; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G19116 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G19116
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionbinding partner of ACD11 1-like
Genome locationctg35:722071..723211
RNA-Seq ExpressionCucsat.G19116
SyntenyCucsat.G19116
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652335.1 hypothetical protein Csa_022102 [Cucumis sativus]8.93e-17399.25Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT
        +QSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRV DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

XP_004151849.1 binding partner of ACD11 1 [Cucumis sativus]1.64e-17599.62Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT
        MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRV DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

XP_008462804.1 PREDICTED: binding partner of ACD11 1-like [Cucumis melo]7.76e-17498.87Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT
        MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRRE+QEVRV DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENNSPS EDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

XP_022950330.1 binding partner of ACD11 1 [Cucurbita moschata]2.90e-16292.45Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT
        MQSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAEN+VPRREMQEVR  DNAA LT
Subjt:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENN PSIEDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        KTMAAIFAAERK+NDTGSAVKTSKYVT+ AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

XP_038881171.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]4.53e-16695.47Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT
        MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+ AENHVPRREMQEVRV DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENN PS EDSASQPSSGKMYVNRAQ VVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQ LHVSD
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        KTMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

TrEMBL top hitse value%identityAlignment
A0A0A0LNE8 RRM domain-containing protein7.93e-17699.62Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT
        MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRV DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

A0A1S3CIA3 binding partner of ACD11 1-like3.76e-17498.87Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT
        MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRRE+QEVRV DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENNSPS EDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

A0A5D3BPG7 Binding partner of ACD11 1-like3.76e-17498.87Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT
        MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRRE+QEVRV DNAACLT
Subjt:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENNSPS EDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

A0A6J1GFF4 binding partner of ACD11 11.41e-16292.45Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT
        MQSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAEN+VPRREMQEVR  DNAA LT
Subjt:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENN PSIEDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        KTMAAIFAAERK+NDTGSAVKTSKYVT+ AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

A0A6J1IKN1 binding partner of ACD11 11.41e-16292.45Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT
        MQSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAEN+VPRREMQEVR  DNAA LT
Subjt:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENN PSIEDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        KTMAAIFAAERK+NDTGSAVKTSKYVT+ AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

SwissProt top hitse value%identityAlignment
P87216 Protein vip11.8e-0623.83Show/hide
Query:  VQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLTPTENNSP
        V V ++S   TE++I +FFSF G++ +I  + + GE++TA + F  P A + ALLL  A +    + IT  +        Q    GD AA          
Subjt:  VQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLTPTENNSP

Query:  SIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIF
               +P S          +++ +L++G  +    + K+   D+ + +++             G+ E    G+  VNE+    ++   V +K     F
Subjt:  SIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIF

Query:  AAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLI
        A   KLN T S V T  +     A           AG +AG K +  +    + L+
Subjt:  AAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLI

Q9LFD5 Binding partner of ACD11 18.7e-4642.52Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT
        M SQ R+V+V ++S  ATE +I EFFSFSGE+E I+IQ  +    +A+VTF + +  E A+LLSGA+I D+ V I  A N+ P                 
Subjt:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
              P+   + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQ   V++
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
        +T +   AAE+ ++  GSAV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-5145.63Show/hide
Query:  TVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLTPTENNS
        TV+V +VS  AT+R++ EFFSFSG+I ++E Q E   +K A+VTF D +  E A+LLSGATIVD  V ++ A ++                 L+P    S
Subjt:  TVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLTPTENNS

Query:  PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAI
           +DS   P +G   + +A++VV+++LAKG  +G+DA+ KAK+ DEKHQLT++ASAKV SFD+++G T+K+  G  VV EKV+ VDQK  VS+KT +AI
Subjt:  PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAI

Query:  FAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA
         AAE+ +++ GSA+  ++YV   A W+ GAF KVAKA +  G K +EK  +A
Subjt:  FAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA

AT5G16840.1 binding partner of acd11 16.2e-4742.52Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT
        M SQ R+V+V ++S  ATE +I EFFSFSGE+E I+IQ  +    +A+VTF + +  E A+LLSGA+I D+ V I  A N+ P                 
Subjt:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
              P+   + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQ   V++
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
        +T +   AAE+ ++  GSAV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

AT5G16840.2 binding partner of acd11 14.7e-4742.91Show/hide
Query:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT
        M SQ R+V+V ++S  ATE +I EFFSFSGE+E I+IQ     S  A+VTF + +  E A+LLSGA+I D+ V I  A N+ P                 
Subjt:  MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLT

Query:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD
              P+   + +Q S  +  V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S+VNEK+K+VDQ   V++
Subjt:  PTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK
        +T +   AAE+ ++  GSAV  ++YV    +W  GAF +VA+A    G KT+EK
Subjt:  KTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREK

AT5G32450.1 RNA binding (RRM/RBD/RNP motifs) family protein5.9e-9874.33Show/hide
Query:  TRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLTPTEN
        TR+VQV +VSDLATEREIHEFFSFSG+IEHIEIQ E G+S+ AFVTFTDPKALEIALLLSGATIVD+IV+IT AEN+V RRE QEVR+ DNA  L   E+
Subjt:  TRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLTPTEN

Query:  NSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMA
         +   +   +   + + YV++AQ+VVATVLAKGSA+GQDA+NKAKAFDEKHQL A+ASAKV SFD+RVGLTEKL+VGIS VNEKVKSVDQKL VSDKTMA
Subjt:  NSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMA

Query:  AIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK
        AIFAAERKLNDTGSAVK+S+YVTA AAW +GAF KVA+ GQ AG+KT+EKF+LA+SN+ SK
Subjt:  AIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISK

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.7e-5044.05Show/hide
Query:  TVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLTPTENNS
        TV+V +VS  ATER++ EFFSFSG+I ++E Q E   SK A+VTF D +  E A+LL+G+TIVD  V++T +    P  ++    +    +     +++S
Subjt:  TVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVDKIVSITPAENHVPRREMQEVRVGDNAACLTPTENNS

Query:  PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAI
        P+ ED +           +A++VV+ +++KG  +G+DA+ KAK+ DEKHQLT++ASA+V SFD+R+G TEK+  G +VV+EKVK VDQK  V++KT +AI
Subjt:  PSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAI

Query:  FAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA
         AAE+ +++ GSA+  ++YV   A W+ GAF +V+KA +  G K +EK  LA
Subjt:  FAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGCTCTTATTTTCTTTCAAATTTCCTCCAAAGCTCCAACCTGTACAAACTTCCTCTCTCTCTCTCTCTCTCTCTCTCTACAAGAAATTCTTCGTATTCTTCTATCATTTT
CATTAGAGCTATGCAGTCTCAGACTAGGACGGTTCAAGTCAAGCACGTTTCGGATCTAGCTACTGAGAGGGAGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAGC
ACATAGAGATTCAATGTGAACAAGGGGAATCCAAGACTGCGTTTGTTACATTTACAGATCCTAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTGGAT
AAGATCGTGAGCATAACTCCTGCTGAAAATCATGTACCAAGAAGAGAAATGCAGGAAGTACGGGTTGGAGACAATGCTGCATGTCTCACGCCTACAGAAAATAATTCTCC
TAGCATTGAGGATTCTGCGAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTCGCAACTGTGCTTGCTAAAGGTTCAGCAATTGGACAAGATG
CCATGAACAAGGCAAAAGCATTTGACGAAAAACATCAGTTAACAGCCAGTGCATCTGCAAAAGTATTATCCTTTGACAGAAGGGTTGGGCTTACAGAGAAATTAACAGTT
GGGATATCAGTGGTTAACGAGAAAGTCAAGTCTGTGGATCAAAAGCTTCATGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGG
CTCTGCTGTCAAAACAAGCAAGTATGTGACAGCAAGTGCTGCATGGCTAAATGGCGCTTTTGGCAAGGTCGCTAAAGCAGGGCAAGCAGCAGGTACAAAAACCAGAGAAA
AGTTCCATTTGGCTATGTCAAACTTAATTTCAAAGGTGCGTTTTAGAAATGAAACTCTTTTCTATGACGACTTTAAAGTTGAGATTCTTTGGGAAATAGCTTTCTTGTGA
mRNA sequenceShow/hide mRNA sequence
TGCTCTTATTTTCTTTCAAATTTCCTCCAAAGCTCCAACCTGTACAAACTTCCTCTCTCTCTCTCTCTCTCTCTCTCTACAAGAAATTCTTCGTATTCTTCTATCATTTT
CATTAGAGCTATGCAGTCTCAGACTAGGACGGTTCAAGTCAAGCACGTTTCGGATCTAGCTACTGAGAGGGAGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAGC
ACATAGAGATTCAATGTGAACAAGGGGAATCCAAGACTGCGTTTGTTACATTTACAGATCCTAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACAATTGTGGAT
AAGATCGTGAGCATAACTCCTGCTGAAAATCATGTACCAAGAAGAGAAATGCAGGAAGTACGGGTTGGAGACAATGCTGCATGTCTCACGCCTACAGAAAATAATTCTCC
TAGCATTGAGGATTCTGCGAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTCGCAACTGTGCTTGCTAAAGGTTCAGCAATTGGACAAGATG
CCATGAACAAGGCAAAAGCATTTGACGAAAAACATCAGTTAACAGCCAGTGCATCTGCAAAAGTATTATCCTTTGACAGAAGGGTTGGGCTTACAGAGAAATTAACAGTT
GGGATATCAGTGGTTAACGAGAAAGTCAAGTCTGTGGATCAAAAGCTTCATGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGG
CTCTGCTGTCAAAACAAGCAAGTATGTGACAGCAAGTGCTGCATGGCTAAATGGCGCTTTTGGCAAGGTCGCTAAAGCAGGGCAAGCAGCAGGTACAAAAACCAGAGAAA
AGTTCCATTTGGCTATGTCAAACTTAATTTCAAAGGTGCGTTTTAGAAATGAAACTCTTTTCTATGACGACTTTAAAGTTGAGATTCTTTGGGAAATAGCTTTCTTGTGA
Protein sequenceShow/hide protein sequence
CSYFLSNFLQSSNLYKLPLSLSLSLSTRNSSYSSIIFIRAMQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLSGATIVD
KIVSITPAENHVPRREMQEVRVGDNAACLTPTENNSPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV
GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLISKVRFRNETLFYDDFKVEILWEIAFL