; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G19242 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G19242
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionPentatricopeptide repeat-containing protein
Genome locationctg36:435278..436835
RNA-Seq ExpressionCucsat.G19242
SyntenyCucsat.G19242
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653086.1 hypothetical protein Csa_019584 [Cucumis sativus]4.56e-22299.68Show/hide
Query:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF
        MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF
Subjt:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF

Query:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
        VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHC+AVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
Subjt:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR

Query:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA
        LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA
Subjt:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA

Query:  IMEYKPNE
        IMEYKPNE
Subjt:  IMEYKPNE

TYK26926.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]9.20e-21297.73Show/hide
Query:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF
        MNLNGVKFDSVTYTTALSFCLD E+FLFGWQLHTLALKCG K DVFVGNALVTMYSR EHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF
Subjt:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF

Query:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
        VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
Subjt:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR

Query:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA
        LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVF+ELPYREIISWNALISGYAQNALCQEALEAF YA
Subjt:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA

Query:  IMEYKPNE
        IMEYKPNE
Subjt:  IMEYKPNE

XP_004150024.3 pentatricopeptide repeat-containing protein At4g32430, mitochondrial [Cucumis sativus]3.41e-21899.68Show/hide
Query:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF
        MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF
Subjt:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF

Query:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
        VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHC+AVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
Subjt:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR

Query:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA
        LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA
Subjt:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA

Query:  IMEYKPNE
        IMEYKPNE
Subjt:  IMEYKPNE

XP_008444010.1 PREDICTED: pentatricopeptide repeat-containing protein At4g32430, mitochondrial [Cucumis melo]1.50e-21097.08Show/hide
Query:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF
        MNLNGVKFDSVTYTTALSFCLD E+FLFGWQLH+LALKCG + DVFVGNALVTMYSR EHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF
Subjt:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF

Query:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
        VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
Subjt:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR

Query:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA
        LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVF+ELPYREIISWNALISGYAQNALCQEALEAF YA
Subjt:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA

Query:  IMEYKPNE
        IMEYKPNE
Subjt:  IMEYKPNE

XP_038878737.1 pentatricopeptide repeat-containing protein At4g32430, mitochondrial isoform X2 [Benincasa hispida]6.90e-20392.53Show/hide
Query:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF
        MNLNGVKFD VTYTTAL+FCLDGE+FLFGWQLHTLALKCG KGDVFVGNAL+TMYSRWEHLVDAR+VFDEM SRDRVSWSAM+TGYAQEGD+GL+AIL+F
Subjt:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF

Query:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
        +QMVREGVKFDNV ITGALSVCGHERNLELGKQIHCL VKTG+ETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
Subjt:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR

Query:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA
        LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSEL +GNSLITMYAKFE MQDASRVF+ELPYREIISWNALISGYAQN LCQEALE FL A
Subjt:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA

Query:  IMEYKPNE
        IME KPNE
Subjt:  IMEYKPNE

TrEMBL top hitse value%identityAlignment
A0A1S3BA52 pentatricopeptide repeat-containing protein At4g32430, mitochondrial7.25e-21197.08Show/hide
Query:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF
        MNLNGVKFDSVTYTTALSFCLD E+FLFGWQLH+LALKCG + DVFVGNALVTMYSR EHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF
Subjt:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF

Query:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
        VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
Subjt:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR

Query:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA
        LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVF+ELPYREIISWNALISGYAQNALCQEALEAF YA
Subjt:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA

Query:  IMEYKPNE
        IMEYKPNE
Subjt:  IMEYKPNE

A0A5A7TTA5 Pentatricopeptide repeat-containing protein7.25e-21197.08Show/hide
Query:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF
        MNLNGVKFDSVTYTTALSFCLD E+FLFGWQLH+LALKCG + DVFVGNALVTMYSR EHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF
Subjt:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF

Query:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
        VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
Subjt:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR

Query:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA
        LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVF+ELPYREIISWNALISGYAQNALCQEALEAF YA
Subjt:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA

