; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G19098 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G19098
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionbinding partner of ACD11 1-like
Genome locationctg35:308506..310891
RNA-Seq ExpressionCucsat.G19098
SyntenyCucsat.G19098
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042981.1 binding partner of ACD11 1-like isoform X1 [Cucumis melo var. makuwa]9.00e-15896.84Show/hide
Query:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD
        MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKD KGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPA+D
Subjt:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD

Query:  NTTSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA
        NTTSTT  TAGSA+QK EDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA
Subjt:  NTTSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA

Query:  GSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
        GSA+M NRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
Subjt:  GSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS

XP_004148092.1 binding partner of ACD11 1 [Cucumis sativus]2.61e-164100Show/hide
Query:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD
        MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD
Subjt:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD

Query:  NTTSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA
        NTTSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA
Subjt:  NTTSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA

Query:  GSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
        GSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
Subjt:  GSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS

XP_016902374.1 PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo]9.90e-14196.52Show/hide
Query:  FSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTTSTTNSTAGSAMQKAEDVVSS
        FSFSGEIEFVEMRNDNERSQLAFVTFKD KGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPA+DNTTSTT  TAGSA+QK EDVVSS
Subjt:  FSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTTSTTNSTAGSAMQKAEDVVSS

Query:  MLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQR
        MLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSA+M NRYVLTGASWVSQTFQR
Subjt:  MLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQR

Query:  VAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
        VAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
Subjt:  VAKAAVDVSQKTKEKVLAEEDQGKHVGNSS

XP_038900617.1 binding partner of ACD11 1-like isoform X1 [Benincasa hispida]3.61e-15094.47Show/hide
Query:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD
        MA RTVRVTNVSLS TEKDLRDFFSFSGEIEFVEMR D ERSQLAFVTFKD KGAETSILLSGATIVDQPVSI+SAPDYNLPAV+ASAPVA+PVSTPA D
Subjt:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD

Query:  NTTSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA
        NT S T STAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA
Subjt:  NTTSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA

Query:  GSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
        GSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL E DQGKHVGNSS
Subjt:  GSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS

XP_038900618.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]3.91e-14994.8Show/hide
Query:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTT
        RTVRVTNVSLS TEKDLRDFFSFSGEIEFVEMR D ERSQLAFVTFKD KGAETSILLSGATIVDQPVSI+SAPDYNLPAV+ASAPVA+PVSTPA DNT 
Subjt:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTT

Query:  STTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSA
        S T STAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSA
Subjt:  STTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSA

Query:  IMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
        IMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL E DQGKHVGNSS
Subjt:  IMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS

TrEMBL top hitse value%identityAlignment
A0A0A0LRG1 RRM domain-containing protein1.26e-164100Show/hide
Query:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD
        MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD
Subjt:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD

Query:  NTTSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA
        NTTSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA
Subjt:  NTTSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA

Query:  GSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
        GSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
Subjt:  GSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS

A0A1S3CAU8 binding partner of ACD11 1-like isoform X28.79e-13496.35Show/hide
Query:  MRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTTSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKD
        MRNDNERSQLAFVTFKD KGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPA+DNTTSTT  TAGSA+QK EDVVSSMLAKGFTLGKD
Subjt:  MRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTTSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKD

Query:  ALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQK
        ALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSA+M NRYVLTGASWVSQTFQRVAKAAVDVSQK
Subjt:  ALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQK

Query:  TKEKVLAEEDQGKHVGNSS
        TKEKVLAEEDQGKHVGNSS
Subjt:  TKEKVLAEEDQGKHVGNSS

A0A1S4E2B3 binding partner of ACD11 1-like isoform X14.79e-14196.52Show/hide
Query:  FSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTTSTTNSTAGSAMQKAEDVVSS
        FSFSGEIEFVEMRNDNERSQLAFVTFKD KGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPA+DNTTSTT  TAGSA+QK EDVVSS
Subjt:  FSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTTSTTNSTAGSAMQKAEDVVSS

Query:  MLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQR
        MLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSA+M NRYVLTGASWVSQTFQR
Subjt:  MLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQR

Query:  VAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
        VAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
Subjt:  VAKAAVDVSQKTKEKVLAEEDQGKHVGNSS

A0A5A7TN24 Binding partner of ACD11 1-like isoform X14.36e-15896.84Show/hide
Query:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD
        MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKD KGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPA+D
Subjt:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD

Query:  NTTSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA
        NTTSTT  TAGSA+QK EDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA
Subjt:  NTTSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNA

Query:  GSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
        GSA+M NRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
Subjt:  GSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS

A0A6J1JGG3 binding partner of ACD11 1-like isoform X24.39e-13284.65Show/hide
Query:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD
        MA RTVRVTNVSL ATEK+LR+FFSFSGEIEFVEMR DNE+ Q+AFVTFKD KGAETSILLSGATIVDQP+SI SAPDYNLPAV AS P A   S PA +
Subjt:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD

Query:  NT------TSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTK
        NT      T+ T  T GSAMQKAEDVVSSMLAKGF LGKDALN+AKSFDERHQLT TASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTK
Subjt:  NT------TSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTK

Query:  AAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKH
        AAV+NAGSAIMTNRYV TGASWVSQTFQRVAKAAVDVSQKTKEK+LAE+ QGKH
Subjt:  AAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKH

SwissProt top hitse value%identityAlignment
P87216 Protein vip13.4e-0526.94Show/hide
Query:  VRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTTST
        V VTN+S   TEK + DFFSF G++  +      E +Q A + F+     +T++LL  A +    + I+S         D  A             +T+ 
Subjt:  VRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTTST

Query:  TNSTAGSAMQKAED-----VVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTV-VNEKVREMDEKFQVSEK
             G    + ED     ++S +L++G+ L    L K+   D+ + ++S     + S      LS   SV     V EK  E+D KF +S+K
Subjt:  TNSTAGSAMQKAED-----VVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTV-VNEKVREMDEKFQVSEK

Q9LFD5 Binding partner of ACD11 11.6e-6056.28Show/hide
Query:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTT
        R+V+V N+S  ATE D+++FFSFSGE+E +++++ NE S  A+VTFK+++GAET++LLSGA+I DQ V I  AP+Y+ PA    AP A            
Subjt:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTT

Query:  STTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------A
         T +S A S +QKAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+        
Subjt:  STTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------A

Query:  VSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEE
        VS+AGSA+M NRYVLTG SW +  F RVA+AA +V QKTKEKV AE+
Subjt:  VSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEE

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.9e-7059.3Show/hide
Query:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD
        M   TV+V+NVSL AT++DL++FFSFSG+I ++E +++ ER++LA+VTFKD +GAET++LLSGATIVD  V +S APDY L           P +  +L+
Subjt:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD

Query:  NTTSTTNSTAG-SAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAA---
           S  +  AG S ++KAEDVVSSMLAKGF LGKDA+ KAKS DE+HQLTSTAS+KVAS D+KIG ++KI+ GT VV EKVRE+D+K+QVSEKTK+A   
Subjt:  NTTSTTNSTAG-SAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAA---

Query:  ----VSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEEDQGKHV
            VSNAGSAIM NRYVLTGA+WV+  F +VAKAA +V QK KEKV +AEE+  + V
Subjt:  ----VSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEEDQGKHV

AT5G16840.1 binding partner of acd11 11.2e-6156.28Show/hide
Query:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTT
        R+V+V N+S  ATE D+++FFSFSGE+E +++++ NE S  A+VTFK+++GAET++LLSGA+I DQ V I  AP+Y+ PA    AP A            
Subjt:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTT

Query:  STTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------A
         T +S A S +QKAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+        
Subjt:  STTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------A

Query:  VSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEE
        VS+AGSA+M NRYVLTG SW +  F RVA+AA +V QKTKEKV AE+
Subjt:  VSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEE

AT5G16840.2 binding partner of acd11 16.2e-6356.28Show/hide
Query:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTT
        R+V+V N+S  ATE D+++FFSFSGE+E +++++ NE S  A+VTFK+++GAET++LLSGA+I DQ V I  AP+Y+ PA    AP A            
Subjt:  RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTT

Query:  STTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------A
         T +S A S +QKAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+        
Subjt:  STTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-------A

Query:  VSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEE
        VS+AGSA+M NRYVLTG SW +  F RVA+AA +V QKTKEKV AE+
Subjt:  VSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEE

AT5G16840.3 binding partner of acd11 11.4e-6256.4Show/hide
Query:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD
        MA R+V+V N+S  ATE D+++FFSFSGE+E +++++ NE S  A+VTFK+++GAET++LLSGA+I DQ V I  AP+Y+ PA    AP A         
Subjt:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD

Query:  NTTSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-----
            T +S A S +QKAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D+ FQV+E+TK+     
Subjt:  NTTSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKA-----

Query:  --AVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEE
           VS+AGSA+M NRYVLTG SW +  F RVA+AA +V QKTKEKV AE+
Subjt:  --AVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.9e-6857.71Show/hide
Query:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD
        M+  TV+V+NVSL ATE+DL++FFSFSG+I ++E +++N+ S+LA+VTFKD +GAET++LL+G+TIVD  V+++ +PDY LP  DA A     + +    
Subjt:  MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALD

Query:  NTTSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAA----
        N +S+      S  +KAEDVVS M++KGF LGKDA+ KAKS DE+HQLTSTAS++V S D++IG +EKI+ GTTVV+EKV+E+D+KFQV+EKTK+A    
Subjt:  NTTSTTNSTAGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAA----

Query:  ---VSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEEDQ
           VSNAGSAIM NRYVLTGA+WV+  F RV+KAA +V QK KEKV LAEE++
Subjt:  ---VSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEEDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGAGGACGGTGAGAGTTACCAATGTCTCCTTAAGCGCGACAGAGAAAGATTTGAGAGACTTCTTTTCCTTTTCCGGTGAAATTGAATTTGTCGAAATGAGAAA
TGACAATGAGCGATCTCAACTTGCATTTGTTACCTTCAAGGATTCAAAAGGGGCAGAGACGTCGATTCTACTCTCGGGAGCTACAATTGTCGATCAGCCAGTAAGCATTT
CTTCGGCTCCAGATTACAACCTTCCTGCAGTTGATGCCAGTGCCCCTGTAGCTGTACCCGTGTCTACTCCTGCTTTAGACAACACAACCTCTACTACTAATTCTACTGCT
GGATCTGCAATGCAAAAGGCAGAGGATGTTGTCAGCAGCATGCTAGCCAAAGGCTTCACTTTGGGCAAAGATGCCCTTAATAAGGCGAAGTCTTTTGACGAAAGGCACCA
ATTGACTTCAACAGCCTCATCCAAAGTTGCTTCTCTGGACCAAAAAATCGGCCTTAGTGAGAAAATTAGTGTTGGCACTACCGTGGTGAATGAGAAAGTGAGGGAAATGG
ATGAGAAGTTTCAAGTGTCTGAGAAGACTAAGGCAGCTGTGAGCAACGCTGGATCAGCTATAATGACTAACCGCTACGTCTTAACCGGGGCTTCCTGGGTTAGCCAGACA
TTTCAACGAGTTGCAAAAGCTGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGCTGAGGAGGATCAAGGGAAACATGTGGGAAATTCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACGAGGACGGTGAGAGTTACCAATGTCTCCTTAAGCGCGACAGAGAAAGATTTGAGAGACTTCTTTTCCTTTTCCGGTGAAATTGAATTTGTCGAAATGAGAAA
TGACAATGAGCGATCTCAACTTGCATTTGTTACCTTCAAGGATTCAAAAGGGGCAGAGACGTCGATTCTACTCTCGGGAGCTACAATTGTCGATCAGCCAGTAAGCATTT
CTTCGGCTCCAGATTACAACCTTCCTGCAGTTGATGCCAGTGCCCCTGTAGCTGTACCCGTGTCTACTCCTGCTTTAGACAACACAACCTCTACTACTAATTCTACTGCT
GGATCTGCAATGCAAAAGGCAGAGGATGTTGTCAGCAGCATGCTAGCCAAAGGCTTCACTTTGGGCAAAGATGCCCTTAATAAGGCGAAGTCTTTTGACGAAAGGCACCA
ATTGACTTCAACAGCCTCATCCAAAGTTGCTTCTCTGGACCAAAAAATCGGCCTTAGTGAGAAAATTAGTGTTGGCACTACCGTGGTGAATGAGAAAGTGAGGGAAATGG
ATGAGAAGTTTCAAGTGTCTGAGAAGACTAAGGCAGCTGTGAGCAACGCTGGATCAGCTATAATGACTAACCGCTACGTCTTAACCGGGGCTTCCTGGGTTAGCCAGACA
TTTCAACGAGTTGCAAAAGCTGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGCTGAGGAGGATCAAGGGAAACATGTGGGAAATTCTTCTTAA
Protein sequenceShow/hide protein sequence
MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTTSTTNSTA
GSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQT
FQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS