLSTTTLTFWYS
        LSIDEIMASICSDRRKKPGKR                                       KKL TTTLTFWYS
Subjt:  LSIDEIMASICSDRRKKPGKRLVPFTSSCVCIVQDHILERIVKCHVNYCFVILIFHINREKKLSTTTLTFWYS

XP_008450999.1 PREDICTED: uncharacterized protein LOC103492413 [Cucumis melo]3.40e-7195.04Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKI
        MEEANEILKNNR+EDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+TLRAIGFVLMEHLKG+LRTSDVSDLSQS T NACNLLDSN+EKI
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKI

Query:  LSIDEIMASICSDRRKKPGKR
        LSIDEIMASICSDRRKKPGKR
Subjt:  LSIDEIMASICSDRRKKPGKR

XP_008460383.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo]1.66e-6891.67Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL
        MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+TLR IGFVLMEHLKG+LRTSDV+DLSQS  NACNLLDSNLEK L
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKR
         IDEIM SIC DRRKKPGKR
Subjt:  SIDEIMASICSDRRKKPGKR

XP_011651663.2 uncharacterized protein LOC101210446 [Cucumis sativus]1.81e-75100Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL
        MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKR
        SIDEIMASICSDRRKKPGKR
Subjt:  SIDEIMASICSDRRKKPGKR

XP_011653427.1 uncharacterized protein LOC105435221 [Cucumis sativus]9.08e-6992.5Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL
        MEEANEILKN RIE ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDL+  RAIGFVLMEHLKG+LRTSDVSDLSQS  NACNLLDSNLEKIL
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKR
        SIDEIMASICSDRRKKPGKR
Subjt:  SIDEIMASICSDRRKKPGKR

TrEMBL top hitse value%identityAlignment
A0A0A0KW48 Uncharacterized protein1.28e-6692.5Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL
        MEEANEILKN RIE ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDL+  RAIGFVLMEHLKG+LRTSDVSDLSQS  NACNLLDSNLEKIL
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKR
        SIDEIMASICSDRRKKPGKR
Subjt:  SIDEIMASICSDRRKKPGKR

A0A0A0LBP9 Uncharacterized protein5.72e-7398.33Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL
        MEEANEILKN RIE ISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKR
        SIDEIMASICSDRRKKPGKR
Subjt:  SIDEIMASICSDRRKKPGKR

A0A1S3BQH9 uncharacterized protein LOC1034924131.64e-7195.04Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKI
        MEEANEILKNNR+EDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+TLRAIGFVLMEHLKG+LRTSDVSDLSQS T NACNLLDSN+EKI
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKI

Query:  LSIDEIMASICSDRRKKPGKR
        LSIDEIMASICSDRRKKPGKR
Subjt:  LSIDEIMASICSDRRKKPGKR

A0A1S3CBX7 uncharacterized protein LOC1034992208.03e-6991.67Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL
        MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+TLR IGFVLMEHLKG+LRTSDV+DLSQS  NACNLLDSNLEK L
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKR
         IDEIM SIC DRRKKPGKR
Subjt:  SIDEIMASICSDRRKKPGKR

A0A5A7UQA1 Uncharacterized protein1.19e-7273.41Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKI
        MEEANEILKNNR+EDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDL+TLRAIGFVLMEHLKG+LRTSDVSDLSQS T NACNLLDSN+EKI
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQS-TFNACNLLDSNLEKI

Query:  LSIDEIMASICSDRRKKPGKRLVPFTSSCVCIVQDHILERIVKCHVNYCFVILIFHINREKKLSTTTLTFWYS
        LSIDEIMASICSDRRKKPGKR                                       KKL TTTLTFWYS
Subjt:  LSIDEIMASICSDRRKKPGKRLVPFTSSCVCIVQDHILERIVKCHVNYCFVILIFHINREKKLSTTTLTFWYS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G80245.1 Spc97 / Spc98 family of spindle pole body (SBP) component4.9e-2747.62Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQST------FNACNLLDS
        MEE  +ILKNNR +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDL+ LR++G VLMEH   + R  + + L+ S        + CNLL +
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQST------FNACNLLDS

Query:  NLEKILSIDEIMASICSDRRKKPGKR
        +++  + I+EI+  IC ++ KK  ++
Subjt:  NLEKILSIDEIMASICSDRRKKPGKR

AT1G80245.2 Spc97 / Spc98 family of spindle pole body (SBP) component4.9e-2747.62Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQST------FNACNLLDS
        MEE  +ILKNNR +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDL+ LR++G VLMEH   + R  + + L+ S        + CNLL +
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQST------FNACNLLDS

Query:  NLEKILSIDEIMASICSDRRKKPGKR
        +++  + I+EI+  IC ++ KK  ++
Subjt:  NLEKILSIDEIMASICSDRRKKPGKR

AT1G80245.3 Spc97 / Spc98 family of spindle pole body (SBP) component4.9e-2747.62Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQST------FNACNLLDS
        MEE  +ILKNNR +D++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDL+ LR++G VLMEH   + R  + + L+ S        + CNLL +
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQST------FNACNLLDS

Query:  NLEKILSIDEIMASICSDRRKKPGKR
        +++  + I+EI+  IC ++ KK  ++
Subjt:  NLEKILSIDEIMASICSDRRKKPGKR

AT4G00695.1 FUNCTIONS IN: molecular_function unknown4.5e-2548.03Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENL-AEKFDLRTLRAIGFVLMEHLKGK------LRTSDVSDLSQSTFNACNLLD
        MEE ++ILKNNR +D++W CSLSESELDLLIS+K LV++RAK  G E+L A+KFDL+ LR++G VLME+++ +      L  S V +L  S  ++CNLL 
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENL-AEKFDLRTLRAIGFVLMEHLKGK------LRTSDVSDLSQSTFNACNLLD

Query:  SNLEKILSIDEIMASICSDRRKKPGKR
        ++++  + I+EI+  IC+ + KK  ++
Subjt:  SNLEKILSIDEIMASICSDRRKKPGKR

AT4G00695.2 FUNCTIONS IN: molecular_function unknown4.5e-2548.03Show/hide
Query:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENL-AEKFDLRTLRAIGFVLMEHLKGK------LRTSDVSDLSQSTFNACNLLD
        MEE ++ILKNNR +D++W CSLSESELDLLIS+K LV++RAK  G E+L A+KFDL+ LR++G VLME+++ +      L  S V +L  S  ++CNLL 
Subjt:  MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENL-AEKFDLRTLRAIGFVLMEHLKGK------LRTSDVSDLSQSTFNACNLLD

Query:  SNLEKILSIDEIMASICSDRRKKPGKR
        ++++  + I+EI+  IC+ + KK  ++
Subjt:  SNLEKILSIDEIMASICSDRRKKPGKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGGCGAATGAAATTTTGAAGAATAACAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGT
TCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAAAAATTTGATTTGAGAACGCTACGTGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAAAACTTA
GAACATCAGATGTTTCAGATCTATCTCAATCTACCTTTAATGCGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAAGTATTTGC
TCAGACAGAAGGAAGAAACCAGGAAAAAGGTTGGTACCATTTACAAGTAGTTGTGTTTGTATTGTTCAAGACCACATTTTGGAAAGAATAGTGAAATGTCATGTTAATTA
TTGCTTTGTTATTTTAATATTCCATATTAACAGGGAAAAAAAACTTTCGACGACTACATTAACCTTTTGGTATTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGGCGAATGAAATTTTGAAGAATAACAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGT
TCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAAAAATTTGATTTGAGAACGCTACGTGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAAAACTTA
GAACATCAGATGTTTCAGATCTATCTCAATCTACCTTTAATGCGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCAAGTATTTGC
TCAGACAGAAGGAAGAAACCAGGAAAAAGGTTGGTACCATTTACAAGTAGTTGTGTTTGTATTGTTCAAGACCACATTTTGGAAAGAATAGTGAAATGTCATGTTAATTA
TTGCTTTGTTATTTTAATATTCCATATTAACAGGGAAAAAAAACTTTCGACGACTACATTAACCTTTTGGTATTCGTAA
Protein sequenceShow/hide protein sequence
MEEANEILKNNRIEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLRTLRAIGFVLMEHLKGKLRTSDVSDLSQSTFNACNLLDSNLEKILSIDEIMASIC
SDRRKKPGKRLVPFTSSCVCIVQDHILERIVKCHVNYCFVILIFHINREKKLSTTTLTFWYS