; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G19541 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G19541
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionpathogenesis-related protein PR-4-like
Genome locationctg4:1986639..1987404
RNA-Seq ExpressionCucsat.G19541
SyntenyCucsat.G19541
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599312.1 hypothetical protein SDJN03_09090, partial [Cucurbita argyrosperma subsp. sororia]1.12e-9090.14Show/hide
Query:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        M K S +MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTETG+SEIV
Subjt:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG  RGHLIVNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC

XP_004139239.1 pathogenesis-related protein PR-4 [Cucumis sativus]1.66e-101100Show/hide
Query:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
Subjt:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC

XP_008456018.1 PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo]1.54e-9796.48Show/hide
Query:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        M KGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDA+KPLEWRR+YGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
Subjt:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGN RGHL VNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC

XP_022946136.1 pathogenesis-related protein PR-4-like [Cucurbita moschata]9.63e-9291.55Show/hide
Query:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        M K SI+MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG  RGHLIVNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC

XP_022999102.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]2.36e-9290.85Show/hide
Query:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        M KGS +MIL LALG+LSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG  RGHLIVNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LIC8 Barwin domain-containing protein8.06e-102100Show/hide
Query:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
Subjt:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC

A0A1S3C3H6 pathogenesis-related protein PR-4-like7.46e-9896.48Show/hide
Query:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        M KGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDA+KPLEWRR+YGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
Subjt:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGN RGHL VNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC

A0A5D3D4G8 Pathogenesis-related protein PR-4-like7.46e-9896.48Show/hide
Query:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        M KGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDA+KPLEWRR+YGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
Subjt:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGN RGHL VNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC

A0A6J1G2U1 pathogenesis-related protein PR-4-like4.66e-9291.55Show/hide
Query:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        M K SI+MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG  RGHLIVNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC

A0A6J1K9X1 pathogenesis-related protein PR-4-like1.14e-9290.85Show/hide
Query:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        M KGS +MIL LALG+LSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG  RGHLIVNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN12.6e-5577.31Show/hide
Query:  SATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDT
        SA NVRATYH+YNPQ++ WD    S +C+TWDA+KPL WR++YGWTAFCGPVGPRGRDSCG+CLRVTNT TGA   VRIVDQC+NGGLDLDVNVFR+IDT
Subjt:  SATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDT

Query:  NGNGNLRGHLIVNYQFVNC
        +GNGN +GHLIVNYQFV+C
Subjt:  NGNGNLRGHLIVNYQFVNC

P09762 Wound-induced protein WIN22.4e-5374.79Show/hide
Query:  SATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDT
        SA NVRATYH+YNPQ++ WD    S +C+TWDA+KP  WR +YGWTAFCGPVGPRGRDSCG+CLRVTNT TGA   VRIVDQC+NGGLDLD+NVF++IDT
Subjt:  SATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDT

Query:  NGNGNLRGHLIVNYQFVNC
        +G GN +GHLIVNYQFVNC
Subjt:  NGNGNLRGHLIVNYQFVNC

P29062 Pathogenesis-related protein PR-4A2.3e-5671.53Show/hide
Query:  IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQ
        + + L++   V+++A AQSATNVR+TYHLYNPQ+INWD   AS FCATWDADKPL WR++YGWTAFCGP GPRG+DSCGRCLRVTNT TG    VRIVDQ
Subjt:  IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQ

Query:  CANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC
        C+NGGLDLDVNVF ++DTNG G  +GHL VNY+FVNC
Subjt:  CANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC

P29063 Pathogenesis-related protein PR-4B1.4e-5671.53Show/hide
Query:  IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQ
        + + L++   ++++A AQSATNVR+TYHLYNPQ+INWD   AS FCATWDADKPL WR++YGWTAFCGP GPRG+DSCGRCLRVTNT TG    VRIVDQ
Subjt:  IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQ

Query:  CANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC
        C+NGGLDLDVNVF ++DTNG G  +GHLIVNY+FVNC
Subjt:  CANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC

P32045 Pathogenesis-related protein P21.1e-5677.95Show/hide
Query:  VLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDV
        ++++A AQSATNVRATYHLYNPQ+INWD   ASV+CATWDADKPLEWRR+YGWTAFCGP GP G+ SCGRCLRVTNT TG  E VRIVDQC NGGLDLDV
Subjt:  VLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDV

Query:  NVFRRIDTNGNGNLRGHLIVNYQFVNC
        NVF R+DTNG G  RG+L VNY+FVNC
Subjt:  NVFRRIDTNGNGNLRGHLIVNYQFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 45.4e-4867.5Show/hide
Query:  QSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRID
        +SA+NVRATYH YNP   NWD    S +C+TWDADKP  WR +YGWTAFCGP GPRG+ SCG+CLRV NT T A+  VRIVDQC+NGGLDLDV +F +ID
Subjt:  QSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRID

Query:  TNGNGNLRGHLIVNYQFVNC
        T+G G  +GHLIV+YQFV+C
Subjt:  TNGNGNLRGHLIVNYQFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAAGGAAGTATTATGATGATATTGGTGTTGGCTTTGGGGGTTTTGAGCTTAGCAAATGCTCAAAGTGCCACAAATGTAAGAGCTACCTATCATTTGTACAACCC
ACAAGACATCAATTGGGATTATCTTAGGGCAAGTGTTTTTTGTGCAACATGGGATGCCGACAAGCCTTTGGAATGGCGTCGTCAATACGGTTGGACTGCCTTCTGTGGCC
CTGTTGGCCCTCGTGGCCGTGATTCTTGTGGACGTTGTTTGAGGGTGACTAACACTGAAACGGGAGCTTCGGAAATAGTAAGAATTGTTGATCAATGCGCAAATGGAGGG
CTAGATTTAGACGTGAATGTGTTCAGGAGGATTGATACTAATGGAAATGGAAACTTGAGAGGCCATCTTATTGTCAACTATCAATTTGTCAATTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAAGGAAGTATTATGATGATATTGGTGTTGGCTTTGGGGGTTTTGAGCTTAGCAAATGCTCAAAGTGCCACAAATGTAAGAGCTACCTATCATTTGTACAACCC
ACAAGACATCAATTGGGATTATCTTAGGGCAAGTGTTTTTTGTGCAACATGGGATGCCGACAAGCCTTTGGAATGGCGTCGTCAATACGGTTGGACTGCCTTCTGTGGCC
CTGTTGGCCCTCGTGGCCGTGATTCTTGTGGACGTTGTTTGAGGGTGACTAACACTGAAACGGGAGCTTCGGAAATAGTAAGAATTGTTGATCAATGCGCAAATGGAGGG
CTAGATTTAGACGTGAATGTGTTCAGGAGGATTGATACTAATGGAAATGGAAACTTGAGAGGCCATCTTATTGTCAACTATCAATTTGTCAATTGCTAA
Protein sequenceShow/hide protein sequence
MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGG
LDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC