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Cucsat.G19725 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G19725
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionElf4 domain-containing protein
Genome locationctg4:145202..147472
RNA-Seq ExpressionCucsat.G19725
SyntenyCucsat.G19725
Gene Ontology termsGO:0009649 - entrainment of circadian clock (biological process)
GO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR009741 - Protein EARLY FLOWERING 4 domain
IPR040462 - Protein EARLY FLOWERING 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061471.1 protein ELF4-LIKE 3-like [Cucumis melo var. makuwa]2.13e-5795Show/hide
Query:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP
        M+GETLSRGEIDGKMVQRFQ NFVQVQNILEQNRMLINEINQNQESRMAG VSRNVGLIRELNNNIRRVVDLYADLSTSFT S EHGDSAAKPGYKRNRP
Subjt:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP

KGN60512.1 hypothetical protein Csa_019281 [Cucumis sativus]8.02e-62100Show/hide
Query:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP
        MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP
Subjt:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP

XP_022946747.1 protein ELF4-LIKE 3-like [Cucurbita moschata]6.45e-4374.31Show/hide
Query:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAA
        MEGETLS G      ++DGKM Q FQKNFVQVQNIL+QNR+LINEINQN ES+M  N++RNVGLIRELNNNIRRVVDLYA LS SFTKS E    G+SAA
Subjt:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAA

Query:  KPGYKRNRP
        KPG+KRNRP
Subjt:  KPGYKRNRP

XP_023521403.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo]3.72e-4273.39Show/hide
Query:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAA
        MEGETLS G      ++DGKM   FQKNFVQVQNIL+QNR+LINEINQN ES+M  N++RNVGLIRELNNNIRRVVDLYA LS SFTKS E    G+SAA
Subjt:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAA

Query:  KPGYKRNRP
        KPG+KRNRP
Subjt:  KPGYKRNRP

XP_038890489.1 protein ELF4-LIKE 3-like [Benincasa hispida]1.38e-4677.57Show/hide
Query:  MEGETLSRG-------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKP
        MEGETLS G       E+DGKMVQ FQKNFVQV+NIL+QNR+LINEINQN ES+M  N++RNVGLIRELNNNIRRVVDLYADLSTSFTKS + GDSA KP
Subjt:  MEGETLSRG-------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKP

Query:  GYKRNRP
        G+KRNRP
Subjt:  GYKRNRP

TrEMBL top hitse value%identityAlignment
A0A0A0LIL2 Elf4 domain-containing protein3.88e-62100Show/hide
Query:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP
        MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP
Subjt:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP

A0A1U7WX74 protein ELF4-LIKE 3-like2.04e-4072.12Show/hide
Query:  MEGETLSR----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYK
        MEG+TLS      +IDGK+VQ FQKNFVQVQNIL+QNR+LINEINQNQES++  N+SRNVGLIRELNNNIRRVVDLYADLSTSFTKS ++       G+K
Subjt:  MEGETLSR----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYK

Query:  RNRP
        R+RP
Subjt:  RNRP

A0A5D3CFW0 Protein ELF4-LIKE 3-like1.03e-5795Show/hide
Query:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP
        M+GETLSRGEIDGKMVQRFQ NFVQVQNILEQNRMLINEINQNQESRMAG VSRNVGLIRELNNNIRRVVDLYADLSTSFT S EHGDSAAKPGYKRNRP
Subjt:  MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP

A0A6J1G4K6 protein ELF4-LIKE 3-like3.12e-4374.31Show/hide
Query:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAA
        MEGETLS G      ++DGKM Q FQKNFVQVQNIL+QNR+LINEINQN ES+M  N++RNVGLIRELNNNIRRVVDLYA LS SFTKS E    G+SAA
Subjt:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAA

Query:  KPGYKRNRP
        KPG+KRNRP
Subjt:  KPGYKRNRP

A0A6J1KJ14 protein ELF4-LIKE 3-like3.12e-4374.31Show/hide
Query:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAA
        MEGETLS G      ++DGKM Q FQKNFVQVQNIL+QNR+LINEINQN ES+M  N++RNVGLIRELNNNIRRVVDLYA LS SFTKS E    G+SAA
Subjt:  MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAA

Query:  KPGYKRNRP
        KPG+KRNRP
Subjt:  KPGYKRNRP

SwissProt top hitse value%identityAlignment
O04211 Protein EARLY FLOWERING 42.7e-1448.35Show/hide
Query:  ETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG
        E   +GE D  M +   +NF QVQ++L++NR LI ++N N +SRMA N+S+NV LI+ELN NI +VV++Y+DL+TSF+ S  HG      G
Subjt:  ETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG

O80877 Protein ELF4-LIKE 18.9e-1042.17Show/hide
Query:  DGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG
        D ++       F + Q  L+QNR LI  +N+N  SR+  NVSRNVGLI E+N NI +V+++Y+DLS +F K  +      K G
Subjt:  DGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG

Q570U6 Protein ELF4-LIKE 43.5e-2258.16Show/hide
Query:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG
        MEG+ LS    R  +DGK++Q FQK+FV VQ+IL+QNR+LINEINQN ES+   N+ RNVGLI+ELNNNIRRV  LY DLS SF +S +        G
Subjt:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG

Q8S8F5 Protein ELF4-LIKE 32.6e-2559.26Show/hide
Query:  MEGETLSR-----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAAK
        MEG+T+SR      ++DGK++Q F+K+FVQVQNIL+ NR+LINEINQN ES++  N+ RNVGLIRELNNN+RRV  LY DLS +F+KS E    GDS+  
Subjt:  MEGETLSR-----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAAK

Query:  PGYKRNRP
         G +R RP
Subjt:  PGYKRNRP

Q94BS8 Protein ELF4-LIKE 24.5e-2258.16Show/hide
Query:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG
        MEG+  S    R ++DGK++Q FQK+FVQVQ+IL+QNR+LINEINQN ES+ A ++ RNVGLIRELNNNIR V  LY DLS SF +S +        G
Subjt:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG

Arabidopsis top hitse value%identityAlignment
AT1G17455.1 ELF4-like 42.5e-2358.16Show/hide
Query:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG
        MEG+ LS    R  +DGK++Q FQK+FV VQ+IL+QNR+LINEINQN ES+   N+ RNVGLI+ELNNNIRRV  LY DLS SF +S +        G
Subjt:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG

AT1G17455.2 ELF4-like 42.5e-2358.16Show/hide
Query:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG
        MEG+ LS    R  +DGK++Q FQK+FV VQ+IL+QNR+LINEINQN ES+   N+ RNVGLI+ELNNNIRRV  LY DLS SF +S +        G
Subjt:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG

AT1G72630.1 ELF4-like 23.2e-2358.16Show/hide
Query:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG
        MEG+  S    R ++DGK++Q FQK+FVQVQ+IL+QNR+LINEINQN ES+ A ++ RNVGLIRELNNNIR V  LY DLS SF +S +        G
Subjt:  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG

AT2G06255.1 ELF4-like 31.8e-2659.26Show/hide
Query:  MEGETLSR-----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAAK
        MEG+T+SR      ++DGK++Q F+K+FVQVQNIL+ NR+LINEINQN ES++  N+ RNVGLIRELNNN+RRV  LY DLS +F+KS E    GDS+  
Subjt:  MEGETLSR-----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAAK

Query:  PGYKRNRP
         G +R RP
Subjt:  PGYKRNRP

AT2G40080.1 Protein of unknown function (DUF1313)1.9e-1548.35Show/hide
Query:  ETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG
        E   +GE D  M +   +NF QVQ++L++NR LI ++N N +SRMA N+S+NV LI+ELN NI +VV++Y+DL+TSF+ S  HG      G
Subjt:  ETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGGGAGACATTGTCAAGAGGAGAAATTGATGGGAAAATGGTGCAGAGATTTCAAAAGAATTTCGTTCAAGTACAGAACATTTTGGAGCAAAACAGAATGTTGAT
CAATGAAATAAACCAAAATCAGGAGTCGAGAATGGCGGGTAATGTGAGCAGAAACGTGGGTCTGATTCGAGAGCTGAACAACAACATCAGAAGAGTTGTTGATTTATATG
CTGATCTCTCCACTTCCTTCACCAAATCCAACGAACATGGAGACTCCGCGGCCAAGCCTGGCTACAAGCGCAACCGCCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGGGAGACATTGTCAAGAGGAGAAATTGATGGGAAAATGGTGCAGAGATTTCAAAAGAATTTCGTTCAAGTACAGAACATTTTGGAGCAAAACAGAATGTTGAT
CAATGAAATAAACCAAAATCAGGAGTCGAGAATGGCGGGTAATGTGAGCAGAAACGTGGGTCTGATTCGAGAGCTGAACAACAACATCAGAAGAGTTGTTGATTTATATG
CTGATCTCTCCACTTCCTTCACCAAATCCAACGAACATGGAGACTCCGCGGCCAAGCCTGGCTACAAGCGCAACCGCCCATAG
Protein sequenceShow/hide protein sequence
MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP