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Cucsat.G19760 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G19760
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionProtein NUCLEAR FUSION DEFECTIVE 6
Genome locationctg4:717949..720975
RNA-Seq ExpressionCucsat.G19760
SyntenyCucsat.G19760
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061549.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]4.62e-5095.83Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVIF
        MASLKAVSRLSSRLQSL+PKFNKRSSSSELFS KSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ +F
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVIF

KAG6599455.1 hypothetical protein SDJN03_09233, partial [Cucurbita argyrosperma subsp. sororia]3.52e-4684.62Show/hide
Query:  LKASLRTKKSPMASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWG
        L+  L  KKS MASL+AVSRLSSRLQSLAPK NKRS SSEL  FKS CQSQPSAASTSR+ CTSRLP+ELSSQGSLMPLHSAIAAARLISSL+IESQGWG
Subjt:  LKASLRTKKSPMASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWG

Query:  LVPQ
        LVPQ
Subjt:  LVPQ

XP_004139345.1 uncharacterized protein LOC101209110 [Cucumis sativus]1.50e-51100Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
        MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ

XP_008458440.1 PREDICTED: uncharacterized protein LOC103497847 isoform X1 [Cucumis melo]7.07e-5097.85Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
        MASLKAVSRLSSRLQSL+PKFNKRSSSSELFS KSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ

XP_008458447.1 PREDICTED: uncharacterized protein LOC103497847 isoform X2 [Cucumis melo]1.74e-5097.87Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQV
        MASLKAVSRLSSRLQSL+PKFNKRSSSSELFS KSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQV
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQV

TrEMBL top hitse value%identityAlignment
A0A0A0LKT5 Uncharacterized protein7.27e-52100Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
        MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ

A0A1S3C7U8 uncharacterized protein LOC103497847 isoform X13.42e-5097.85Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
        MASLKAVSRLSSRLQSL+PKFNKRSSSSELFS KSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ

A0A1S3C7Z3 uncharacterized protein LOC103497847 isoform X28.43e-5197.87Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQV
        MASLKAVSRLSSRLQSL+PKFNKRSSSSELFS KSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQV
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQV

A0A5A7V7B3 Protein NUCLEAR FUSION DEFECTIVE 62.24e-5095.83Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVIF
        MASLKAVSRLSSRLQSL+PKFNKRSSSSELFS KSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ +F
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVIF

A0A6J1G399 uncharacterized protein LOC1114503804.10e-4489.25Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
        MASL+AVSRLSSRLQSLAPK NKRS SSEL  FKS CQSQPSAASTSR+ CTSRLP+ELSSQGSLMPLHSAIAAARLISSL+IESQGWGLVPQ
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55205.1 unknown protein1.7e-1450.53Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVI
        MAS   + RLSS++ SL  K +K  ++  + S  S  +S   +++TSR++ + RLPVELS   S++PLHSAIA+ARLISSL++ES+ WGLVPQ I
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVI

AT1G55205.2 unknown protein1.7e-1450.54Show/hide
Query:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
        MAS   + RLSS++ SL  K +K  ++  + S  S  +S   +++TSR++ + RLPVELS   S++PLHSAIA+ARLISSL++ES+ WGLVPQ
Subjt:  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ

AT3G13674.1 unknown protein5.3e-1353.68Show/hide
Query:  MASLKAVSRLSSRLQSLAPKF-NKRSSSSELFS-FKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
        MAS + + R SSRL+SL     NK ++ S L S  KS   + PS+A++ RL+ +SRLPVELS   S++PLHSAIA++RL+SSL++ES+ WGLVPQ
Subjt:  MASLKAVSRLSSRLQSLAPKF-NKRSSSSELFS-FKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGCTTTGAACCCCAATTTTCGTTACACTGCCTCAAAGCTTCACTCAGAACGAAGAAATCTCCAATGGCGTCCTTAAAAGCAGTTTCTCGGTTATCATCCCGCTTGCAATC
ACTCGCTCCAAAGTTCAACAAAAGGTCTTCATCTTCTGAGCTATTTTCATTCAAATCTACTTGTCAATCTCAGCCTTCCGCAGCTTCTACATCGCGTCTTCATTGTACTT
CGCGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTGCACAGCGCTATAGCTGCAGCTAGATTAATTTCAAGTCTGACCATTGAATCTCAAGGATGGGGT
TTGGTTCCTCAGGTTATTTTCAATGGATATCACTTGATCCTACACTCCACAGTACTAGAGAACTTAGAATTAATGGTTGTCATGACTCATGGGTCGTCTCTAAACAAGCT
TTTGGTGGGTGCAAGTGTTTGGACTATTTGGCCGGAAAGTATTCAAAGAAATGGGATTGTTGAACATTTATGTTTTCTCCACCTGCAATAG
mRNA sequenceShow/hide mRNA sequence
TGCTTTGAACCCCAATTTTCGTTACACTGCCTCAAAGCTTCACTCAGAACGAAGAAATCTCCAATGGCGTCCTTAAAAGCAGTTTCTCGGTTATCATCCCGCTTGCAATC
ACTCGCTCCAAAGTTCAACAAAAGGTCTTCATCTTCTGAGCTATTTTCATTCAAATCTACTTGTCAATCTCAGCCTTCCGCAGCTTCTACATCGCGTCTTCATTGTACTT
CGCGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTGCACAGCGCTATAGCTGCAGCTAGATTAATTTCAAGTCTGACCATTGAATCTCAAGGATGGGGT
TTGGTTCCTCAGGTTATTTTCAATGGATATCACTTGATCCTACACTCCACAGTACTAGAGAACTTAGAATTAATGGTTGTCATGACTCATGGGTCGTCTCTAAACAAGCT
TTTGGTGGGTGCAAGTGTTTGGACTATTTGGCCGGAAAGTATTCAAAGAAATGGGATTGTTGAACATTTATGTTTTCTCCACCTGCAATAG
Protein sequenceShow/hide protein sequence
CFEPQFSLHCLKASLRTKKSPMASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWG
LVPQVIFNGYHLILHSTVLENLELMVVMTHGSSLNKLLVGASVWTIWPESIQRNGIVEHLCFLHLQ