Query:  IMEYKPNE
        IMEYKPNE
Subjt:  IMEYKPNE

A0A5D3DTC6 Pentatricopeptide repeat-containing protein4.46e-21297.73Show/hide
Query:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF
        MNLNGVKFDSVTYTTALSFCLD E+FLFGWQLHTLALKCG K DVFVGNALVTMYSR EHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF
Subjt:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF

Query:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
        VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
Subjt:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR

Query:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA
        LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVF+ELPYREIISWNALISGYAQNALCQEALEAF YA
Subjt:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA

Query:  IMEYKPNE
        IMEYKPNE
Subjt:  IMEYKPNE

A0A6J1EK48 pentatricopeptide repeat-containing protein At4g32430, mitochondrial2.18e-19488.31Show/hide
Query:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF
        MNLNGV+FD VTYTTAL+FCLDGE+F+FGWQLHTL LKCGF+ D+FVGNAL+TMYSRWEHLVDAR+VFDEM SRDRVSWSAMITGYAQEGD+GL+AILVF
Subjt:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF

Query:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
        +QMVREGVKFDNV ITGA+SVCGHERNLELGKQIHCL VK G ETHTSVGNVLISTYSKCE+I+DAK+VFE+I+DRNVISWTTMISLYEE AVSLFN+MR
Subjt:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR

Query:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA
        LDGVYPNDVTFIGLLHAIT+RNMVEQGLMVHGLCIKADFV+EL VGNSLITMYAKFE MQDASRVF+ELPYREIISWNALISGYAQN LCQEALE FL A
Subjt:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA

Query:  IMEYKPNE
        IME KPNE
Subjt:  IMEYKPNE

A0A6J1KH73 pentatricopeptide repeat-containing protein At4g32430, mitochondrial5.43e-19588.96Show/hide
Query:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF
        MNLNGV+FD VTYTTAL+FCLDGE+F+FGWQLHTL LKCGF+ DVFVGNAL+TMYSRWEHLVDAR+VFDEM SRDRVSWSAMITGYAQEGD+GL+AILVF
Subjt:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF

Query:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
        +QMVREGVKFDNV ITGA+SVCGHERNLELGKQIHCL VK G ETHTSVGNVLISTYSKCE+IEDAK+VFE+I+DRNVISWTTMISLYEE AVSLFN+MR
Subjt:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR

Query:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA
        LDGVYPNDVTFIGLLHAIT+RNMVEQGLMVHGLCIKADFV+EL VGNSLITMYAKFE MQDASRVF+ELPYREIISWNALISGYAQN LCQEALE FL A
Subjt:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA

Query:  IMEYKPNE
        IME KPNE
Subjt:  IMEYKPNE

SwissProt top hitse value%identityAlignment
P93005 Pentatricopeptide repeat-containing protein At2g336801.7e-5139.05Show/hide
Query:  GWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNL
        G Q+H + +K G  G V + NALVTMYS+ E L +A K+FD    R+ ++WSAM+TGY+Q G++ L+A+ +F +M   G+K     I G L+ C     L
Subjt:  GWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNL

Query:  ELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLY-----EEGAVSLFNKMRLDGVYPNDVTFIGLLHAITIRNM
        E GKQ+H   +K G E H      L+  Y+K   + DA+  F+ + +R+V  WT++IS Y      E A+ L+ +M+  G+ PND T   +L A +    
Subjt:  ELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLY-----EEGAVSLFNKMRLDGVYPNDVTFIGLLHAITIRNM

Query:  VEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAF
        +E G  VHG  IK  F  E+ +G++L TMY+K   ++D + VF   P ++++SWNA+ISG + N    EALE F
Subjt:  VEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAF

Q0WNP3 Pentatricopeptide repeat-containing protein At4g18520, chloroplastic2.5e-4736.33Show/hide
Query:  TYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFD
        T  + L  C + +   FG Q+H+L +K   K DVFVG +L+ MY++   + D RKVFD M +R+ V+W+++I  +A+EG  G +AI +F  M R  +  +
Subjt:  TYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFD

Query:  NVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMIS-----LYEEGAVSLFNKMRLDGVYP
        N+ +   L  CG    L LGK++H   +K   E +  +G+ L+  Y KC    DA  V + +  R+V+SWT MIS      +E  A+    +M  +GV P
Subjt:  NVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMIS-----LYEEGAVSLFNKMRLDGVYP

Query:  NDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALE
        N  T+   L A      +  G  +H +  K   +S + VG++LI MYAK  F+ +A RVF  +P + ++SW A+I GYA+N  C+EAL+
Subjt:  NDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALE

Q3E6Q1 Pentatricopeptide repeat-containing protein At1g11290, chloroplastic1.9e-4735.17Show/hide
Query:  YTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDN
        +T  L  C D  E   G ++H L +K GF  D+F    L  MY++   + +ARKVFD MP RD VSW+ ++ GY+Q G     A+ +   M  E +K   
Subjt:  YTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDN

Query:  VPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEG-----AVSLFNKMRLDGVYPN
        + I   L      R + +GK+IH  A+++G ++  ++   L+  Y+KC  +E A+ +F+ + +RNV+SW +MI  Y +      A+ +F KM  +GV P 
Subjt:  VPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEG-----AVSLFNKMRLDGVYPN

Query:  DVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAF
        DV+ +G LHA      +E+G  +H L ++      ++V NSLI+MY K + +  A+ +F +L  R ++SWNA+I G+AQN    +AL  F
Subjt:  DVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAF

Q84MA3 Pentatricopeptide repeat-containing protein At4g32430, mitochondrial6.8e-9351.3Show/hide
Query:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF
        M   GV FD+ TY+TALSFC+  E FL G QL +  +K G + D+ VGN+ +TMYSR      AR+VFDEM  +D +SW+++++G +QEG  G +A+++F
Subjt:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF

Query:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
          M+REGV+ D+V  T  ++ C HE +L+L +QIH L +K G+E+   VGN+L+S YSKC ++E  K+VF  +++RNV+SWTTMIS  ++ AVS+F  MR
Subjt:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR

Query:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA
         DGVYPN+VTF+GL++A+     +++GL +HGLCIK  FVSE +VGNS IT+YAKFE ++DA + F ++ +REIISWNA+ISG+AQN    EAL+ FL A
Subjt:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA

Query:  IMEYKPNE
          E  PNE
Subjt:  IMEYKPNE

Q9SN39 Pentatricopeptide repeat-containing protein DOT4, chloroplastic6.0e-4936.59Show/hide
Query:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEG--DNGLQAIL
        M  +GV+ DS T++              G QLH   LK GF     VGN+LV  Y + + +  ARKVFDEM  RD +SW+++I GY   G  + GL    
Subjt:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEG--DNGLQAIL

Query:  VFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLY-EEG----AV
        VFVQM+  G++ D   I    + C   R + LG+ +H + VK          N L+  YSKC  ++ AKAVF  ++DR+V+S+T+MI+ Y  EG    AV
Subjt:  VFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLY-EEG----AV

Query:  SLFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEA
         LF +M  +G+ P+  T   +L+      ++++G  VH    + D   ++ V N+L+ MYAK   MQ+A  VF E+  ++IISWN +I GY++N    EA
Subjt:  SLFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEA

Query:  LEAFLYAIME--YKPNE
        L  F   + E  + P+E
Subjt:  LEAFLYAIME--YKPNE

Arabidopsis top hitse value%identityAlignment
AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein1.4e-4835.17Show/hide
Query:  YTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDN
        +T  L  C D  E   G ++H L +K GF  D+F    L  MY++   + +ARKVFD MP RD VSW+ ++ GY+Q G     A+ +   M  E +K   
Subjt:  YTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDN

Query:  VPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEG-----AVSLFNKMRLDGVYPN
        + I   L      R + +GK+IH  A+++G ++  ++   L+  Y+KC  +E A+ +F+ + +RNV+SW +MI  Y +      A+ +F KM  +GV P 
Subjt:  VPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEG-----AVSLFNKMRLDGVYPN

Query:  DVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAF
        DV+ +G LHA      +E+G  +H L ++      ++V NSLI+MY K + +  A+ +F +L  R ++SWNA+I G+AQN    +AL  F
Subjt:  DVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAF

AT2G33680.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.2e-5239.05Show/hide
Query:  GWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNL
        G Q+H + +K G  G V + NALVTMYS+ E L +A K+FD    R+ ++WSAM+TGY+Q G++ L+A+ +F +M   G+K     I G L+ C     L
Subjt:  GWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNL

Query:  ELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLY-----EEGAVSLFNKMRLDGVYPNDVTFIGLLHAITIRNM
        E GKQ+H   +K G E H      L+  Y+K   + DA+  F+ + +R+V  WT++IS Y      E A+ L+ +M+  G+ PND T   +L A +    
Subjt:  ELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLY-----EEGAVSLFNKMRLDGVYPNDVTFIGLLHAITIRNM

Query:  VEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAF
        +E G  VHG  IK  F  E+ +G++L TMY+K   ++D + VF   P ++++SWNA+ISG + N    EALE F
Subjt:  VEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAF

AT4G18520.1 Pentatricopeptide repeat (PPR) superfamily protein1.8e-4836.33Show/hide
Query:  TYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFD
        T  + L  C + +   FG Q+H+L +K   K DVFVG +L+ MY++   + D RKVFD M +R+ V+W+++I  +A+EG  G +AI +F  M R  +  +
Subjt:  TYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFD

Query:  NVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMIS-----LYEEGAVSLFNKMRLDGVYP
        N+ +   L  CG    L LGK++H   +K   E +  +G+ L+  Y KC    DA  V + +  R+V+SWT MIS      +E  A+    +M  +GV P
Subjt:  NVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMIS-----LYEEGAVSLFNKMRLDGVYP

Query:  NDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALE
        N  T+   L A      +  G  +H +  K   +S + VG++LI MYAK  F+ +A RVF  +P + ++SW A+I GYA+N  C+EAL+
Subjt:  NDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALE

AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein4.3e-5036.59Show/hide
Query:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEG--DNGLQAIL
        M  +GV+ DS T++              G QLH   LK GF     VGN+LV  Y + + +  ARKVFDEM  RD +SW+++I GY   G  + GL    
Subjt:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEG--DNGLQAIL

Query:  VFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLY-EEG----AV
        VFVQM+  G++ D   I    + C   R + LG+ +H + VK          N L+  YSKC  ++ AKAVF  ++DR+V+S+T+MI+ Y  EG    AV
Subjt:  VFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLY-EEG----AV

Query:  SLFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEA
         LF +M  +G+ P+  T   +L+      ++++G  VH    + D   ++ V N+L+ MYAK   MQ+A  VF E+  ++IISWN +I GY++N    EA
Subjt:  SLFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEA

Query:  LEAFLYAIME--YKPNE
        L  F   + E  + P+E
Subjt:  LEAFLYAIME--YKPNE

AT4G32430.1 Pentatricopeptide repeat (PPR) superfamily protein4.8e-9451.3Show/hide
Query:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF
        M   GV FD+ TY+TALSFC+  E FL G QL +  +K G + D+ VGN+ +TMYSR      AR+VFDEM  +D +SW+++++G +QEG  G +A+++F
Subjt:  MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVF

Query:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR
          M+REGV+ D+V  T  ++ C HE +L+L +QIH L +K G+E+   VGN+L+S YSKC ++E  K+VF  +++RNV+SWTTMIS  ++ AVS+F  MR
Subjt:  VQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMR

Query:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA
         DGVYPN+VTF+GL++A+     +++GL +HGLCIK  FVSE +VGNS IT+YAKFE ++DA + F ++ +REIISWNA+ISG+AQN    EAL+ FL A
Subjt:  LDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA

Query:  IMEYKPNE
          E  PNE
Subjt:  IMEYKPNE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTAAATGGGGTTAAGTTTGATTCTGTGACTTATACTACCGCACTTTCCTTTTGCTTAGATGGAGAAGAATTTCTTTTTGGTTGGCAGTTGCATACTCTTGCCCT
GAAATGTGGATTCAAAGGTGATGTTTTTGTTGGAAATGCTCTGGTTACAATGTATTCGAGATGGGAACATCTTGTAGATGCTAGAAAAGTGTTTGATGAAATGCCGAGCC
GAGATCGAGTGTCCTGGAGTGCGATGATTACTGGTTATGCACAAGAGGGAGATAATGGGTTACAAGCCATTTTGGTGTTCGTTCAAATGGTGAGAGAAGGAGTGAAGTTT
GACAATGTACCAATTACTGGAGCACTTTCTGTCTGTGGTCATGAAAGAAACCTCGAGCTTGGAAAACAGATCCATTGTTTAGCTGTGAAAACAGGACATGAGACTCATAC
TTCTGTCGGTAATGTTTTGATCTCGACATACTCCAAGTGTGAGATCATTGAAGATGCAAAGGCAGTGTTCGAGTTAATCAATGACCGCAATGTGATTTCATGGACGACTA
TGATATCGTTGTATGAAGAAGGTGCAGTTTCTTTGTTCAATAAGATGAGATTAGATGGAGTGTATCCGAATGACGTTACATTTATTGGATTACTTCATGCCATTACAATA
AGGAATATGGTGGAACAAGGACTAATGGTTCATGGATTGTGTATCAAAGCTGACTTTGTATCAGAATTAACTGTTGGCAATAGTTTAATCACCATGTATGCTAAATTTGA
GTTTATGCAAGATGCGTCGAGAGTGTTCATCGAACTTCCATACAGAGAGATAATATCATGGAATGCCTTAATTTCTGGGTATGCTCAAAATGCGTTATGCCAAGAAGCTT
TAGAGGCATTTCTTTATGCAATAATGGAATATAAGCCAAACGAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTAAATGGGGTTAAGTTTGATTCTGTGACTTATACTACCGCACTTTCCTTTTGCTTAGATGGAGAAGAATTTCTTTTTGGTTGGCAGTTGCATACTCTTGCCCT
GAAATGTGGATTCAAAGGTGATGTTTTTGTTGGAAATGCTCTGGTTACAATGTATTCGAGATGGGAACATCTTGTAGATGCTAGAAAAGTGTTTGATGAAATGCCGAGCC
GAGATCGAGTGTCCTGGAGTGCGATGATTACTGGTTATGCACAAGAGGGAGATAATGGGTTACAAGCCATTTTGGTGTTCGTTCAAATGGTGAGAGAAGGAGTGAAGTTT
GACAATGTACCAATTACTGGAGCACTTTCTGTCTGTGGTCATGAAAGAAACCTCGAGCTTGGAAAACAGATCCATTGTTTAGCTGTGAAAACAGGACATGAGACTCATAC
TTCTGTCGGTAATGTTTTGATCTCGACATACTCCAAGTGTGAGATCATTGAAGATGCAAAGGCAGTGTTCGAGTTAATCAATGACCGCAATGTGATTTCATGGACGACTA
TGATATCGTTGTATGAAGAAGGTGCAGTTTCTTTGTTCAATAAGATGAGATTAGATGGAGTGTATCCGAATGACGTTACATTTATTGGATTACTTCATGCCATTACAATA
AGGAATATGGTGGAACAAGGACTAATGGTTCATGGATTGTGTATCAAAGCTGACTTTGTATCAGAATTAACTGTTGGCAATAGTTTAATCACCATGTATGCTAAATTTGA
GTTTATGCAAGATGCGTCGAGAGTGTTCATCGAACTTCCATACAGAGAGATAATATCATGGAATGCCTTAATTTCTGGGTATGCTCAAAATGCGTTATGCCAAGAAGCTT
TAGAGGCATTTCTTTATGCAATAATGGAATATAAGCCAAACGAA
Protein sequenceShow/hide protein sequence
MNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKF
DNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMRLDGVYPNDVTFIGLLHAITI
RNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYAIMEYKPNE