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Cucsat.G1950 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G1950
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionUnknown protein
Genome locationctg1002:4592454..4597708
RNA-Seq ExpressionCucsat.G1950
SyntenyCucsat.G1950
Gene Ontology termsGO:0009536 - plastid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134802.1 uncharacterized protein LOC101208124 [Cucumis sativus]7.56e-7899.17Show/hide
Query:  MATSFITPFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPE
        MATSF+TPFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPE
Subjt:  MATSFITPFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPE

Query:  GPLVEEFWDNVRRYALYALT
        GPLVEEFWDNVRRYALYALT
Subjt:  GPLVEEFWDNVRRYALYALT
XP_008440084.1 PREDICTED: uncharacterized protein LOC103484667 [Cucumis melo]1.32e-7192.5Show/hide
Query:  MATSFITPFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPE
        MATSFITPFFPTF+T LI LPSFP+KPI PIRTPFRPLASSA PQSPAKPLKIPHP+DFKTIEATPSGKSRFLIIGAVSVGVALFLIGCD ERALALGPE
Subjt:  MATSFITPFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPE

Query:  GPLVEEFWDNVRRYALYALT
        GPLVEEFWDNVRRYA+YALT
Subjt:  GPLVEEFWDNVRRYALYALT
XP_023543366.1 uncharacterized protein LOC111803269 [Cucurbita pepo subsp. pepo]4.42e-5776Show/hide
Query:  MATSFIT-----PFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERAL
        MATSF +     P  PTFK P +S P FPIK  SP+R PFRPLA+SAPPQSPAKPLK PHP DFK I+ TP G SRFLIIGAVSVGVALFL+GCDG+RAL
Subjt:  MATSFIT-----PFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERAL

Query:  ALGPEGPLVEEFWDNVRRYALYALT
        ALGPEGPLVEEFWDNVRRYA+YA+T
Subjt:  ALGPEGPLVEEFWDNVRRYALYALT
XP_038880862.1 uncharacterized protein LOC120072546 isoform X1 [Benincasa hispida]4.85e-7090.83Show/hide
Query:  MATSFITPFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPE
        MATSF TPFFPTFK PLIS P FPI  ISP+RTPFRPLASSAPPQS AKPLKIPHP+DF+TIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPE
Subjt:  MATSFITPFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPE

Query:  GPLVEEFWDNVRRYALYALT
        GPLVEEFWDNVRRYA+YALT
Subjt:  GPLVEEFWDNVRRYALYALT
XP_038880863.1 uncharacterized protein LOC120072546 isoform X2 [Benincasa hispida]4.79e-7190.16Show/hide
Query:  MATSFITPFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPE
        MATSF TPFFPTFK PLIS P FPI  ISP+RTPFRPLASSAPPQS AKPLKIPHP+DF+TIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPE
Subjt:  MATSFITPFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPE

Query:  GPLVEEFWDNVRRYALYALTRP
        GPLVEEFWDNVRRYA+YALT P
Subjt:  GPLVEEFWDNVRRYALYALTRP
TrEMBL top hitse value%identityAlignment
A0A0A0KHP7 Uncharacterized protein ycf333.66e-7899.17Show/hide
Query:  MATSFITPFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPE
        MATSF+TPFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPE
Subjt:  MATSFITPFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPE

Query:  GPLVEEFWDNVRRYALYALT
        GPLVEEFWDNVRRYALYALT
Subjt:  GPLVEEFWDNVRRYALYALT
A0A1S3B114 Uncharacterized protein ycf336.41e-7292.5Show/hide
Query:  MATSFITPFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPE
        MATSFITPFFPTF+T LI LPSFP+KPI PIRTPFRPLASSA PQSPAKPLKIPHP+DFKTIEATPSGKSRFLIIGAVSVGVALFLIGCD ERALALGPE
Subjt:  MATSFITPFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPE

Query:  GPLVEEFWDNVRRYALYALT
        GPLVEEFWDNVRRYA+YALT
Subjt:  GPLVEEFWDNVRRYALYALT
A0A5D3CNG7 Uncharacterized protein ycf336.41e-7292.5Show/hide
Query:  MATSFITPFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPE
        MATSFITPFFPTF+T LI LPSFP+KPI PIRTPFRPLASSA PQSPAKPLKIPHP+DFKTIEATPSGKSRFLIIGAVSVGVALFLIGCD ERALALGPE
Subjt:  MATSFITPFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPE

Query:  GPLVEEFWDNVRRYALYALT
        GPLVEEFWDNVRRYA+YALT
Subjt:  GPLVEEFWDNVRRYALYALT
A0A6J1GE79 Uncharacterized protein ycf335.78e-5574.4Show/hide
Query:  MATSFIT-----PFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERAL
        MATSF +     P  PTFK P +S P FPIK  SP+R  FRPLA+SAPPQSPAKPLK P P DFK I+ TP G SRFLIIGAVSVGVALFL+GCDG+RAL
Subjt:  MATSFIT-----PFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERAL

Query:  ALGPEGPLVEEFWDNVRRYALYALT
        ALGPEGPLVEEFWDNVRRYA+YA+T
Subjt:  ALGPEGPLVEEFWDNVRRYALYALT
A0A6J1IVK7 Uncharacterized protein ycf338.21e-5574.4Show/hide
Query:  MATSFIT-----PFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERAL
        MATSF +     P  PTFK+P +S P FPIK  SP+R PFRPLA+SAPPQS AKPLK P P DFK I+ TP G SRFLIIGAVSVGVALFL+GC+GERAL
Subjt:  MATSFIT-----PFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERAL

Query:  ALGPEGPLVEEFWDNVRRYALYALT
        ALGPEGPLVEEFWDNVRRYA+YA+T
Subjt:  ALGPEGPLVEEFWDNVRRYALYALT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G16410.1 unknown protein1.3e-1466.67Show/hide
Query:  RFLIIGAVSVGVALFLI-GCDGERALALGPEGPLVEEFWDNVRRYALYALT
        R+ ++G VSVG+ + L+ G D E+A+ALGPEGPL+EEFWDNVRRY LYALT
Subjt:  RFLIIGAVSVGVALFLI-GCDGERALALGPEGPLVEEFWDNVRRYALYALT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTTCTTTCATAACTCCATTCTTCCCCACTTTCAAAACGCCACTCATTTCTCTTCCTTCATTTCCAATCAAGCCCATTTCCCCTATCCGAACCCCTTTCCGGCC
TCTCGCTTCCTCTGCGCCGCCGCAATCTCCCGCCAAACCCCTAAAAATCCCTCACCCGACGGATTTCAAGACAATCGAAGCAACCCCAAGTGGGAAATCGAGGTTCCTGA
TCATTGGAGCCGTCTCGGTGGGCGTTGCCCTGTTTCTGATCGGTTGCGACGGCGAAAGGGCTTTGGCTTTGGGTCCTGAAGGCCCTTTGGTGGAGGAATTTTGGGACAAT
GTTAGAAGATATGCACTTTACGCCCTTACTAGACCCAGCCATGGATTTAAGAGGGCTGCTTCATTCAGTAAGTTATCTTCTTGGGAACCCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTTCTTTCATAACTCCATTCTTCCCCACTTTCAAAACGCCACTCATTTCTCTTCCTTCATTTCCAATCAAGCCCATTTCCCCTATCCGAACCCCTTTCCGGCC
TCTCGCTTCCTCTGCGCCGCCGCAATCTCCCGCCAAACCCCTAAAAATCCCTCACCCGACGGATTTCAAGACAATCGAAGCAACCCCAAGTGGGAAATCGAGGTTCCTGA
TCATTGGAGCCGTCTCGGTGGGCGTTGCCCTGTTTCTGATCGGTTGCGACGGCGAAAGGGCTTTGGCTTTGGGTCCTGAAGGCCCTTTGGTGGAGGAATTTTGGGACAAT
GTTAGAAGATATGCACTTTACGCCCTTACTAGACCCAGCCATGGATTTAAGAGGGCTGCTTCATTCAGTAAGTTATCTTCTTGGGAACCCAAATGA
Protein sequenceShow/hide protein sequence
MATSFITPFFPTFKTPLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTDFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDN
VRRYALYALTRPSHGFKRAASFSKLSSWEPK