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Cucsat.G18956 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G18956
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionhigh mobility group B protein 7-like
Genome locationctg3453:56875..59110
RNA-Seq ExpressionCucsat.G18956
SyntenyCucsat.G18956
Gene Ontology termsGO:0010197 - polar nucleus fusion (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016615.1 High mobility group B protein 7 [Cucurbita argyrosperma subsp. argyrosperma]5.21e-8992.31Show/hide
Query:  MAGGGSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEK
        MAGGGSSKSRKRVEATPA  A TGPSLVRAKDGSAFARCDECGKSVP ALISMHSCSLDAKIR NLE+QTVEKQTQ+KKPAEKKRSA SEPK KKSRTEK
Subjt:  MAGGGSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEK

Query:  KGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE
        +GKKDKDPNAPKRPPTAFF+FMDDFRKSYKEA+PDSKGVKEVAKEGGEKWKSMTDE
Subjt:  KGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE

XP_004150195.1 high mobility group B protein 7 [Cucumis sativus]9.70e-97100Show/hide
Query:  MAGGGSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEK
        MAGGGSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEK
Subjt:  MAGGGSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEK

Query:  KGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE
        KGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE
Subjt:  KGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE

XP_022938415.1 high mobility group B protein 7-like [Cucurbita moschata]3.80e-8992.31Show/hide
Query:  MAGGGSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEK
        MAGGGSSKSRKRVEATPA  A+TGPSLVRAKDGSAFARCDECGKSVP ALISMHSCSLDAKIR NLE+QTVEKQTQ+KKPAEKKRSA SEPK KKSRTEK
Subjt:  MAGGGSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEK

Query:  KGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE
        +GKKDKDPNAPKRPPTAFF+FMDDFRKSYKEA+PDSKGVKEVAKEGGEKWKSMTDE
Subjt:  KGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE

XP_023550365.1 high mobility group B protein 7-like [Cucurbita pepo subsp. pepo]5.39e-8992.31Show/hide
Query:  MAGGGSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEK
        MAGGGSSKSRKRVEATPA  A TGPSLVRAKDGSAFARCDECGKSVP ALISMHSCSLDAKIR NLE+QTVEKQTQ+KKPAEKKRSA SEPK KKSRTEK
Subjt:  MAGGGSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEK

Query:  KGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE
        +GKKDKDPNAPKRPPTAFF+FMDDFRKSYKEA+PDSKGVKEVAKEGGEKWKSMTDE
Subjt:  KGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE

XP_038875553.1 high mobility group B protein 7 [Benincasa hispida]2.11e-8993.08Show/hide
Query:  DEEMAGGGSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSR
        +EEMAG GSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLE+QTVEKQTQ+KKPAE+KRSA SE   KKS+
Subjt:  DEEMAGGGSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSR

Query:  TEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE
        T KKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE
Subjt:  TEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE

TrEMBL top hitse value%identityAlignment
A0A1S3CP32 high mobility group B protein 72.62e-8495.8Show/hide
Query:  MAGGGSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEK
        MAGGGSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLE+QTVEKQTQSKKPAEKK+SASSEPK KKSRT+K
Subjt:  MAGGGSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEK

Query:  KGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVA
        KGKKDKDPNAPKRPPTAFFIFMDDFRKS+KEANPDSKGVKEV+
Subjt:  KGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVA

A0A5A7VD68 High mobility group B protein 77.28e-8479.89Show/hide
Query:  MAGGGSSKSRKRVEATPADVAATGPSLVRAKDGS----------------------------AFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVE
        MAGGGSSKSRKRVEATPADVAATGPSLVRAKDG                             AF   DECGKSVPVALISMHSCSLDAKIRMNLE+QTVE
Subjt:  MAGGGSSKSRKRVEATPADVAATGPSLVRAKDGS----------------------------AFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVE

Query:  KQTQSKKPAEKKRSASSEPKTKKSRTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE
        KQTQSKKPAEKK+SASSEPK KKSRT+KKGKKDKDPNAPKRPPTAFFIFMDDFRKS+KEANPDSKGVKEVAKEGGEKWKSMTDE
Subjt:  KQTQSKKPAEKKRSASSEPKTKKSRTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE

A0A6J1CKD5 high mobility group B protein 71.30e-8689.38Show/hide
Query:  DEEMAGGGSSKSRKRVEATPADVA-ATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKS
        D +MAGGGSSKSRKRVEATPAD A ATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQ+KK +E+KRSASSEPK KKS
Subjt:  DEEMAGGGSSKSRKRVEATPADVA-ATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKS

Query:  RTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE
        + EK+GKKD+DPNAPKRPPTAFFIFMDDFRKSYKE +PDSKG KEVAKEGGEKWKS+TDE
Subjt:  RTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE

A0A6J1FJR0 high mobility group B protein 7-like1.84e-8992.31Show/hide
Query:  MAGGGSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEK
        MAGGGSSKSRKRVEATPA  A+TGPSLVRAKDGSAFARCDECGKSVP ALISMHSCSLDAKIR NLE+QTVEKQTQ+KKPAEKKRSA SEPK KKSRTEK
Subjt:  MAGGGSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEK

Query:  KGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE
        +GKKDKDPNAPKRPPTAFF+FMDDFRKSYKEA+PDSKGVKEVAKEGGEKWKSMTDE
Subjt:  KGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE

A0A6J1JX92 high mobility group B protein 7-like1.06e-8891.67Show/hide
Query:  MAGGGSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEK
        MAGGGSSKSRKRVEATPA  A TGPSLVRAKDGSAFARCDECGKSVP ALISMHSCSLDAKIR NLE+QTV+KQTQ+KKPAEKKRSA SEPK KKSRTEK
Subjt:  MAGGGSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEK

Query:  KGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE
        +GKKDKDPNAPKRPPTAFF+FMDDFRKSYKEA+PDSKGVKEVAKEGGEKWKSMTDE
Subjt:  KGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE

SwissProt top hitse value%identityAlignment
O49597 High mobility group B protein 52.8e-1358.06Show/hide
Query:  KSRTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE
        K R  K GKK KDPN PK+PP+ FF+F+DDFRK +  ANPD+K V  V +  G+KWK+MT+E
Subjt:  KSRTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE

P40619 HMG1/2-like protein5.8e-1148.78Show/hide
Query:  KQTQSKKPAEKKRSASSEPKTKKSRTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMT
        K  +SK  ++ K +     K + + T+K  K  KDPN PKRPP+AFF+FM+DFRK+YKE +P++K V  V K GG+KWK +T
Subjt:  KQTQSKKPAEKKRSASSEPKTKKSRTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMT

P40620 HMG1/2-like protein2.0e-1145.56Show/hide
Query:  ESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE
        +S+   K+ ++K    KK +A+    TK  +   KGK+ KDPN PKRPP+AFF+FM DFR+ YK+ +P++K V  V K  GE+WKS+++E
Subjt:  ESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE

Q42344 High mobility group B protein 41.8e-1253.16Show/hide
Query:  KPAEKKRSASSEPKTKKSRTEKKGKK-DKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE
        K  E K  A+S  +  K+R  K GKK  KDPN PKRPP+AFF+F++DFRK +  ANP++K V  V K  G +WK+MTDE
Subjt:  KPAEKKRSASSEPKTKKSRTEKKGKK-DKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE

Q8LDF9 High mobility group B protein 74.6e-3258.28Show/hide
Query:  KSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQS-KKPAEKKRSASSEPKTKK-SRTEKKGKKD
        K RKRVEA  +  + T  +L RAKDGSAFA C+ C KSV VALISMH+CSLDAKIR+NLE+Q VE Q ++ KKPAEKK++ S  PK K+  +T  + K  
Subjt:  KSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQS-KKPAEKKRSASSEPKTKK-SRTEKKGKKD

Query:  KDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE
           N PKRP TAFFIFM DFRK++K  +  S   K+ AK GGEKWKS+T+E
Subjt:  KDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE

Arabidopsis top hitse value%identityAlignment
AT2G17560.1 high mobility group B41.3e-1353.16Show/hide
Query:  KPAEKKRSASSEPKTKKSRTEKKGKK-DKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE
        K  E K  A+S  +  K+R  K GKK  KDPN PKRPP+AFF+F++DFRK +  ANP++K V  V K  G +WK+MTDE
Subjt:  KPAEKKRSASSEPKTKKSRTEKKGKK-DKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE

AT2G17560.2 high mobility group B41.3e-1353.16Show/hide
Query:  KPAEKKRSASSEPKTKKSRTEKKGKK-DKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE
        K  E K  A+S  +  K+R  K GKK  KDPN PKRPP+AFF+F++DFRK +  ANP++K V  V K  G +WK+MTDE
Subjt:  KPAEKKRSASSEPKTKKSRTEKKGKK-DKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE

AT4G35570.1 high mobility group B52.0e-1458.06Show/hide
Query:  KSRTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE
        K R  K GKK KDPN PK+PP+ FF+F+DDFRK +  ANPD+K V  V +  G+KWK+MT+E
Subjt:  KSRTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE

AT5G23420.1 high-mobility group box 63.3e-3358.28Show/hide
Query:  KSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQS-KKPAEKKRSASSEPKTKK-SRTEKKGKKD
        K RKRVEA  +  + T  +L RAKDGSAFA C+ C KSV VALISMH+CSLDAKIR+NLE+Q VE Q ++ KKPAEKK++ S  PK K+  +T  + K  
Subjt:  KSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQS-KKPAEKKRSASSEPKTKK-SRTEKKGKKD

Query:  KDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE
           N PKRP TAFFIFM DFRK++K  +  S   K+ AK GGEKWKS+T+E
Subjt:  KDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDE

AT5G23420.2 high-mobility group box 64.3e-1763.86Show/hide
Query:  KSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQS-KKPAEKKRSASS
        K RKRVEA  +  + T  +L RAKDGSAFA C+ C KSV VALISMH+CSLDAKIR+NLE+Q VE Q ++ KKPAEKK   S+
Subjt:  KSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQS-KKPAEKKRSASS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGGCGCCAAAATTTAGAAGAAAAAACTTTCCCTCTTTCTTACTTGGTTTGCTTTAATAACAATTGCCGCTTCACTTTTCATCACCGAAGAAGGAAATCCCATTTCCCCTC
AATTCTTCTGCATTTTCAAATTTACCGGCTCACCCGAGGAGACGAAGAAATGGCCGGCGGAGGATCCTCCAAGTCCCGGAAGAGAGTGGAGGCTACTCCTGCTGACGTCG
CCGCTACTGGTCCTTCGCTTGTGAGGGCCAAAGACGGCAGTGCTTTTGCTAGATGTGACGAGTGCGGTAAAAGTGTTCCGGTGGCCTTAATCAGCATGCACAGTTGCAGC
CTCGACGCCAAAATTAGAATGAATTTAGAGTCTCAGACTGTTGAAAAGCAAACACAATCCAAAAAGCCAGCTGAAAAGAAAAGATCAGCATCATCTGAACCTAAGACTAA
GAAATCCCGAACTGAGAAGAAAGGGAAGAAGGACAAAGATCCAAATGCCCCCAAACGCCCTCCTACAGCTTTCTTTATCTTCATGGATGACTTCAGAAAGTCATATAAAG
AAGCCAATCCTGATTCCAAGGGCGTTAAGGAGGTTGCAAAGGAGGGTGGTGAGAAATGGAAGTCAATGACTGATGAAGTGAGTTAA
mRNA sequenceShow/hide mRNA sequence
GGGCGCCAAAATTTAGAAGAAAAAACTTTCCCTCTTTCTTACTTGGTTTGCTTTAATAACAATTGCCGCTTCACTTTTCATCACCGAAGAAGGAAATCCCATTTCCCCTC
AATTCTTCTGCATTTTCAAATTTACCGGCTCACCCGAGGAGACGAAGAAATGGCCGGCGGAGGATCCTCCAAGTCCCGGAAGAGAGTGGAGGCTACTCCTGCTGACGTCG
CCGCTACTGGTCCTTCGCTTGTGAGGGCCAAAGACGGCAGTGCTTTTGCTAGATGTGACGAGTGCGGTAAAAGTGTTCCGGTGGCCTTAATCAGCATGCACAGTTGCAGC
CTCGACGCCAAAATTAGAATGAATTTAGAGTCTCAGACTGTTGAAAAGCAAACACAATCCAAAAAGCCAGCTGAAAAGAAAAGATCAGCATCATCTGAACCTAAGACTAA
GAAATCCCGAACTGAGAAGAAAGGGAAGAAGGACAAAGATCCAAATGCCCCCAAACGCCCTCCTACAGCTTTCTTTATCTTCATGGATGACTTCAGAAAGTCATATAAAG
AAGCCAATCCTGATTCCAAGGGCGTTAAGGAGGTTGCAAAGGAGGGTGGTGAGAAATGGAAGTCAATGACTGATGAAGTGAGTTAA
Protein sequenceShow/hide protein sequence
GRQNLEEKTFPLSYLVCFNNNCRFTFHHRRRKSHFPSILLHFQIYRLTRGDEEMAGGGSSKSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCS
LDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEVS