; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G19364 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G19364
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRibosome biogenesis protein BRX1-like
Genome locationctg384:51068..53655
RNA-Seq ExpressionCucsat.G19364
SyntenyCucsat.G19364
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR007109 - Brix domain
IPR026532 - Ribosome biogenesis protein BRX1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450669.1 PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo]3.03e-8690.85Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        MAKKRKHSE++PTVSVKKD++A ERPKRTLMGWKDK+VTK+SE GSDHAVFRNKEKVL+TCSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI
        ELVELKGCSSSLFFECRKHKDLYL MAKCPSGPSVKFLVNA+
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI

XP_011659901.2 ribosome biogenesis protein BRX1 homolog 1 [Cucumis sativus]3.25e-9397.87Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVL+TCSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNA
        ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNA
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNA

XP_022159792.1 ribosome biogenesis protein BRX1 homolog 1-like [Momordica charantia]1.26e-8590.85Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        MAKKRKHSE+L +V+VKKD DAPERPKRTLMGWKDK+V KESE GSDHAVFRNKEKVL+TCSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI
        ELVELKGCSSSLFFECRKHKDLYL MAKCPSGPSVKFLVNA+
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI

XP_031736511.1 ribosome biogenesis protein BRX1 homolog 1-like isoform X1 [Cucumis sativus]6.20e-10499.32Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRS+KGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAICFLYC
        ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAICFLYC
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAICFLYC

XP_031744340.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucumis sativus]2.16e-104100Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAICFLYC
        ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAICFLYC
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAICFLYC

TrEMBL top hitse value%identityAlignment
A0A1S3BQS3 ribosome biogenesis protein BRX1-like1.46e-8690.85Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        MAKKRKHSE++PTVSVKKD++A ERPKRTLMGWKDK+VTK+SE GSDHAVFRNKEKVL+TCSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI
        ELVELKGCSSSLFFECRKHKDLYL MAKCPSGPSVKFLVNA+
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI

A0A5D3CG95 Ribosome biogenesis protein BRX1-like1.46e-8690.85Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        MAKKRKHSE++PTVSVKKD++A ERPKRTLMGWKDK+VTK+SE GSDHAVFRNKEKVL+TCSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI
        ELVELKGCSSSLFFECRKHKDLYL MAKCPSGPSVKFLVNA+
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI

A0A6J1E0T2 ribosome biogenesis protein BRX1 homolog 1-like6.11e-8690.85Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        MAKKRKHSE+L +V+VKKD DAPERPKRTLMGWKDK+V KESE GSDHAVFRNKEKVL+TCSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI
        ELVELKGCSSSLFFECRKHKDLYL MAKCPSGPSVKFLVNA+
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI

A0A6J1EW75 ribosome biogenesis protein BRX1 homolog 1-like6.40e-8387.32Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        M KKRKHSE+LP VSVKKD+ APERPKRTL GWKDK+V KE+E GSDHAVFRNKEKVL+TCSRRINFRY HLMLN+VSLLPHCKKDNKVE RSSKGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI
        ELVELKGCSS LFFECRKHKDLYL M+KCPSGPSVKFLVNA+
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI

A0A6J1HZ18 ribosome biogenesis protein BRX1 homolog 1-like2.43e-8288.03Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        M KKRKHSE+LP VSVKKDD APER KRTL GWKDK+VT +SE  SDHAVFRNKEKVL+TCSRRINFRY HLMLNMVSLLPHCKKDNKVE RS+KGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI
        ELVELKGCSSSLFFECRKHKDLYL MAKCPSGPSVKFLVNA+
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI

SwissProt top hitse value%identityAlignment
P34524 Ribosome biogenesis protein BRX1 homolog5.5e-1640.19Show/hide
Query:  KKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSV
        K+ T+E+   ++  ++ N+E+VL+ CSR  + R  +LM ++  LLPH K D+K++ + S    LNE+ E+K C+  ++FE RK KD YL M+    GPS+
Subjt:  KKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSV

Query:  KFLVNAI
        KFLV+ +
Subjt:  KFLVNAI

Q08235 Ribosome biogenesis protein BRX11.1e-1643.82Show/hide
Query:  FRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLV
        F NK++ L+  SR +N+R+ HL+ ++  LLPH +K+ K++ +      LNE+ EL  C++ LFFE RKH+DLYL ++K P+GP++KF +
Subjt:  FRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLV

Q9C928 Ribosome biogenesis protein BRX1 homolog 26.0e-4766.67Show/hide
Query:  MAKKRKHSESLPTVSVKKDDD-APERPKRTLMGWKDKKVTK-ESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGAT
        M +KRKHSE+     VKK D+ AP+RPKRTL+GWKDK   + E       + F+NKEKVL+TCSRRI+FRY  LMLN+VSLLPHCKKD+KVE +SSKGAT
Subjt:  MAKKRKHSESLPTVSVKKDDD-APERPKRTLMGWKDKKVTK-ESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGAT

Query:  LNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI
        LNEL+ELK  +S LFFECRKHKDLY+ M K P+GPSVKFLV A+
Subjt:  LNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI

Q9HGL6 Ribosome biogenesis protein brx11.6e-1546.51Show/hide
Query:  KEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLV
        K+KVL+  SR + +R  HL+ ++VS++PH KKD+K++ +  +   LNEL EL  C++  FFE R+ +DLYL +A+ P+GP+VKF V
Subjt:  KEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLV

Q9LE16 Ribosome biogenesis protein BRX1 homolog 15.6e-5372.54Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        M +KRKHSE++    VK  D APERP+RTL+GWKDKK   E+   +  +VFRNKEKVL+TCSRRINFRY HLMLNMVSLLPHCKKD+KVE +SS+GATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI
        EL+ELKG SS LFFECRKHKDLY+ M K P GPSVKFLVNA+
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI

Arabidopsis top hitse value%identityAlignment
AT1G52930.1 Ribosomal RNA processing Brix domain protein4.3e-4866.67Show/hide
Query:  MAKKRKHSESLPTVSVKKDDD-APERPKRTLMGWKDKKVTK-ESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGAT
        M +KRKHSE+     VKK D+ AP+RPKRTL+GWKDK   + E       + F+NKEKVL+TCSRRI+FRY  LMLN+VSLLPHCKKD+KVE +SSKGAT
Subjt:  MAKKRKHSESLPTVSVKKDDD-APERPKRTLMGWKDKKVTK-ESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGAT

Query:  LNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI
        LNEL+ELK  +S LFFECRKHKDLY+ M K P+GPSVKFLV A+
Subjt:  LNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI

AT3G15460.1 Ribosomal RNA processing Brix domain protein4.0e-5472.54Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        M +KRKHSE++    VK  D APERP+RTL+GWKDKK   E+   +  +VFRNKEKVL+TCSRRINFRY HLMLNMVSLLPHCKKD+KVE +SS+GATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI
        EL+ELKG SS LFFECRKHKDLY+ M K P GPSVKFLVNA+
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGPSVKFLVNAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGAAGAGGAAGCATAGTGAGTCTTTGCCGACGGTATCAGTTAAGAAGGATGATGATGCTCCGGAGAGACCTAAGCGGACACTCATGGGCTGGAAAGACAAAAA
AGTGACAAAAGAGAGTGAAGTTGGTTCTGATCATGCTGTTTTTCGAAATAAAGAAAAGGTTCTCATCACGTGTTCCCGTCGAATCAATTTTAGGTATTGGCATTTGATGT
TGAATATGGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTTGAGGTCCAGCAAGGGTGCAACACTGAATGAGCTGGTTGAGCTCAAAGGTTGTTCTTCC
AGCCTATTTTTCGAGTGCAGAAAACATAAAGATCTTTATCTATGTATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTTTAGTTAATGCCATTTGTTTTCTCTATTG
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGAAGAGGAAGCATAGTGAGTCTTTGCCGACGGTATCAGTTAAGAAGGATGATGATGCTCCGGAGAGACCTAAGCGGACACTCATGGGCTGGAAAGACAAAAA
AGTGACAAAAGAGAGTGAAGTTGGTTCTGATCATGCTGTTTTTCGAAATAAAGAAAAGGTTCTCATCACGTGTTCCCGTCGAATCAATTTTAGGTATTGGCATTTGATGT
TGAATATGGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTTGAGGTCCAGCAAGGGTGCAACACTGAATGAGCTGGTTGAGCTCAAAGGTTGTTCTTCC
AGCCTATTTTTCGAGTGCAGAAAACATAAAGATCTTTATCTATGTATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTTTAGTTAATGCCATTTGTTTTCTCTATTG
TTGA
Protein sequenceShow/hide protein sequence
MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFRNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSS
SLFFECRKHKDLYLCMAKCPSGPSVKFLVNAICFLYC