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Cucsat.G19584 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G19584
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description50S ribosomal protein L27-like
Genome locationctg4:2786032..2789136
RNA-Seq ExpressionCucsat.G19584
SyntenyCucsat.G19584
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001684 - Ribosomal protein L27


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139171.1 uncharacterized protein LOC101207653 [Cucumis sativus]5.46e-40100Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE
        MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE

XP_016901663.1 PREDICTED: 50S ribosomal protein L27-like [Cucumis melo]1.02e-3797.14Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE
        MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDS PK LGVKKFGGE
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE

XP_022157050.1 uncharacterized protein LOC111023867 [Momordica charantia]7.12e-3591.43Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE
        MLNIAT FCKRLNVKDLVTNVPVYSSFSDGA  GL+LLFRRWATKKTAGSTKNGRDS PK LGVKKFGGE
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE

XP_022970580.1 uncharacterized protein LOC111469515 [Cucurbita maxima]3.77e-3591.43Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE
        MLNIATTFCKRLNVKDLVTNVPVYSSFSDG+  GL+LLFRRWATKKTAGSTKNGRDS PK LGVKKFGGE
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE

XP_038877023.1 50S ribosomal protein L27-like [Benincasa hispida]7.55e-3579.52Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGEVSGRTNKNHIVIK
        MLNIATTFCKRLNVKDLVT VPVYSSFSDGA  GL+LLFRRWATKKTAGSTKNGRDS PK LGVKKFGGE   R    +I+++
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGEVSGRTNKNHIVIK

TrEMBL top hitse value%identityAlignment
A0A0A0LIQ3 Uncharacterized protein2.64e-40100Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE
        MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE

A0A1S4E0A6 50S ribosomal protein L27-like4.92e-3897.14Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE
        MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDS PK LGVKKFGGE
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE

A0A5A7TXR2 50S ribosomal protein L27-like4.92e-3897.14Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE
        MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDS PK LGVKKFGGE
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE

A0A6J1DS22 uncharacterized protein LOC1110238673.45e-3591.43Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE
        MLNIAT FCKRLNVKDLVTNVPVYSSFSDGA  GL+LLFRRWATKKTAGSTKNGRDS PK LGVKKFGGE
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE

A0A6J1I390 uncharacterized protein LOC1114695151.82e-3591.43Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE
        MLNIATTFCKRLNVKDLVTNVPVYSSFSDG+  GL+LLFRRWATKKTAGSTKNGRDS PK LGVKKFGGE
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE

SwissProt top hitse value%identityAlignment
C1CZK0 50S ribosomal protein L271.4e-0585.71Show/hide
Query:  ATKKTAGSTKNGRDSNPKYLGVKKFGGE
        A KK  GS+KNGRDSNPKYLGVKKFGGE
Subjt:  ATKKTAGSTKNGRDSNPKYLGVKKFGGE

Q0BZ41 50S ribosomal protein L271.1e-0579.31Show/hide
Query:  ATKKTAGSTKNGRDSNPKYLGVKKFGGEV
        A KK+ GS++NGRDSNPKYLGVKK+GGEV
Subjt:  ATKKTAGSTKNGRDSNPKYLGVKKFGGEV

Q1IW73 50S ribosomal protein L271.4e-0585.71Show/hide
Query:  ATKKTAGSTKNGRDSNPKYLGVKKFGGE
        A KK  GS+KNGRDSNPKYLGVKKFGGE
Subjt:  ATKKTAGSTKNGRDSNPKYLGVKKFGGE

Q5X1P0 50S ribosomal protein L271.9e-0558.54Show/hide
Query:  ATKKTAGSTKNGRDSNPKYLGVKKFGGEVSGRTNKNHIVIK
        A KK  GST+NGRDSNPKYLGVK+FGG+     N   I+++
Subjt:  ATKKTAGSTKNGRDSNPKYLGVKKFGGEVSGRTNKNHIVIK

Q9RY65 50S ribosomal protein L274.9e-0686.21Show/hide
Query:  ATKKTAGSTKNGRDSNPKYLGVKKFGGEV
        A KK  GS+KNGRDSNPKYLGVKKFGGEV
Subjt:  ATKKTAGSTKNGRDSNPKYLGVKKFGGEV

Arabidopsis top hitse value%identityAlignment
AT2G16930.1 Ribosomal protein L27 family protein3.9e-2266.2Show/hide
Query:  LNIATTFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE
        LN A + C+R+++++L+T VP Y  SS SDG+++GL+L+ +RWATKKTAGSTKNGRDSNPK+LGVKKFGGE
Subjt:  LNIATTFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE

AT2G16930.2 Ribosomal protein L27 family protein3.9e-2266.2Show/hide
Query:  LNIATTFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE
        LN A + C+R+++++L+T VP Y  SS SDG+++GL+L+ +RWATKKTAGSTKNGRDSNPK+LGVKKFGGE
Subjt:  LNIATTFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE

AT2G16930.3 Ribosomal protein L27 family protein3.9e-2266.2Show/hide
Query:  LNIATTFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE
        LN A + C+R+++++L+T VP Y  SS SDG+++GL+L+ +RWATKKTAGSTKNGRDSNPK+LGVKKFGGE
Subjt:  LNIATTFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE

AT5G15220.1 Ribosomal protein L27 family protein7.8e-2367.61Show/hide
Query:  LNIATTFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE
        LN A + C+R+++++L+T VP Y  SS SDG+++GL+L+F+RWATKKTAGSTKNGRDSNPK+LGVKKFGGE
Subjt:  LNIATTFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSNPKYLGVKKFGGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATCGGCGTTGTTCATCTTCTCACCTGCGATTCACAAACGGTCACCACCACCGTCCTCCTTCATTCGGCGATTCACGAACCACACCACCACCTTCAGTTTTTTCGCTGCC
TCCGTCGCGGCCGCCGTTCAAGGATAAACTACATATACATACAACCATGCTTAATATTGCGACCACGTTTTGCAAGCGACTGAATGTCAAGGATTTGGTGACCAATGTTC
CTGTCTATAGCAGTTTTAGTGATGGAGCTACTGCTGGATTAAACTTATTATTCAGACGTTGGGCTACCAAAAAGACAGCTGGATCAACAAAAAATGGACGAGACTCGAAT
CCCAAGTATCTTGGTGTAAAGAAATTTGGTGGGGAGGTGAGTGGCAGGACAAACAAAAATCACATTGTCATAAAACTTGCACTGAAATTTCTATTTATTGAAGCGGTTTT
GTTGTTAACTTATTTACGGAGAGTTATTCCTTCTGGATACAGAGAGTTATTCCCGGTAACATTATTGTTCGTCAACGGGGCACTCGGTTTCATCCTGGAGATTATGTTGG
AATAG
mRNA sequenceShow/hide mRNA sequence
CATCGGCGTTGTTCATCTTCTCACCTGCGATTCACAAACGGTCACCACCACCGTCCTCCTTCATTCGGCGATTCACGAACCACACCACCACCTTCAGTTTTTTCGCTGCC
TCCGTCGCGGCCGCCGTTCAAGGATAAACTACATATACATACAACCATGCTTAATATTGCGACCACGTTTTGCAAGCGACTGAATGTCAAGGATTTGGTGACCAATGTTC
CTGTCTATAGCAGTTTTAGTGATGGAGCTACTGCTGGATTAAACTTATTATTCAGACGTTGGGCTACCAAAAAGACAGCTGGATCAACAAAAAATGGACGAGACTCGAAT
CCCAAGTATCTTGGTGTAAAGAAATTTGGTGGGGAGGTGAGTGGCAGGACAAACAAAAATCACATTGTCATAAAACTTGCACTGAAATTTCTATTTATTGAAGCGGTTTT
GTTGTTAACTTATTTACGGAGAGTTATTCCTTCTGGATACAGAGAGTTATTCCCGGTAACATTATTGTTCGTCAACGGGGCACTCGGTTTCATCCTGGAGATTATGTTGG
AATAG
Protein sequenceShow/hide protein sequence
HRRCSSSHLRFTNGHHHRPPSFGDSRTTPPPSVFSLPPSRPPFKDKLHIHTTMLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSN
PKYLGVKKFGGEVSGRTNKNHIVIKLALKFLFIEAVLLLTYLRRVIPSGYRELFPVTLLFVNGALGFILEIMLE