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Cucsat.G1960 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G1960
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionchaperonin-like RBCX protein 1, chloroplastic
Genome locationctg1002:4786997..4788432
RNA-Seq ExpressionCucsat.G1960
SyntenyCucsat.G1960
Gene Ontology termsGO:0006270 - DNA replication initiation (biological process)
GO:0009409 - response to cold (biological process)
GO:0009414 - response to water deprivation (biological process)
GO:0009651 - response to salt stress (biological process)
GO:0015977 - carbon fixation (biological process)
GO:0015979 - photosynthesis (biological process)
GO:0110102 - chloroplast ribulose bisphosphate carboxylase complex assembly (biological process)
GO:0033314 - mitotic DNA replication checkpoint (biological process)
GO:0061077 - chaperone-mediated protein folding (biological process)
GO:0005664 - nuclear origin of replication recognition complex (cellular component)
GO:0009534 - chloroplast thylakoid (cellular component)
GO:0044183 - protein folding chaperone (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0003688 - DNA replication origin binding (molecular function)
InterPro domainsIPR038052 - Chaperonin-like RbcX superfamily
IPR003435 - Chaperonin-like RbcX


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN49472.2 hypothetical protein Csa_003132 [Cucumis sativus]8.57e-10399.33Show/hide
Query:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
        MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
Subjt:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH

Query:  SLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKM
        SLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFK+
Subjt:  SLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKM

XP_004134778.1 chaperonin-like RBCX protein 1, chloroplastic [Cucumis sativus]1.82e-120100Show/hide
Query:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
        MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
Subjt:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH

Query:  SLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK
        SLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK
Subjt:  SLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK

XP_008440039.1 PREDICTED: uncharacterized protein LOC103484635 [Cucumis melo]1.18e-11697.11Show/hide
Query:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
        MESSARILSPTQFPS+FSLPNLNRGNVFPVRPIKPRA K MRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
Subjt:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH

Query:  SLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK
        SLNDGDKFLASLMRESSRHK+LALRILEVRSAYCKNDFEWDNLKRLAFKMV ESNTRIMREYLTETSPSDTEK
Subjt:  SLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK

XP_022132911.1 chaperonin-like RBCX protein 1, chloroplastic [Momordica charantia]9.11e-10184.57Show/hide
Query:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRA--FKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLD
        MESSAR+LSPTQFPSLF LPNLNR  VFP+ P KP+A  F  ++L C KMYVPGFGEASPE+KAA+NLHNFFTYVAVRIV AQLESYNPEA++ELMEFLD
Subjt:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRA--FKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLD

Query:  RHSLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK
        RHSLNDGDKFLASLMRESSRHK+LALRILEVRSAYCKNDFEWDNLKRLA KM SESNTR+MREY+TETSPS+TEK
Subjt:  RHSLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK

XP_038881664.1 chaperonin-like RBCX protein 1, chloroplastic isoform X1 [Benincasa hispida]1.74e-10992.49Show/hide
Query:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
        ME SARILS TQFPSLF LPNLNR NVFPV P KP+A K MRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAY ELMEFLDRH
Subjt:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH

Query:  SLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK
        SLNDGDKFLASLMRESSRHK+LALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTR+MREY+TETSPSDTEK
Subjt:  SLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK

TrEMBL top hitse value%identityAlignment
A0A0A0KMZ4 Uncharacterized protein8.83e-121100Show/hide
Query:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
        MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
Subjt:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH

Query:  SLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK
        SLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK
Subjt:  SLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK

A0A1S3B054 uncharacterized protein LOC1034846355.73e-11797.11Show/hide
Query:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
        MESSARILSPTQFPS+FSLPNLNRGNVFPVRPIKPRA K MRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
Subjt:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH

Query:  SLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK
        SLNDGDKFLASLMRESSRHK+LALRILEVRSAYCKNDFEWDNLKRLAFKMV ESNTRIMREYLTETSPSDTEK
Subjt:  SLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK

A0A5D3CNU4 Chaperonin-like RBCX protein 15.73e-11797.11Show/hide
Query:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
        MESSARILSPTQFPS+FSLPNLNRGNVFPVRPIKPRA K MRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
Subjt:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH

Query:  SLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK
        SLNDGDKFLASLMRESSRHK+LALRILEVRSAYCKNDFEWDNLKRLAFKMV ESNTRIMREYLTETSPSDTEK
Subjt:  SLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK

A0A6J1BTL5 chaperonin-like RBCX protein 1, chloroplastic4.41e-10184.57Show/hide
Query:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRA--FKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLD
        MESSAR+LSPTQFPSLF LPNLNR  VFP+ P KP+A  F  ++L C KMYVPGFGEASPE+KAA+NLHNFFTYVAVRIV AQLESYNPEA++ELMEFLD
Subjt:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRA--FKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLD

Query:  RHSLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK
        RHSLNDGDKFLASLMRESSRHK+LALRILEVRSAYCKNDFEWDNLKRLA KM SESNTR+MREY+TETSPS+TEK
Subjt:  RHSLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK

A0A6J1KRH1 chaperonin-like RBCX protein 1, chloroplastic3.81e-9984.97Show/hide
Query:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
        MES ARILSPT FPSLF LPNLNR N  PV P KP A K +RLHC KMYVPGFGEASPE+KAA+NLHNFFTYVAVRIVTAQLESYNPEA+ ELMEFLDRH
Subjt:  MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH

Query:  SLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK
        SLNDGDKFL++LMRESSRHK+LALRILEVRSAYCKNDFEWDNLKRLA KMV ESNTR+MREY+TETSP D EK
Subjt:  SLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK

SwissProt top hitse value%identityAlignment
A0A0H3K9R3 RuBisCO chaperone RbcX7.4e-0430.69Show/hide
Query:  ARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREY
        AR L N+ TY AV ++  QL   NP     L  F    S  DG+ +LA+L+   +  + L LR++ VR    ++    D L  +    + E+N    R  
Subjt:  ARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREY

Query:  L
        L
Subjt:  L

Q31N04 RuBisCO chaperone RbcX7.4e-0430.69Show/hide
Query:  ARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREY
        AR L N+ TY AV ++  QL   NP     L  F    S  DG+ +LA+L+   +  + L LR++ VR    ++    D L  +    + E+N    R  
Subjt:  ARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREY

Query:  L
        L
Subjt:  L

Q44177 RuBisCO chaperone RbcX7.1e-0732.76Show/hide
Query:  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESN---TR
        + A  L ++ TY AVR+++ QL   NP   + L EF  RH + + D +L ++M E   +K L LRIL VR    +   E+  L  +    + +SN    R
Subjt:  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESN---TR

Query:  IMREYLTETSPSDTEK
         + E LT+   S T++
Subjt:  IMREYLTETSPSDTEK

Q8L9X2 Chaperonin-like RbcX protein 2, chloroplastic3.3e-0435.45Show/hide
Query:  RNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKALALRILEVR-SAYCKNDFEWDNLKRLAFKMVSESNTRIMREY
        + + N+FTY AVR V  QL   NP  Y      +  +   DG +FL +L +ES   + LA R++  R   Y K   + D+ K   ++ +S+ N  +MRE 
Subjt:  RNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKALALRILEVR-SAYCKNDFEWDNLKRLAFKMVSESNTRIMREY

Query:  LTETS--PSD
        L ET   PSD
Subjt:  LTETS--PSD

Q94AU9 Chaperonin-like RBCX protein 1, chloroplastic6.6e-5374.45Show/hide
Query:  RAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKALALRILEVRSAYCK
        R  K  R+  +KMYVPGFGEASPE+KAA++LH+FFTYVAVRIV+AQLESYNPEAY+EL EFLD +S++DGDKF A+LMR SSRH  LALRILEVRSAYCK
Subjt:  RAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKALALRILEVRSAYCK

Query:  NDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTE
        NDFEWDN+KRLAFK V +SNTR+MREY+ ETS  +T+
Subjt:  NDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTE

Arabidopsis top hitse value%identityAlignment
AT4G04330.1 Chaperonin-like RbcX protein4.7e-5474.45Show/hide
Query:  RAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKALALRILEVRSAYCK
        R  K  R+  +KMYVPGFGEASPE+KAA++LH+FFTYVAVRIV+AQLESYNPEAY+EL EFLD +S++DGDKF A+LMR SSRH  LALRILEVRSAYCK
Subjt:  RAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKALALRILEVRSAYCK

Query:  NDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTE
        NDFEWDN+KRLAFK V +SNTR+MREY+ ETS  +T+
Subjt:  NDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTE

AT5G19855.1 Chaperonin-like RbcX protein2.4e-0535.45Show/hide
Query:  RNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKALALRILEVR-SAYCKNDFEWDNLKRLAFKMVSESNTRIMREY
        + + N+FTY AVR V  QL   NP  Y      +  +   DG +FL +L +ES   + LA R++  R   Y K   + D+ K   ++ +S+ N  +MRE 
Subjt:  RNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKALALRILEVR-SAYCKNDFEWDNLKRLAFKMVSESNTRIMREY

Query:  LTETS--PSD
        L ET   PSD
Subjt:  LTETS--PSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCATCAGCAAGGATTCTTTCTCCTACTCAGTTCCCTTCTCTTTTCTCACTACCAAATTTAAACAGAGGCAATGTTTTTCCTGTTAGGCCAATAAAGCCAAGAGC
TTTCAAGCCTATGCGCTTGCATTGCAGTAAGATGTATGTCCCCGGGTTTGGAGAGGCCTCACCAGAATCCAAGGCAGCCAGAAATCTGCACAATTTCTTCACGTATGTTG
CTGTTAGGATAGTGACTGCGCAGCTTGAGAGCTATAATCCAGAGGCGTACCTGGAGTTAATGGAGTTTCTCGATAGACATTCACTGAATGATGGGGACAAATTTCTGGCC
AGTTTGATGCGGGAATCGTCAAGGCATAAAGCTCTTGCATTGCGTATACTAGAGGTTCGATCTGCATACTGCAAAAACGATTTTGAGTGGGACAACCTCAAGCGATTAGC
TTTCAAAATGGTTAGCGAATCCAACACAAGAATAATGAGGGAGTACTTGACAGAGACAAGTCCATCAGACACCGAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCATCAGCAAGGATTCTTTCTCCTACTCAGTTCCCTTCTCTTTTCTCACTACCAAATTTAAACAGAGGCAATGTTTTTCCTGTTAGGCCAATAAAGCCAAGAGC
TTTCAAGCCTATGCGCTTGCATTGCAGTAAGATGTATGTCCCCGGGTTTGGAGAGGCCTCACCAGAATCCAAGGCAGCCAGAAATCTGCACAATTTCTTCACGTATGTTG
CTGTTAGGATAGTGACTGCGCAGCTTGAGAGCTATAATCCAGAGGCGTACCTGGAGTTAATGGAGTTTCTCGATAGACATTCACTGAATGATGGGGACAAATTTCTGGCC
AGTTTGATGCGGGAATCGTCAAGGCATAAAGCTCTTGCATTGCGTATACTAGAGGTTCGATCTGCATACTGCAAAAACGATTTTGAGTGGGACAACCTCAAGCGATTAGC
TTTCAAAATGGTTAGCGAATCCAACACAAGAATAATGAGGGAGTACTTGACAGAGACAAGTCCATCAGACACCGAGAAGTGA
Protein sequenceShow/hide protein sequence
MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLA
SLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKMVSESNTRIMREYLTETSPSDTEK