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Cucsat.G19683 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G19683
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionMechanosensitive channel of smallconductance-like 4
Genome locationctg4:4966331..4967708
RNA-Seq ExpressionCucsat.G19683
SyntenyCucsat.G19683
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER26939.1 mechanosensitive channel of smallconductance-like 4 [Striga asiatica]3.94e-0838.24Show/hide
Query:  LSRNKSEITGISTSLSTTFTPVDKTKSVLGVSRHAESINEASGKYRFLETIGAALSIKARKNQADGGKIVRR---RAESVEKLTELGTLLGGRFATLNPI
        L  N+ E+ G  T L     PV++   V GV+RHAE + EA G+    +++ + L+     +QADG ++V      AE V+KL E GTL GGR A L+P+
Subjt:  LSRNKSEITGISTSLSTTFTPVDKTKSVLGVSRHAESINEASGKYRFLETIGAALSIKARKNQADGGKIVRR---RAESVEKLTELGTLLGGRFATLNPI

Query:  KE
        ++
Subjt:  KE
KAG2692006.1 hypothetical protein I3760_08G032900 [Carya illinoinensis]2.55e-2058.67Show/hide
Query:  KSVLGVSRHAESINEASGKYRFLETIGAALSIKARKNQADGGKIVRRRAESVEKLTELGTLLGGRFATLNPIKET
        + ++GV+ HAES++EA G+   L+TIGAALS++ RK+QADG ++V R AE VE+L ELGTLLGGR A L+P +ET
Subjt:  KSVLGVSRHAESINEASGKYRFLETIGAALSIKARKNQADGGKIVRRRAESVEKLTELGTLLGGRFATLNPIKET
TrEMBL top hitse value%identityAlignment
A0A5A7P2H1 Mechanosensitive channel of smallconductance-like 41.91e-0838.24Show/hide
Query:  LSRNKSEITGISTSLSTTFTPVDKTKSVLGVSRHAESINEASGKYRFLETIGAALSIKARKNQADGGKIVRR---RAESVEKLTELGTLLGGRFATLNPI
        L  N+ E+ G  T L     PV++   V GV+RHAE + EA G+    +++ + L+     +QADG ++V      AE V+KL E GTL GGR A L+P+
Subjt:  LSRNKSEITGISTSLSTTFTPVDKTKSVLGVSRHAESINEASGKYRFLETIGAALSIKARKNQADGGKIVRR---RAESVEKLTELGTLLGGRFATLNPI

Query:  KE
        ++
Subjt:  KE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAAAGGAAAAGAAAAAGAAAAGCAGGGCTGACCTCAGCCGCAACAAGAGCGAAATTACCGGCATTAGCACCAGTCTTAGCACCACCTTTACGCCAGTTGATAA
GACGAAGAGCGTCCTCGGAGTCTCTAGACATGCCGAGAGCATCAATGAGGCAAGTGGCAAGTACAGATTCCTTGAGACCATAGGTGCCGCGCTCTCGATCAAGGCTAGGA
AGAATCAAGCGGATGGCGGAAAAATAGTGAGAAGGAGAGCAGAAAGTGTCGAGAAACTTACGGAACTTGGAACGCTTCTTGGCGGAAGATTTGCTACGCTGAATCCAATC
AAAGAGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAAAGGAAAAGAAAAAGAAAAGCAGGGCTGACCTCAGCCGCAACAAGAGCGAAATTACCGGCATTAGCACCAGTCTTAGCACCACCTTTACGCCAGTTGATAA
GACGAAGAGCGTCCTCGGAGTCTCTAGACATGCCGAGAGCATCAATGAGGCAAGTGGCAAGTACAGATTCCTTGAGACCATAGGTGCCGCGCTCTCGATCAAGGCTAGGA
AGAATCAAGCGGATGGCGGAAAAATAGTGAGAAGGAGAGCAGAAAGTGTCGAGAAACTTACGGAACTTGGAACGCTTCTTGGCGGAAGATTTGCTACGCTGAATCCAATC
AAAGAGACTTGA
Protein sequenceShow/hide protein sequence
MEEKEKKKKSRADLSRNKSEITGISTSLSTTFTPVDKTKSVLGVSRHAESINEASGKYRFLETIGAALSIKARKNQADGGKIVRRRAESVEKLTELGTLLGGRFATLNPI
KET