; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G19034 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G19034
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionAnaphase-promoting complex subunit 13
Genome locationctg35:302885..305684
RNA-Seq ExpressionCucsat.G19034
SyntenyCucsat.G19034
Gene Ontology termsGO:0007049 - cell cycle (biological process)
GO:0051301 - cell division (biological process)
GO:0070979 - protein K11-linked ubiquitination (biological process)
GO:0005680 - anaphase-promoting complex (cellular component)
GO:0004386 - helicase activity (molecular function)
InterPro domainsIPR008401 - Apc13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042977.1 anaphase-promoting complex subunit 13 isoform X2 [Cucumis melo var. makuwa]3.17e-8487.25Show/hide
Query:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID
        +++  +PVLN  PQL  HPSLSSL ARFPR HSSSSV HYSLTTH HSRSLRPLVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILID
Subjt:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID

Query:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL
        ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLAL
Subjt:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL

KGN63398.1 hypothetical protein Csa_022587 [Cucumis sativus]5.64e-159100Show/hide
Query:  MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYFRNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRC
        MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYFRNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRC
Subjt:  MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYFRNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRC

Query:  HSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTED
        HSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTED
Subjt:  HSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTED

Query:  SNQETQPVDTDTWHDLALGNQ
        SNQETQPVDTDTWHDLALGNQ
Subjt:  SNQETQPVDTDTWHDLALGNQ

TYK11109.1 anaphase-promoting complex subunit 13 isoform X2 [Cucumis melo var. makuwa]7.41e-8386.58Show/hide
Query:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID
        +++  +PVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILID
Subjt:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID

Query:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL
        ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLAL
Subjt:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL

XP_004148091.1 anaphase-promoting complex subunit 13 [Cucumis sativus]3.60e-36100Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
        MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
Subjt:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ

XP_008459198.1 PREDICTED: uncharacterized protein LOC103498390 [Cucumis melo]2.82e-8586.84Show/hide
Query:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID
        +++  +PVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILID
Subjt:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID

Query:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
        ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLALGNQ
Subjt:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ

TrEMBL top hitse value%identityAlignment
A0A0A0LNL0 Anaphase-promoting complex subunit 132.73e-159100Show/hide
Query:  MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYFRNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRC
        MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYFRNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRC
Subjt:  MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYFRNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRC

Query:  HSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTED
        HSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTED
Subjt:  HSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTED

Query:  SNQETQPVDTDTWHDLALGNQ
        SNQETQPVDTDTWHDLALGNQ
Subjt:  SNQETQPVDTDTWHDLALGNQ

A0A1S3CA59 Anaphase-promoting complex subunit 131.37e-8586.84Show/hide
Query:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID
        +++  +PVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILID
Subjt:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID

Query:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
        ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLALGNQ
Subjt:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ

A0A5A7TMF9 Anaphase-promoting complex subunit 131.53e-8487.25Show/hide
Query:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID
        +++  +PVLN  PQL  HPSLSSL ARFPR HSSSSV HYSLTTH HSRSLRPLVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILID
Subjt:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID

Query:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL
        ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLAL
Subjt:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL

A0A5D3CLL3 Anaphase-promoting complex subunit 133.59e-8386.58Show/hide
Query:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID
        +++  +PVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILID
Subjt:  RQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILID

Query:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL
        ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLAL
Subjt:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL

A0A6J1JH61 Anaphase-promoting complex subunit 132.27e-3495.24Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
        MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVR DDTEDSNQE QPVD DTWHDLALGNQ
Subjt:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ

SwissProt top hitse value%identityAlignment
Q8L981 Anaphase-promoting complex subunit 139.4e-2073.02Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
        MAE+SLG+LIDI+DEEWMRDTLP DDL LPPVL V+ DDTE++NQETQ  D +TW DLAL  Q
Subjt:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ

Arabidopsis top hitse value%identityAlignment
AT1G73177.1 bonsai6.7e-2173.02Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
        MAE+SLG+LIDI+DEEWMRDTLP DDL LPPVL V+ DDTE++NQETQ  D +TW DLAL  Q
Subjt:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGAATAACAATTAACAACGATACTTGTATAGTTTGTAGAAGAAATTACATAACCTTTTCTTTCAGTTCCTTTGCCACTCCATATTTTCGGTCTCCTCTGCTTTA
CTCACTCACTCAAACTCTCAGCATTTCAAACAAGAACTTGGGCTTTAAAAGCCCAAAGTTGGCCTACTTTAGAAATGGATGGTACTGCGTGTGCCTAAGGCAGAAGACAC
CGTCCCCCGTCCTCAACTTCCCGCCTCAATTGAACCTTCATCCGTCTTTGTCGTCCCTTCACGCAAGATTTCCACGCTGCCATTCCTCTTCATCAGTCACCCACTACTCG
CTCACGACTCATCGACATTCCAGATCGCTCAGGCCACTGGTTGGTGATTTGTCTCAGATCCGGCTGCATTCGGTCTCCGCCCTTCGATCCTTGACTCCAACGTTGATATT
GGGTTTTAGAATCTACCTTAATAAGAAAACACCAATGGCAGAACTTAGTCTGGGTATATTGATAGACATTCTAGATGAGGAATGGATGAGAGACACACTCCCTCATGATG
ATCTTTTACTCCCTCCCGTGCTGGTTGTTCGGGCTGATGACACCGAGGACTCAAATCAGGAGACTCAGCCAGTTGATACTGATACTTGGCATGATCTTGCCTTAGGTAAC
CAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACGAGAATAACAATTAACAACGATACTTGTATAGTTTGTAGAAGAAATTACATAACCTTTTCTTTCAGTTCCTTTGCCACTCCATATTTTCGGTCTCCTCTGCTTTA
CTCACTCACTCAAACTCTCAGCATTTCAAACAAGAACTTGGGCTTTAAAAGCCCAAAGTTGGCCTACTTTAGAAATGGATGGTACTGCGTGTGCCTAAGGCAGAAGACAC
CGTCCCCCGTCCTCAACTTCCCGCCTCAATTGAACCTTCATCCGTCTTTGTCGTCCCTTCACGCAAGATTTCCACGCTGCCATTCCTCTTCATCAGTCACCCACTACTCG
CTCACGACTCATCGACATTCCAGATCGCTCAGGCCACTGGTTGGTGATTTGTCTCAGATCCGGCTGCATTCGGTCTCCGCCCTTCGATCCTTGACTCCAACGTTGATATT
GGGTTTTAGAATCTACCTTAATAAGAAAACACCAATGGCAGAACTTAGTCTGGGTATATTGATAGACATTCTAGATGAGGAATGGATGAGAGACACACTCCCTCATGATG
ATCTTTTACTCCCTCCCGTGCTGGTTGTTCGGGCTGATGACACCGAGGACTCAAATCAGGAGACTCAGCCAGTTGATACTGATACTTGGCATGATCTTGCCTTAGGTAAC
CAATGA
Protein sequenceShow/hide protein sequence
MTRITINNDTCIVCRRNYITFSFSSFATPYFRSPLLYSLTQTLSISNKNLGFKSPKLAYFRNGWYCVCLRQKTPSPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYS
LTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGN
Q