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Cucsat.G19537 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G19537
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionAlba domain-containing protein
Genome locationctg4:1916765..1918507
RNA-Seq ExpressionCucsat.G19537
SyntenyCucsat.G19537
Gene Ontology termsGO:0048235 - pollen sperm cell differentiation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139384.1 uncharacterized protein At2g34160 [Cucumis sativus]8.13e-84100Show/hide
Query:  MAATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIE
        MAATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIE
Subjt:  MAATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIE

Query:  IVLGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ
        IVLGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ
Subjt:  IVLGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ

XP_008456222.1 PREDICTED: uncharacterized protein At2g34160 [Cucumis melo]2.15e-8198.58Show/hide
Query:  ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ
        LGKSEKFDSLMTAATAVPETVVAVAAA EEEKKAEE+KEEQ
Subjt:  LGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ

XP_022946134.1 uncharacterized protein At2g34160-like isoform X1 [Cucurbita moschata]9.43e-7084.08Show/hide
Query:  ATIAVSGATPA---------TETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL
        AT+AVSGAT A         TETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL
Subjt:  ATIAVSGATPA---------TETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL

Query:  VQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVAAA-------AEEEKKAEESKEEQ
        VQKAKIEIVLGKSEKFDSLMTAAT VPE  VA A A       A EEKK EESKEEQ
Subjt:  VQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVAAA-------AEEEKKAEESKEEQ

XP_022999100.1 uncharacterized protein At2g34160 isoform X1 [Cucurbita maxima]4.51e-6981.48Show/hide
Query:  ATIAVSGATPA---------TETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL
        AT+AVSGAT A         TETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL
Subjt:  ATIAVSGATPA---------TETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL

Query:  VQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVAA------------AAEEEKKAEESKEEQ
        VQKAKIEIVLGKSEKFDSLMTAAT VPE  VA  A            AA EEKK EESKEEQ
Subjt:  VQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVAA------------AAEEEKKAEESKEEQ

XP_038877259.1 uncharacterized protein At2g34160-like [Benincasa hispida]7.40e-7393.66Show/hide
Query:  ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        ATIAVSGA  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTAATAVPETVVAVA---AAAEEEKKAEESKE
        LGKSEKFDSLMTAATAVPE V  VA   AAAEEEKKAEE+KE
Subjt:  LGKSEKFDSLMTAATAVPETVVAVA---AAAEEEKKAEESKE

TrEMBL top hitse value%identityAlignment
A0A0A0LG69 Alba domain-containing protein3.93e-84100Show/hide
Query:  MAATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIE
        MAATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIE
Subjt:  MAATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIE

Query:  IVLGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ
        IVLGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ
Subjt:  IVLGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ

A0A1S3C2U1 uncharacterized protein At2g341601.04e-8198.58Show/hide
Query:  ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ
        LGKSEKFDSLMTAATAVPETVVAVAAA EEEKKAEE+KEEQ
Subjt:  LGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ

A0A5D3D4G4 Alba DNA/RNA-binding protein1.04e-8198.58Show/hide
Query:  ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ
        LGKSEKFDSLMTAATAVPETVVAVAAA EEEKKAEE+KEEQ
Subjt:  LGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ

A0A6J1G2Y0 uncharacterized protein At2g34160-like isoform X14.57e-7084.08Show/hide
Query:  ATIAVSGATPA---------TETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL
        AT+AVSGAT A         TETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL
Subjt:  ATIAVSGATPA---------TETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL

Query:  VQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVAAA-------AEEEKKAEESKEEQ
        VQKAKIEIVLGKSEKFDSLMTAAT VPE  VA A A       A EEKK EESKEEQ
Subjt:  VQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVAAA-------AEEEKKAEESKEEQ

A0A6J1KEC8 uncharacterized protein At2g34160 isoform X12.19e-6981.48Show/hide
Query:  ATIAVSGATPA---------TETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL
        AT+AVSGAT A         TETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL
Subjt:  ATIAVSGATPA---------TETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRL

Query:  VQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVAA------------AAEEEKKAEESKEEQ
        VQKAKIEIVLGKSEKFDSLMTAAT VPE  VA  A            AA EEKK EESKEEQ
Subjt:  VQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVAA------------AAEEEKKAEESKEEQ

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341602.0e-3770.49Show/hide
Query:  TIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVL
        T  V+    AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG A EKK++TSTV +KD+ +GR VQKAKIEI L
Subjt:  TIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVL

Query:  GKSEKFDSLMTAATAVPETVVA
         KSEKFD LM AA    E   A
Subjt:  GKSEKFDSLMTAATAVPETVVA

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein8.5e-3965.47Show/hide
Query:  TIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVL
        T  V+    A +TQKKNRIQVSNTKKPLFFYVNLAKRY+QQ+ +VELSALGMAI TVVT+AEILKNNG A EKK++TSTV +KD+++GR VQKAKIEI L
Subjt:  TIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVL

Query:  GKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEE
         KSEKFD LM              AAA EEK+A E++E+
Subjt:  GKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEE

AT2G34160.1 Alba DNA/RNA-binding protein1.5e-3870.49Show/hide
Query:  TIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVL
        T  V+    AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG A EKK++TSTV +KD+ +GR VQKAKIEI L
Subjt:  TIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVL

Query:  GKSEKFDSLMTAATAVPETVVA
         KSEKFD LM AA    E   A
Subjt:  GKSEKFDSLMTAATAVPETVVA

AT3G04620.1 Alba DNA/RNA-binding protein5.2e-4474.64Show/hide
Query:  AVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGK
        A +  T   ET KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI+EILKNNGLATEKKVLTSTVGMKDE KG++VQKAKIEIVLGK
Subjt:  AVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGK

Query:  SEKFDSLMTAAT--AVPETVVAVAAAAEEEKKAEESKE
        S+KFDSL+   T    PE      A+AE E   E  +E
Subjt:  SEKFDSLMTAAT--AVPETVVAVAAAAEEEKKAEESKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTTTCCCGAAGCCCTTCGTTCTCCCCTCCCATTCATTTTTCCCGCTCCTTCCAATTTTCCCCCATAATATTCCTCAACAATCCAATCTCTTCCCTCTCTTTCTTTCTTT
CCATCTGCTTTCCAGATACACACACACACCCAATTTTGTTTTACTCACTGAGAAAGTGGAAAATTTAGCAATGGCCGCGACGATTGCTGTCTCGGGAGCCACACCCGCCA
CTGAAACACAAAAGAAGAACAGAATTCAGGTTTCTAATACCAAGAAGCCCCTCTTCTTCTACGTTAATCTTGCTAAGAGGTATATTCAACAGCATAATGAAGTTGAGCTT
TCTGCCTTGGGAATGGCAATCACTACTGTTGTCACAATTGCGGAGATTCTTAAGAACAATGGGCTGGCTACAGAAAAGAAAGTTTTGACTTCTACAGTCGGCATGAAAGA
TGAGAACAAAGGTCGTTTGGTTCAGAAAGCTAAGATTGAGATTGTTCTGGGGAAGTCTGAGAAGTTTGATTCTCTGATGACTGCGGCCACGGCAGTACCGGAGACAGTGG
TGGCAGTTGCAGCAGCTGCTGAGGAAGAGAAGAAAGCAGAGGAAAGCAAGGAGGAGCAGTAG
mRNA sequenceShow/hide mRNA sequence
AGTTTCCCGAAGCCCTTCGTTCTCCCCTCCCATTCATTTTTCCCGCTCCTTCCAATTTTCCCCCATAATATTCCTCAACAATCCAATCTCTTCCCTCTCTTTCTTTCTTT
CCATCTGCTTTCCAGATACACACACACACCCAATTTTGTTTTACTCACTGAGAAAGTGGAAAATTTAGCAATGGCCGCGACGATTGCTGTCTCGGGAGCCACACCCGCCA
CTGAAACACAAAAGAAGAACAGAATTCAGGTTTCTAATACCAAGAAGCCCCTCTTCTTCTACGTTAATCTTGCTAAGAGGTATATTCAACAGCATAATGAAGTTGAGCTT
TCTGCCTTGGGAATGGCAATCACTACTGTTGTCACAATTGCGGAGATTCTTAAGAACAATGGGCTGGCTACAGAAAAGAAAGTTTTGACTTCTACAGTCGGCATGAAAGA
TGAGAACAAAGGTCGTTTGGTTCAGAAAGCTAAGATTGAGATTGTTCTGGGGAAGTCTGAGAAGTTTGATTCTCTGATGACTGCGGCCACGGCAGTACCGGAGACAGTGG
TGGCAGTTGCAGCAGCTGCTGAGGAAGAGAAGAAAGCAGAGGAAAGCAAGGAGGAGCAGTAG
Protein sequenceShow/hide protein sequence
SFPKPFVLPSHSFFPLLPIFPHNIPQQSNLFPLFLSFHLLSRYTHTPNFVLLTEKVENLAMAATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVEL
SALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVAAAAEEEKKAEESKEEQ