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Cucsat.G19436 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G19436
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRING-box protein 1a
Genome locationctg4:110362..113382
RNA-Seq ExpressionCucsat.G19436
SyntenyCucsat.G19436
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031461 - cullin-RING ubiquitin ligase complex (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
GO:0097602 - cullin family protein binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR024766 - Zinc finger, RING-H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141073.1 RING-box protein 1a [Cucumis sativus]2.72e-73100Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

XP_004144035.1 RING-box protein 1a [Cucumis sativus]9.08e-7298.1Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLD+DVPMVPA EASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

XP_008459863.1 PREDICTED: RING-box protein 1a-like isoform X1 [Cucumis melo]1.29e-7198.1Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDVPMV AVEASSSAGPSS+KKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

XP_022933228.1 RING-box protein 1a [Cucurbita moschata]3.17e-7299.05Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDVPMVPA EASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

XP_038889977.1 RING-box protein 1a-like isoform X1 [Benincasa hispida]2.60e-7197.14Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDVPMVPA +ASSSAGPSS+KKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

TrEMBL top hitse value%identityAlignment
A0A0A0LFP5 RING-type domain-containing protein1.32e-73100Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

A0A0A0LWN9 RING-type domain-containing protein4.40e-7298.1Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLD+DVPMVPA EASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

A0A5D3CFD3 RING-box protein 1a4.40e-7298.1Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLD+DVPMVPA EASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

A0A6J1F460 RING-box protein 1a1.53e-7299.05Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDVPMVPA EASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

A0A6J1I027 RING-box protein 1a1.53e-7299.05Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDSDVPMVPA EASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

SwissProt top hitse value%identityAlignment
P62877 E3 ubiquitin-protein ligase RBX13.4e-4581.82Show/hide
Query:  MVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLGMR
        M  A++  + +G +S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL  R
Subjt:  MVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLGMR

P62878 E3 ubiquitin-protein ligase RBX13.4e-4581.82Show/hide
Query:  MVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLGMR
        M  A++  + +G +S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL  R
Subjt:  MVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLGMR

Q8QG64 RING-box protein 11.0e-4480.81Show/hide
Query:  MVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLGMR
        M  A++  + +  +S    KRFE+KKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPL  R
Subjt:  MVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLGMR

Q940X7 RING-box protein 1a1.4e-5191.51Show/hide
Query:  MATLDSDVPMVPAVEASSS-AGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
        MATLDSDV M+PA EASSS A  SS+KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
Subjt:  MATLDSDVPMVPAVEASSS-AGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT

Query:  RQVCPL
        RQVCPL
Subjt:  RQVCPL

Q9M2B0 RING-box protein 1b3.4e-4582.86Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MA+L+SDV M     +S S   SSSK  KRFE+KKW+AVALWAWDIVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

Arabidopsis top hitse value%identityAlignment
AT3G05870.1 anaphase-promoting complex/cyclosome 112.7e-1340Show/hide
Query:  KPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWL--KTRQV-CPLGMR
        K K   I  W+AVA W WD   + C ICR      C +C+        ++C + WG CNHAFH HCI +W+  +T Q  CP+  R
Subjt:  KPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWL--KTRQV-CPLGMR

AT3G42830.1 RING/U-box superfamily protein2.5e-4682.86Show/hide
Query:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MA+L+SDV M     +S S   SSSK  KRFE+KKW+AVALWAWDIVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPL
        QVCPL
Subjt:  QVCPL

AT5G20570.1 RING-box 11.0e-5291.51Show/hide
Query:  MATLDSDVPMVPAVEASSS-AGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
        MATLDSDV M+PA EASSS A  SS+KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
Subjt:  MATLDSDVPMVPAVEASSS-AGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT

Query:  RQVCPL
        RQVCPL
Subjt:  RQVCPL

AT5G20570.2 RING-box 11.2e-4874.62Show/hide
Query:  MATLDSDVPMVPAVEASSS-AGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW------------------
        MATLDSDV M+PA EASSS A  SS+KK KRFEIKKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW                  
Subjt:  MATLDSDVPMVPAVEASSS-AGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW------------------

Query:  ------GVCNHAFHFHCISRWLKTRQVCPL
              GVCNHAFHFHCISRWLKTRQVCPL
Subjt:  ------GVCNHAFHFHCISRWLKTRQVCPL

AT5G20570.3 RING-box 11.5e-4877.42Show/hide
Query:  MATLDSDVPMVPAVEASSS-AGPSSSKKPKRFEIKKWNAVALWAWD------------------IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
        MATLDSDV M+PA EASSS A  SS+KK KRFEIKKW+AVALWAW                   IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
Subjt:  MATLDSDVPMVPAVEASSS-AGPSSSKKPKRFEIKKWNAVALWAWD------------------IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW

Query:  GVCNHAFHFHCISRWLKTRQVCPL
        GVCNHAFHFHCISRWLKTRQVCPL
Subjt:  GVCNHAFHFHCISRWLKTRQVCPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCTTGGACTCCGACGTTCCAATGGTTCCAGCCGTCGAGGCTTCGAGCAGTGCCGGTCCTTCATCTTCCAAGAAACCCAAGCGTTTTGAGATCAAAAAATGGAA
CGCCGTCGCTCTTTGGGCATGGGATATCGTTGTCGATAACTGTGCGATCTGTAGGAACCATATCATGGATCTTTGTATTGAGTGTCAAGCTAACCAGGCCAGCGCAACCA
GCGAGGAATGTACCGTAGCTTGGGGGGTGTGTAATCATGCATTTCATTTCCACTGTATCAGTAGATGGTTGAAGACACGTCAAGTTTGCCCATTGGGTATGCGTTTCAAG
TTCTTCCCCTACCCTTTTCTCATATCTTTATATGAACTTCAAAATTTAAAGGGAGCTTTGCCATTTTTACAGATAATAGCGAATGGGAATTTCAGAAGTATGGTCACTAG
AACTTTCGTGCTGTTGAGGATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCTTGGACTCCGACGTTCCAATGGTTCCAGCCGTCGAGGCTTCGAGCAGTGCCGGTCCTTCATCTTCCAAGAAACCCAAGCGTTTTGAGATCAAAAAATGGAA
CGCCGTCGCTCTTTGGGCATGGGATATCGTTGTCGATAACTGTGCGATCTGTAGGAACCATATCATGGATCTTTGTATTGAGTGTCAAGCTAACCAGGCCAGCGCAACCA
GCGAGGAATGTACCGTAGCTTGGGGGGTGTGTAATCATGCATTTCATTTCCACTGTATCAGTAGATGGTTGAAGACACGTCAAGTTTGCCCATTGGGTATGCGTTTCAAG
TTCTTCCCCTACCCTTTTCTCATATCTTTATATGAACTTCAAAATTTAAAGGGAGCTTTGCCATTTTTACAGATAATAGCGAATGGGAATTTCAGAAGTATGGTCACTAG
AACTTTCGTGCTGTTGAGGATATGA
Protein sequenceShow/hide protein sequence
MATLDSDVPMVPAVEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLGMRFK
FFPYPFLISLYELQNLKGALPFLQIIANGNFRSMVTRTFVLLRI