| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6605170.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 0.0 | 90.96 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS++KSVVIAK SA+FSP YP SNRH Q CIKAVKEHV+TPSSP AEPW HNTT WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWED
Query: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTD P+ KT KKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL+P+ISPELLQNRL+GYVKG
Subjt: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGL LEE KTRLK+RL CEPSE+QLAISL+ISRAELRSR+ME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSKKKV+NATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTW LK+EVN+LINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
|
|
| XP_004151855.1 RNA polymerase sigma factor sigA [Cucumis sativus] | 0.0 | 100 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWHNTTSWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWHNTTSWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWHNTTSWEDE
Query: ETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Subjt: ETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: LSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
LSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: LSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Subjt: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
|
|
| XP_016902935.1 PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo] | 0.0 | 95.68 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVS +KSVVIAKSSANFSP YP SNRHSQQCIKAVKEHVETPSSP AEPW NTT WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWED
Query: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTD P+EKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGL LEE KTRLK+RLGCEPSEDQLAISLKISRAELRSRMME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKV+NATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
|
|
| XP_023533104.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 0.0 | 90.96 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS++KSVVIAK SA+FSP YP SNRH Q CIKAVKEHV+TPSSP AEPW HNTT WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWED
Query: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTD P+ KT KKVPVTCSGVSARQRRMSSKRKIQSKHVF+AQPKISKQL+P+ISPELLQNRL+GYVKG
Subjt: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGL LEE KTRLK+RL CEPSE+QLAISL+ISRAELRSR+ME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSKKKV+NATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILK+EVN+LINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
|
|
| XP_038902049.1 RNA polymerase sigma factor sigA [Benincasa hispida] | 0.0 | 94.71 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYAN-DYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILY N D+RLGQTQVS +KSVVIAKSSANFSP YPSSNRHSQ CIKAVKEHV+TPSSP AEPW HNTT WE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYAN-DYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWE
Query: DEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
DEE +LK TVEALLLLQKSMLEKQW+LSFEQTVSTD P+ KT KKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
Subjt: DEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
Query: GLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
GLLSEELLSHAEVVRLSKKIKVGL LEERKTRLK+RLGCEPSEDQLAISLKISRAELRSR+ME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKV+NATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Query: RKMEAMLLKH
RKMEAMLLKH
Subjt: RKMEAMLLKH
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LQR2 RNA_pol_sigma70 domain-containing protein | 0.0 | 100 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWHNTTSWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWHNTTSWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPWHNTTSWEDE
Query: ETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Subjt: ETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: LSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
LSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: LSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Subjt: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
|
|
| A0A1S4E4N5 RNA polymerase sigma factor sigA | 0.0 | 95.68 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVS +KSVVIAKSSANFSP YP SNRHSQQCIKAVKEHVETPSSP AEPW NTT WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWED
Query: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTD P+EKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGL LEE KTRLK+RLGCEPSEDQLAISLKISRAELRSRMME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKV+NATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
|
|
| A0A5D3BME8 RNA polymerase sigma factor sigA | 0.0 | 95.68 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVS +KSVVIAKSSANFSP YP SNRHSQQCIKAVKEHVETPSSP AEPW NTT WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWED
Query: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTD P+EKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGL LEE KTRLK+RLGCEPSEDQLAISLKISRAELRSRMME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKV+NATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
|
|
| A0A6J1D604 RNA polymerase sigma factor sigA | 0.0 | 90.57 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWED
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LYAND+RLGQ+QVS +KSVVIAKSSANFSP +PSSNRH+Q CIKAVKEHV+TPSSP EPW N+T WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWED
Query: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EE +LK TVEALLLLQKSMLEKQW+LSFEQTV TD + +T KKVPVTCSGVSARQRRMSSKRKIQSK+ FM QPKISKQLR TISPELLQ RLKGYVKG
Subjt: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGL LEERKTRLK+RLGCEPSEDQLAISLKISR ELRSR++E SLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDRE
IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKV+NATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LEN+PWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
|
|
| A0A6J1KWY7 RNA polymerase sigma factor sigA-like | 0.0 | 90.57 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS++K VVIAK SA+FSP Y SNRH Q CIKAVKEHV+TPSSP AEPW HNTT WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWED
Query: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTD P+ KT KKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL+P ISPELLQNRL+GYVKG
Subjt: EETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGL LEE KTRLK+RL C+PSE+QLAISL+ISRAELRSR+ME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSKKKV+NATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILK+EVN+LINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| O24629 RNA polymerase sigma factor sigA | 2.5e-185 | 68.28 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWE--
MATAA+IGL KRLL+SS Y+SD TEK L ND+ Q ++S+KS + AK ++N+SP +PSSNRH+Q KA+KE V+ S+ +PW N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWE--
Query: ----DEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
D++ + ++VEA+LLLQKSMLEK W+LSFE+ VS++ P + T+ KK+PV TCSG+SARQRR+ +K+K HV +S
Subjt: ----DEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
Query: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEM
+++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK RLGCEPS++QLA+SLKISRAEL++ +ME LAREKLAMSNVRLVMSIAQRYDN+GAEM
Subjt: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEM
Query: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAIS
+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPS+DRIAESLNMS+KKV+NATEA+S
Subjt: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
KVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV++LI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEK
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
Query: LKKAAKTRKMEAMLLKH
LK AA+ RKMEAM+LK+
Subjt: LKKAAKTRKMEAMLLKH
|
|
| P26683 RNA polymerase sigma factor SigA | 7.1e-39 | 33.03 | Show/hide |
Query: KISKQLRPTISPE--LLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMS
K +K R T S + ++ ++ Y++ + LL E + L++KI L LE + RL ++L +P + + A ++++ R R+ A++K+ S
Subjt: KISKQLRPTISPE--LLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMS
Query: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSLDR
N+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSLDR
Query: IAESLNMSKKKVQNATEAISKVFSLD----REAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDN-E
IA + M+ +K++ ++ SL+ +E L GET ++ N +L+ ++ ++++ +L RER+++RL +GLD+
Subjt: IAESLNMSKKKVQNATEAISKVFSLD----REAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDN-E
Query: CLTWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: CLTWEEISKRIGLSRERVRQVGLVALEKLK
|
|
| P38023 RNA polymerase sigma factor SigA1 | 1.2e-38 | 33.23 | Show/hide |
Query: AQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAM
A K ++R T + ++ ++ Y++ + LL E + L+++I L LE + L ++L PS+ + A ++ E R R+ A++K+
Subjt: AQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAM
Query: SNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSLD
SN+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: SNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSLD
Query: RIAESLNMSKKKVQNATEAISKVFSLD----REAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDN-
IA + M+ +K++ ++ SL+ +E L GET +A N +L+ ++ +++ TL RER+++RL +GLD+
Subjt: RIAESLNMSKKKVQNATEAISKVFSLD----REAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDN-
Query: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
|
|
| Q03065 RNA polymerase sigma-B factor | 2.7e-38 | 32.76 | Show/hide |
Query: LLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLR
LLSH + + +++++ + + K L ++L EP+ + A +++ L ++ + +A++K+ +N+RLV+SIA++Y E DL+Q G +GL R
Subjt: LLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLR
Query: GIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEK-GITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREAFPS
G+EKFD + G+K STY YWWIRQG++RA+ + SRT+RLP H+ ++L I+ + +L +K G + IA++LN+ +++ + + + SLD
Subjt: GIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEK-GITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREAFPS
Query: LNGLPGETH-HSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLKK
G +T + D+ + +P + +L +++ L+ L +++E++ L GL C LT +IS+R+G+SRERVRQV AL L++
Subjt: LNGLPGETH-HSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLKK
|
|
| Q0J7T6 RNA polymerase sigma factor sigA | 1.5e-129 | 51.33 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSD-FTEKILY--------ANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEH------VETPSS
M AT A+IGL A RLL++S +D +K+ G + + K +A + R S Q ++A++ H + P
Subjt: MMATAAIIGLGAAKRLLNSSSYYSD-FTEKILY--------ANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEH------VETPSS
Query: PIAEPWHNTTSWEDEETELKYTVEALLLLQKSMLEKQWSLSFE-----QTVSTDTPKEKTLK-KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQ
P P + S +L+ ++EA++LLQ+SMLEKQW L F+ + + T K V V S VSARQRRMS +R+ ++K +
Subjt: PIAEPWHNTTSWEDEETELKYTVEALLLLQKSMLEKQWSLSFE-----QTVSTDTPKEKTLK-KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQ
Query: LRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMS
+SPEL+Q+R + Y++G +S+ELL+H +VV LS KIK G+ L++++++LK++LG EPS QLA SLKIS ELRSRM ES LARE L MSN+RLV+S
Subjt: LRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMS
Query: IAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMS
IAQ+YDN+G E+ADL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVSRAL ENS+T RLPT+LHERL IR AK +L+++GI P+++ IA SLN+S
Subjt: IAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMS
Query: KKKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRE
+KKV NATEA++KV SLD++AFPSLNGLPGET HSYI D + N+PWHG + W LK EVN+L+N TL +RER+IIRLYHG+ +C TWE+IS++ GLSRE
Subjt: KKKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRE
Query: RVRQVGLVALEKLKKAAKTRKMEAML
RVRQVGL+A+EKLK AA+ + +EA+L
Subjt: RVRQVGLVALEKLKKAAKTRKMEAML
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G08540.1 RNApolymerase sigma subunit 2 | 9.6e-39 | 32.41 | Show/hide |
Query: SSPIAEPWHNTTSWEDEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTP-KEKTLKKVPVTCSGV-SARQRRMSSKRKIQSKHVFMAQPKISKQLR
S I N S D E+E + VE +LE+Q S+S + T K + K + T SG+ S + K+++ ++ V P + LR
Subjt: SSPIAEPWHNTTSWEDEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTP-KEKTLKKVPVTCSGV-SARQRRMSSKRKIQSKHVFMAQPKISKQLR
Query: PTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIA
T S S +LL+ E LS I+ L LE +T L +R G +P+ Q A + + + LR R+ +L ++K+ SN+RLV+SIA
Subjt: PTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIA
Query: QRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSLDRIAESLNMSK
+ Y G + DLVQ G GL+RG EKFD++KGFK STY +WWI+Q V ++L + SR +RLP H+ E ++ A+ +L E G P + IAE+ +S
Subjt: QRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSLDRIAESLNMSK
Query: KKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KVEVNQLINMTLGDREREIIRLYHGL-DNECLTWEEISKRI
K++ + SLD++ + N P E IAD P T IL + +++++++ +LG RE+++IR G+ D T +EI + +
Subjt: KKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KVEVNQLINMTLGDREREIIRLYHGL-DNECLTWEEISKRI
Query: GLSRERVRQVGLVALEKLKKAAKTRKMEAMLL
G+SRERVRQ+ A KLK + ++ L+
Subjt: GLSRERVRQVGLVALEKLKKAAKTRKMEAMLL
|
|
| AT1G64860.1 sigma factor A | 1.8e-186 | 68.28 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWE--
MATAA+IGL KRLL+SS Y+SD TEK L ND+ Q ++S+KS + AK ++N+SP +PSSNRH+Q KA+KE V+ S+ +PW N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWE--
Query: ----DEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
D++ + ++VEA+LLLQKSMLEK W+LSFE+ VS++ P + T+ KK+PV TCSG+SARQRR+ +K+K HV +S
Subjt: ----DEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
Query: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEM
+++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK RLGCEPS++QLA+SLKISRAEL++ +ME LAREKLAMSNVRLVMSIAQRYDN+GAEM
Subjt: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEM
Query: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAIS
+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPS+DRIAESLNMS+KKV+NATEA+S
Subjt: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
KVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV++LI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEK
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
Query: LKKAAKTRKMEAMLLKH
LK AA+ RKMEAM+LK+
Subjt: LKKAAKTRKMEAMLLKH
|
|
| AT1G64860.2 sigma factor A | 7.3e-172 | 67.08 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWE--
MATAA+IGL KRLL+SS Y+SD TEK L ND+ Q ++S+KS + AK ++N+SP +PSSNRH+Q KA+KE V+ S+ +PW N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIAEPW-HNTTSWE--
Query: ----DEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
D++ + ++VEA+LLLQKSMLEK W+LSFE+ VS++ P + T+ KK+PV TCSG+SARQRR+ +K+K HV +S
Subjt: ----DEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
Query: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEM
+++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK RLGCEPS++QLA+SLKISRAEL++ +ME LAREKLAMSNVRLVMSIAQRYDN+GAEM
Subjt: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEM
Query: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAIS
+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPS+DRIAESLNMS+KKV+NATEA+S
Subjt: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVQNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
KVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV++LI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRI
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
|
|
| AT2G36990.1 RNApolymerase sigma-subunit F | 2.6e-36 | 32.59 | Show/hide |
Query: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
L+ ++ G +++LL+ E L I+ L LE+ KT+L+ + GCEP+ + A ++ IS L+S + +REKL +N+RLV+ IA++Y N G
Subjt: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVKLQEKGITPSLDRIAESLNMSKKKVQNATEAIS
DL+Q G +GL++ +EKF G + +TY YWWIRQ + +++ +NSRT+RLP +++ LG + A K +QE PS + +A + +S +K+
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVKLQEKGITPSLDRIAESLNMSKKKVQNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
S+ + + + T D+ +E P +++ V L+N+ L +ER II+L G+D + + EI + GLS+ERVRQ+ AL
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
Query: KLKKAAKTRKMEA
+LK+ + + A
Subjt: KLKKAAKTRKMEA
|
|
| AT5G13730.1 sigma factor 4 | 1.9e-34 | 33.63 | Show/hide |
Query: SSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSR
S KR+ + + + ++ + E + V G LS E V+L +K G LE LG E+++ L S + R
Subjt: SSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELRSR
Query: MMESSL-----AREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI
L AREK+ RLV+SIA Y G + DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q + RA+ SR ++LP + E +
Subjt: MMESSL-----AREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI
Query: RNAKVKLQEK-GITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDRERE
A L K PS + IAE LN++ V+ A E SLDR A + G I E P +K E+ QL+ +L RE
Subjt: RNAKVKLQEK-GITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKVEVNQLINMTLGDRERE
Query: IIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
++ LY GL+ E +++EEI K + LSRERVRQ+ +AL+KL+
Subjt: IIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
|
|
