; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G19240 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G19240
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
Genome locationctg36:373867..376579
RNA-Seq ExpressionCucsat.G19240
SyntenyCucsat.G19240
Gene Ontology termsGO:0007015 - actin filament organization (biological process)
GO:0009860 - pollen tube growth (biological process)
GO:0030050 - vesicle transport along actin filament (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016459 - myosin complex (cellular component)
GO:0031982 - vesicle (cellular component)
GO:0000146 - microfilament motor activity (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR041679 - DNA2/NAM7 helicase-like, C-terminal
IPR045055 - DNA2/NAM7-like helicase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031736100.1 helicase sen1 isoform X1 [Cucumis sativus]4.00e-17795.79Show/hide
Query:  MSANCQHWFRAIMHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKM
        MSANCQHWFRAIMHPSISLFPNSKFYSSQISDGPNVK KAYEKTF+ GPMF SYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKM
Subjt:  MSANCQHWFRAIMHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKM

Query:  SIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVM
        SIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGG EDIIIISTV CNTGSSI FL SNQRTNVALTRARYCLW LGN KTLSKSNSVWEELVM
Subjt:  SIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVM

Query:  DAKNHGCFFNANANAITKDIQQIVPLLDYFNSNDEGRSLEIMEGKNVEDHESKAKRLLQLL
        DAKN GCFFNANANAITKDIQQIVPLLDYFNSNDEGRSLEIMEGKNVEDHESKAKRLLQLL
Subjt:  DAKNHGCFFNANANAITKDIQQIVPLLDYFNSNDEGRSLEIMEGKNVEDHESKAKRLLQLL

XP_031736102.1 helicase sen1 isoform X2 [Cucumis sativus]1.91e-17794.74Show/hide
Query:  MSANCQHWFRAIMHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKM
        MSANCQHWFRAIMHPSISLFPNSKFYSSQISDGPNVK KAYEKTF+ GPMF SYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKM
Subjt:  MSANCQHWFRAIMHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKM

Query:  SIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVM
        SIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGG EDIIIISTV CNTGSSI FL SNQRTNVALTRARYCLW LGN KTLSKSNSVWEELVM
Subjt:  SIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVM

Query:  DAKNHGCFFNANANAITKDIQQIVPLLDYFNSNDEGRSLEIMEGKNVEDHESKAKRLLQLL--WQD
        DAKN GCFFNANANAITKDIQQIVPLLDYFNSNDEGRSLEIMEGKNVEDHESKAKRLLQLL  W D
Subjt:  DAKNHGCFFNANANAITKDIQQIVPLLDYFNSNDEGRSLEIMEGKNVEDHESKAKRLLQLL--WQD

XP_031736106.1 helicase sen1 isoform X3 [Cucumis sativus]8.55e-18095.45Show/hide
Query:  MSANCQHWFRAIMHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKM
        MSANCQHWFRAIMHPSISLFPNSKFYSSQISDGPNVK KAYEKTF+ GPMF SYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKM
Subjt:  MSANCQHWFRAIMHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKM

Query:  SIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVM
        SIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGG EDIIIISTV CNTGSSI FL SNQRTNVALTRARYCLW LGN KTLSKSNSVWEELVM
Subjt:  SIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVM

Query:  DAKNHGCFFNANANAITKDIQQIVPLLDYFNSNDEGRSLEIMEGKNVEDHESKAKRLLQLLWQD
        DAKN GCFFNANANAITKDIQQIVPLLDYFNSNDEGRSLEIMEGKNVEDHESKAKRLLQLLW+D
Subjt:  DAKNHGCFFNANANAITKDIQQIVPLLDYFNSNDEGRSLEIMEGKNVEDHESKAKRLLQLLWQD

XP_031737582.1 uncharacterized ATP-dependent helicase C29A10.10c isoform X1 [Cucumis sativus]4.88e-192100Show/hide
Query:  MSANCQHWFRAIMHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKM
        MSANCQHWFRAIMHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKM
Subjt:  MSANCQHWFRAIMHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKM

Query:  SIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVM
        SIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVM
Subjt:  SIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVM

Query:  DAKNHGCFFNANANAITKDIQQIVPLLDYFNSNDEGRSLEIMEGKNVEDHESKAKRLLQLLWQD
        DAKNHGCFFNANANAITKDIQQIVPLLDYFNSNDEGRSLEIMEGKNVEDHESKAKRLLQLLWQD
Subjt:  DAKNHGCFFNANANAITKDIQQIVPLLDYFNSNDEGRSLEIMEGKNVEDHESKAKRLLQLLWQD

XP_031737586.1 probable helicase MAGATAMA 3 isoform X2 [Cucumis sativus]1.27e-121100Show/hide
Query:  MSANCQHWFRAIMHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKM
        MSANCQHWFRAIMHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKM
Subjt:  MSANCQHWFRAIMHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKM

Query:  SIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRAR
        SIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRAR
Subjt:  SIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRAR

TrEMBL top hitse value%identityAlignment
A0A1S3CEY4 uncharacterized protein LOC1035001001.14e-8869.44Show/hide
Query:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSL---SQACVDSKGKMSIGVVSPYS
        MHPSIS FPNSKFYS+QISDGPNVK + Y K FL GPMF SYSF++IN  REEKD I  S KNM EVDVVL+I+H L   +  CVDS  K+SIGVVSPYS
Subjt:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSL---SQACVDSKGKMSIGVVSPYS

Query:  AQVVTIQRKIGKKYN-CNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCF
        AQV  I+ K+G+ YN  N F V+VSSVDGFQGG EDIIIISTV  N  SSIGFLSSNQRTNVALTRARYCLWILGN  TLS S+S+WE+LV DAKN GCF
Subjt:  AQVVTIQRKIGKKYN-CNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCF

Query:  FNANANAITKDIQQIV
        FNA  +   KD+  ++
Subjt:  FNANANAITKDIQQIV

A0A5B7AXI3 Putative helicase MAGATAMA 3 (Fragment)1.13e-8968.66Show/hide
Query:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQV
        MHPSISLFPNSKFY +QI D PNV++K YE+ +LPGPMF  YSFINI G +EE  ++GHS +N+VE+ VVLKIVH+L +A   SK K+SIGVVSPY+AQV
Subjt:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQV

Query:  VTIQRKIGKKY-NCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCFFNA
        VTIQ K+GKKY N + F VKV S+DGFQGG EDIIIISTV  NTG  +GFLSS QRTNVALTRAR+CLWILGN +TL+KS SVWE L+ DA+   C FNA
Subjt:  VTIQRKIGKKY-NCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCFFNA

Query:  N
        +
Subjt:  N

A0A5C7HKA8 Uncharacterized protein4.12e-8360Show/hide
Query:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQV
        MHPSIS FPNS+FY +QI DGPNVK+++YE+ +LPGPMF  YSFINI G RE+  E+GHS  NMVEV VV+ I+ +L +A + SK K+SIGVVSPY AQV
Subjt:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQV

Query:  VTIQRKIGKKY-NCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCFFNA
        V IQ+++G+KY N +GF VKV SVDGFQGG EDIIIISTV CN G  IGFLS  QR NVALTRARYCLWILGN +TL++S SVW+ LV DAK+  CFFNA
Subjt:  VTIQRKIGKKY-NCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCFFNA

Query:  NANA-ITKDIQQIVPLLDYFNSND--EGRSLEIMEGKNVE
        + +  + + I ++    D F+     E  S E  + K++E
Subjt:  NANA-ITKDIQQIVPLLDYFNSND--EGRSLEIMEGKNVE

A0A5D3CGE7 Regulator of nonsense transcripts 1-like protein4.57e-9269.44Show/hide
Query:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSL---SQACVDSKGKMSIGVVSPYS
        MHPSIS FPNSKFYS+QISDGPNVK + Y K FL GPMF SYSF++IN  REEKD I  S KNM EVDVVL+I+H L   +  CVDS  K+SIGVVSPYS
Subjt:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSL---SQACVDSKGKMSIGVVSPYS

Query:  AQVVTIQRKIGKKYN-CNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCF
        AQV  I+ K+G+ YN  N F V+VSSVDGFQGG EDIIIISTV  N  SSIGFLSSNQRTNVALTRARYCLWILGN  TLS S+S+WE+LV DAKN GCF
Subjt:  AQVVTIQRKIGKKYN-CNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCF

Query:  FNANANAITKDIQQIV
        FNA  +   KD+  ++
Subjt:  FNANANAITKDIQQIV

A0A6J1CTS8 LOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like1.10e-9878.82Show/hide
Query:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEK-DEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQ
        MHPSISLFPNSKFYS+QISDGPNVKAK Y K+FLPGPMF SYSFI+IN  REEK D +GHS +NM EV +VLKI+H+LS+ACV SK K+SIGVVSPYSAQ
Subjt:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEK-DEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQ

Query:  VVTIQRKIGKKYN-CNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCFFN
        V  IQ K+G+KYN C GF VKVSSVDGFQGG EDIIIISTV  N+GSSIGFLSSNQR NVALTRARYCLWILGN   LSKSNSV EELV+DAKN GCFF 
Subjt:  VVTIQRKIGKKYN-CNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCFFN

Query:  ANA
        A+A
Subjt:  ANA

SwissProt top hitse value%identityAlignment
B6SFA4 Probable helicase MAGATAMA 33.2e-2228.87Show/hide
Query:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDE-IGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQ
        MHP I  FP+ +FY   + DG +++A+   + +     F  + F +I+  +E +      S  N+ EV+ VL I H L     + K    + ++SPY+ Q
Subjt:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDE-IGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQ

Query:  VVTIQRKIGKKYNCNGFN-VKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCFFN
        V T + +  + +       V +++VDGFQG  +D+ I S V  N    IGFLS+++R NV +TRA+  + ++G+  TL KS+ +W+ L+  A+     F 
Subjt:  VVTIQRKIGKKYNCNGFN-VKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCFFN

Query:  ANANAITKDIQQIVPLLDYFNSNDEGRSLEIMEGKNVED
         +            PL ++F S +   ++++ E   + D
Subjt:  ANANAITKDIQQIVPLLDYFNSNDEGRSLEIMEGKNVED

O94387 Uncharacterized ATP-dependent helicase C29A10.10c2.2e-2635.34Show/hide
Query:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQV
        M+P IS FP+  FY+S++ DGPN+ A    + +   P    Y F N++G   E      SL N+ E   +L +   L Q  ++   +  IGVV+PY +QV
Subjt:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQV

Query:  VTIQRKIGKKYNCNGF-NVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCFFNA
          ++ +  +KY    F ++ + +VDGFQG  +DIII S V  +    IGFL   +R NVALTRA+  L+I+GN K L + + ++  L+ DAK  G + + 
Subjt:  VTIQRKIGKKYNCNGF-NVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCFFNA

Query:  NANAI--TKDIQQIVPLLDYFNSNDEGRSLEI
        +AN    +K I  +   L   N N   R   I
Subjt:  NANAI--TKDIQQIVPLLDYFNSNDEGRSLEI

Q00416 Helicase SEN19.7e-2733.93Show/hide
Query:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQAC---VDSKGKMSIGVVSPYS
        MHPSIS FP+S+FY  ++ DGP +            P+   Y F +I   R+E++    S  NM E+ V +++V  L +     +D  GK  IG++SPY 
Subjt:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQAC---VDSKGKMSIGVVSPYS

Query:  AQVVTIQRKIGKKY-NCNGFNVKVSSVDGFQGGVEDIIIISTVWC-NTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGC
         Q+  ++++  + +      ++  +++DGFQG  ++II+IS V   +T SS+GFL   +R NVALTRA+  +W+LG+ ++L+KS  +W +L+ DAK+  C
Subjt:  AQVVTIQRKIGKKY-NCNGFNVKVSSVDGFQGGVEDIIIISTVWC-NTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGC

Query:  FFNANANAITKDIQQIVPLLDYFN
           A +  +     +   +L  FN
Subjt:  FFNANANAITKDIQQIVPLLDYFN

Q92355 Helicase sen15.3e-2537.7Show/hide
Query:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQV
        MHP IS FP+ KFY S++ DG N+  K  ++ +   P F  Y   ++ G  +E+     S  N+ EV+ ++ +V  L     D      IGV++PY +Q+
Subjt:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQV

Query:  VTIQRKIGKKYNCNGFN-VKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDA
          ++R    KY  +  + + + +VDGFQG  +DII  S V   +   IGFL   +R NVALTRAR  L I+GN++TL K++ +W  LV DA
Subjt:  VTIQRKIGKKYNCNGFN-VKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDA

Q9FJR0 Regulator of nonsense transcripts 1 homolog3.2e-2234.58Show/hide
Query:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHS-LSQACVDSKGKMSIGVVSPYSAQ
        MHP++S FP++ FY   + +G  +  +       P P+ +   F  +   +EE    G S  N  E   V K+V + L    V S+    IGV++PY  Q
Subjt:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHS-LSQACVDSKGKMSIGVVSPYSAQ

Query:  ---VVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCF
           +V    + G         ++V+SVD FQG  +D II+S V  N    IGFL+  +R NVALTRARY + ILGN K LSK   +W  L+   K H C 
Subjt:  ---VVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCF

Query:  FNANANAITKDIQQ
             N + + + Q
Subjt:  FNANANAITKDIQQ

Arabidopsis top hitse value%identityAlignment
AT1G65810.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein5.2e-6055.66Show/hide
Query:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQV
        MHPSIS+FPN +FY  +I D P+V+ ++YEK FLP  M+  YSFINI   RE+  E G+S KN+VEV VV +IV  L      +   +S+GV+SPY AQV
Subjt:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQV

Query:  VTIQRKIGKKYNCNG-FNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCFFNA
          IQ +IG+KYN  G F V V SVDGFQGG EDIIIISTV  N   +IGFLS+ QRTNVALTRARYCLWILGN  TL+ + SVW +LV DAK   CF NA
Subjt:  VTIQRKIGKKYNCNG-FNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCFFNA

Query:  NAN-AITKDIQQIVPLLDYFN
          + ++ + I++    LD  N
Subjt:  NAN-AITKDIQQIVPLLDYFN

AT1G65810.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein5.2e-6055.66Show/hide
Query:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQV
        MHPSIS+FPN +FY  +I D P+V+ ++YEK FLP  M+  YSFINI   RE+  E G+S KN+VEV VV +IV  L      +   +S+GV+SPY AQV
Subjt:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQV

Query:  VTIQRKIGKKYNCNG-FNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCFFNA
          IQ +IG+KYN  G F V V SVDGFQGG EDIIIISTV  N   +IGFLS+ QRTNVALTRARYCLWILGN  TL+ + SVW +LV DAK   CF NA
Subjt:  VTIQRKIGKKYNCNG-FNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCFFNA

Query:  NAN-AITKDIQQIVPLLDYFN
          + ++ + I++    LD  N
Subjt:  NAN-AITKDIQQIVPLLDYFN

AT5G37150.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein5.1e-5552.97Show/hide
Query:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQV
        MHPSIS FPN +FY  +I D  NVK   Y+K FL G MF S+SFIN+   +EE  + GHS KNMVEV VV +I+ +L +   + + K+S+GVVSPY  Q+
Subjt:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQV

Query:  VTIQRKIGKKYNC---NGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCFF
          IQ KIG KY+      F + V SVDGFQGG EDIIIISTV  N+   +GFL++ QR NVALTRAR+CLW++GN  TL+ S S+W  L+ +++  GCF+
Subjt:  VTIQRKIGKKYNC---NGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCFF

Query:  NA
        +A
Subjt:  NA

AT5G37160.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.4e-5748.95Show/hide
Query:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQV
        MHPSIS FPN +FY  +I+D  NV+   YEK FL G MF ++SFIN+   +EE  + GHS KNMVEV V+ KI+ +L +     K KMS+GV+SPY  QV
Subjt:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQV

Query:  VTIQRKIGKKYNCNG----FNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCF
          IQ ++G KYN       F + V SVDGFQGG  D+IIISTV CN   ++GFLS+ QR NVALTRAR+CLW++GN  TL+ S S+W EL+ +++  GCF
Subjt:  VTIQRKIGKKYNCNG----FNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCF

Query:  FNANANAITKDIQQIVPLLDYFNSNDEGRSLEIMEGK
        ++A  +   +D      L D  +S     SL I  G+
Subjt:  FNANANAITKDIQQIVPLLDYFNSNDEGRSLEIMEGK

AT5G52090.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein7.8e-5649.78Show/hide
Query:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQV
        MHPSIS FPN +FY  +I D  NVK   Y+K FL G MFDS+SFIN+   +EE  + GHS KNMVEV V+ +I+ +L +   + + K+S+GVVSPY  Q+
Subjt:  MHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQV

Query:  VTIQRKIGKKYNC---NGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCFF
          IQ KIG KY+      F + V SVDGFQGG EDIIIISTV  N    +GFL++ QR NVALTRAR+CLW++GN  TL+ S S+W  L+ +++  GCF 
Subjt:  VTIQRKIGKKYNC---NGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCFF

Query:  NANANAITKDIQQIVPLLDYFNS
        +A      +D      L D  +S
Subjt:  NANANAITKDIQQIVPLLDYFNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGACATTTACTAAGGTGATGAGTGCCAATTGCCAGCATTGGTTTAGAGCAATAATGCATCCATCCATAAGCCTTTTCCCAAACTCAAAATTCTACTCAAGTCAGATCTC
AGATGGTCCTAATGTCAAAGCTAAAGCCTATGAAAAGACGTTTCTTCCCGGACCGATGTTCGATTCGTATTCTTTCATAAACATAAATGGTGCACGAGAAGAAAAGGATG
AAATTGGACACAGTTTGAAAAACATGGTAGAGGTTGATGTTGTGCTCAAAATTGTTCATTCTTTGTCTCAAGCATGTGTTGACTCAAAAGGAAAGATGAGCATTGGTGTA
GTGTCCCCATATTCAGCTCAAGTCGTTACCATTCAACGCAAAATTGGGAAGAAGTACAATTGTAATGGATTTAATGTGAAGGTGAGTTCAGTTGATGGCTTTCAAGGAGG
GGTGGAAGATATCATTATTATTTCCACTGTTTGGTGTAATACAGGATCGTCCATCGGGTTTTTGTCGAGTAATCAAAGAACAAATGTCGCACTTACAAGAGCTAGGTACT
GTTTGTGGATATTGGGAAACATCAAAACACTGTCAAAGAGTAACTCGGTTTGGGAAGAGTTGGTTATGGATGCCAAGAATCATGGCTGTTTCTTCAATGCTAATGCCAAT
GCCATAACCAAAGACATCCAACAGATAGTTCCACTACTGGATTATTTCAACTCCAATGATGAAGGAAGAAGCTTGGAGATAATGGAGGGAAAGAACGTAGAAGATCATGA
ATCCAAGGCCAAGAGGCTGCTGCAGTTGTTGTGGCAAGATTAA
mRNA sequenceShow/hide mRNA sequence
GAGACATTTACTAAGGTGATGAGTGCCAATTGCCAGCATTGGTTTAGAGCAATAATGCATCCATCCATAAGCCTTTTCCCAAACTCAAAATTCTACTCAAGTCAGATCTC
AGATGGTCCTAATGTCAAAGCTAAAGCCTATGAAAAGACGTTTCTTCCCGGACCGATGTTCGATTCGTATTCTTTCATAAACATAAATGGTGCACGAGAAGAAAAGGATG
AAATTGGACACAGTTTGAAAAACATGGTAGAGGTTGATGTTGTGCTCAAAATTGTTCATTCTTTGTCTCAAGCATGTGTTGACTCAAAAGGAAAGATGAGCATTGGTGTA
GTGTCCCCATATTCAGCTCAAGTCGTTACCATTCAACGCAAAATTGGGAAGAAGTACAATTGTAATGGATTTAATGTGAAGGTGAGTTCAGTTGATGGCTTTCAAGGAGG
GGTGGAAGATATCATTATTATTTCCACTGTTTGGTGTAATACAGGATCGTCCATCGGGTTTTTGTCGAGTAATCAAAGAACAAATGTCGCACTTACAAGAGCTAGGTACT
GTTTGTGGATATTGGGAAACATCAAAACACTGTCAAAGAGTAACTCGGTTTGGGAAGAGTTGGTTATGGATGCCAAGAATCATGGCTGTTTCTTCAATGCTAATGCCAAT
GCCATAACCAAAGACATCCAACAGATAGTTCCACTACTGGATTATTTCAACTCCAATGATGAAGGAAGAAGCTTGGAGATAATGGAGGGAAAGAACGTAGAAGATCATGA
ATCCAAGGCCAAGAGGCTGCTGCAGTTGTTGTGGCAAGATTAA
Protein sequenceShow/hide protein sequence
ETFTKVMSANCQHWFRAIMHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGV
VSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSKSNSVWEELVMDAKNHGCFFNANAN
AITKDIQQIVPLLDYFNSNDEGRSLEIMEGKNVEDHESKAKRLLQLLWQD