; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G19540 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G19540
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionpathogenesis-related protein PR-4-like
Genome locationctg4:1984264..1985044
RNA-Seq ExpressionCucsat.G19540
SyntenyCucsat.G19540
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139237.1 pathogenesis-related protein PR-4A [Cucumis sativus]1.42e-102100Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV
        MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV

Query:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC
        RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC
Subjt:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC

XP_008456018.1 PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo]5.76e-8482.39Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV
        MEKGSI+MIL+LALGVLSLANAQSATNVRATYHLYNPQ+INWDY++ASV+CATWDANKPLEWRRRY WTAFCGPVGPRG+ SCGRCL+VTN ET AS  V
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV

Query:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC
        RIVDQC+NGGLDLD+  F+ IDTNGNG   GHL VNY+FVNC
Subjt:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC

XP_022999102.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]4.74e-8380.99Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV
        MEKGS +MIL LALG+LSLANAQSA NVRATYHLYNPQ+INWDY++ASV+CATWDANKP+EWRR+Y WTAFCGPVGPRGQASCGRCL+VTN ET AS  V
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV

Query:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC
        RIVDQC+NGGLDLD+  FK IDTNGNG   GHL VNY+FVNC
Subjt:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC

XP_023521169.1 pathogenesis-related protein P2-like [Cucurbita pepo subsp. pepo]9.96e-8581.69Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV
        M+KG  +M+L LALG+LSLANAQSATNVRATYHLYNPQ+INWDY++ASV+CATWDANKPLE+RRRY WTAFCGPVGPRGQASCGRCL+VTN ETKAS  V
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV

Query:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC
        RIVDQCSNGGLDLD+  F+ IDTNGNGY+ GHL VNY+FVNC
Subjt:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC

XP_038890575.1 pathogenesis-related protein PR-4-like [Benincasa hispida]2.55e-8785.21Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV
        MEKGSI+MIL+LALGVLS+ANAQSA NVRATYHLYNPQNINWDY++ASVYCATWDANKPLEWRRRY WTAFCGPVGPRGQASCGRCL+VTN ET AST V
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV

Query:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC
        RIVDQCSNGGLDLD+  FK +DTNGNG   GHL VNY+FVNC
Subjt:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LG76 Barwin domain-containing protein6.89e-103100Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV
        MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV

Query:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC
        RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC
Subjt:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC

A0A1S3C3H6 pathogenesis-related protein PR-4-like2.79e-8482.39Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV
        MEKGSI+MIL+LALGVLSLANAQSATNVRATYHLYNPQ+INWDY++ASV+CATWDANKPLEWRRRY WTAFCGPVGPRG+ SCGRCL+VTN ET AS  V
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV

Query:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC
        RIVDQC+NGGLDLD+  F+ IDTNGNG   GHL VNY+FVNC
Subjt:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC

A0A5D3D4G8 Pathogenesis-related protein PR-4-like2.79e-8482.39Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV
        MEKGSI+MIL+LALGVLSLANAQSATNVRATYHLYNPQ+INWDY++ASV+CATWDANKPLEWRRRY WTAFCGPVGPRG+ SCGRCL+VTN ET AS  V
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV

Query:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC
        RIVDQC+NGGLDLD+  F+ IDTNGNG   GHL VNY+FVNC
Subjt:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC

A0A6J1K9X1 pathogenesis-related protein PR-4-like2.29e-8380.99Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV
        MEKGS +MIL LALG+LSLANAQSA NVRATYHLYNPQ+INWDY++ASV+CATWDANKP+EWRR+Y WTAFCGPVGPRGQASCGRCL+VTN ET AS  V
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV

Query:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC
        RIVDQC+NGGLDLD+  FK IDTNGNG   GHL VNY+FVNC
Subjt:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC

A0A6J1KIN7 pathogenesis-related protein P2-like4.63e-8380.28Show/hide
Query:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV
        M+KG  +M+L LALG+LSL NAQSA NVRATYHLYNPQ+INWDY++ASVYCATWDANKPLE+RRRY WTAFCGPVGPRGQASCGRCL+VTN ETKAS  V
Subjt:  MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTV

Query:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC
        RIVDQCSNGGLDLD+  F+ IDTNGNGY+ GHL V YEFV+C
Subjt:  RIVDQCSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN18.6e-5171.43Show/hide
Query:  SATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQCSNGGLDLDIKPFKAIDT
        SA NVRATYH+YNPQN+ WD    S YC+TWDANKPL WR++Y WTAFCGPVGPRG+ SCG+CL+VTN  T A TTVRIVDQCSNGGLDLD+  F+ IDT
Subjt:  SATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQCSNGGLDLDIKPFKAIDT

Query:  NGNGYKNGHLKVNYEFVNC
        +GNG   GHL VNY+FV+C
Subjt:  NGNGYKNGHLKVNYEFVNC

P09762 Wound-induced protein WIN21.6e-4971.43Show/hide
Query:  SATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQCSNGGLDLDIKPFKAIDT
        SA NVRATYH+YNPQN+ WD    S YC+TWDANKP  WR +Y WTAFCGPVGPRG+ SCG+CL+VTN  T A TTVRIVDQCSNGGLDLDI  F+ IDT
Subjt:  SATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQCSNGGLDLDIKPFKAIDT

Query:  NGNGYKNGHLKVNYEFVNC
        +G G + GHL VNY+FVNC
Subjt:  NGNGYKNGHLKVNYEFVNC

P29062 Pathogenesis-related protein PR-4A4.4e-5570.07Show/hide
Query:  IVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQ
        + + LL+   V+++A AQSATNVR+TYHLYNPQNINWD   AS +CATWDA+KPL WR++Y WTAFCGP GPRGQ SCGRCL+VTN  T   TTVRIVDQ
Subjt:  IVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQ

Query:  CSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC
        CSNGGLDLD+  F  +DTNG GY+ GHL VNYEFVNC
Subjt:  CSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC

P29063 Pathogenesis-related protein PR-4B6.4e-5468.61Show/hide
Query:  IVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQ
        + + LL+   ++++A AQSATNVR+TYHLYNPQNINWD   AS +CATWDA+KPL WR++Y WTAFCGP GPRGQ SCGRCL+VTN  T    TVRIVDQ
Subjt:  IVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQ

Query:  CSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC
        CSNGGLDLD+  F  +DTNG GY+ GHL VNYEFVNC
Subjt:  CSNGGLDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC

P32045 Pathogenesis-related protein P22.0e-5575.59Show/hide
Query:  VLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQCSNGGLDLDI
        ++++A AQSATNVRATYHLYNPQNINWD   ASVYCATWDA+KPLEWRRRY WTAFCGP GP GQASCGRCL+VTN  T    TVRIVDQC NGGLDLD+
Subjt:  VLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQCSNGGLDLDI

Query:  KPFKAIDTNGNGYKNGHLKVNYEFVNC
          F  +DTNG GY+ G+L VNYEFVNC
Subjt:  KPFKAIDTNGNGYKNGHLKVNYEFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 42.4e-4866.67Show/hide
Query:  QSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQCSNGGLDLDIKPFKAID
        +SA+NVRATYH YNP   NWD    S YC+TWDA+KP  WR +Y WTAFCGP GPRGQASCG+CL+V N  T A+ TVRIVDQCSNGGLDLD+  F  ID
Subjt:  QSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQCSNGGLDLDIKPFKAID

Query:  TNGNGYKNGHLKVNYEFVNC
        T+G GY+ GHL V+Y+FV+C
Subjt:  TNGNGYKNGHLKVNYEFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAGGAAGTATTGTGATGATATTGTTGTTGGCTTTGGGGGTTTTGAGCTTGGCAAATGCTCAAAGTGCCACAAATGTAAGAGCTACTTATCATTTGTATAACCC
ACAAAACATCAATTGGGACTACATGAAGGCAAGTGTTTATTGTGCAACATGGGATGCTAACAAGCCTTTGGAGTGGCGTCGTCGGTACGATTGGACTGCTTTCTGTGGCC
CAGTTGGCCCTCGTGGCCAAGCTTCTTGTGGACGTTGTTTGAAGGTAACTAACGTTGAAACGAAAGCTTCAACAACAGTGAGAATTGTTGATCAATGCTCCAACGGAGGG
TTAGATTTGGATATAAAACCATTTAAAGCGATTGATACGAATGGAAATGGATACAAGAATGGCCATCTCAAGGTCAACTATGAGTTTGTCAATTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAGGAAGTATTGTGATGATATTGTTGTTGGCTTTGGGGGTTTTGAGCTTGGCAAATGCTCAAAGTGCCACAAATGTAAGAGCTACTTATCATTTGTATAACCC
ACAAAACATCAATTGGGACTACATGAAGGCAAGTGTTTATTGTGCAACATGGGATGCTAACAAGCCTTTGGAGTGGCGTCGTCGGTACGATTGGACTGCTTTCTGTGGCC
CAGTTGGCCCTCGTGGCCAAGCTTCTTGTGGACGTTGTTTGAAGGTAACTAACGTTGAAACGAAAGCTTCAACAACAGTGAGAATTGTTGATCAATGCTCCAACGGAGGG
TTAGATTTGGATATAAAACCATTTAAAGCGATTGATACGAATGGAAATGGATACAAGAATGGCCATCTCAAGGTCAACTATGAGTTTGTCAATTGCTAA
Protein sequenceShow/hide protein sequence
MEKGSIVMILLLALGVLSLANAQSATNVRATYHLYNPQNINWDYMKASVYCATWDANKPLEWRRRYDWTAFCGPVGPRGQASCGRCLKVTNVETKASTTVRIVDQCSNGG
LDLDIKPFKAIDTNGNGYKNGHLKVNYEFVNC