CuGenDBv2

Gene ID	Cucsat.G19783
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	binding
Genome location	ctg4:1125646..1127538
RNA-Seq Expression	Cucsat.G19783
Synteny	Cucsat.G19783
Gene Ontology terms	GO:0005634 - nucleus (cellular component) GO:0003723 - RNA binding (molecular function) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR006597 - Sel1-like repeat IPR011990 - Tetratricopeptide-like helical domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0061595.1 Sel1 domain-containing protein [Cucumis melo var. makuwa]

2.89e-193

98.19

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Query:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV
        MLR  FTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGW+ALKEVDRVIDYCELNDRRLIP LRTAKENFELALEVDNSNTHARYWLSRLHLKYHV
Subjt:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV

Query:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG
        PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFY+LEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTESV
        SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTESV
Subjt:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTESV

XP_004139315.1 uncharacterized protein LOC101222228 [Cucumis sativus]

3.83e-198

100

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Query:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV
        MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV
Subjt:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV

Query:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG
        PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTESV
        SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTESV
Subjt:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTESV

XP_008457729.1 PREDICTED: uncharacterized protein LOC103497349 [Cucumis melo]

4.80e-192

97.83

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Query:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV
        MLR  FTKRFSNPTALNFLLRFSQ RELHSRNRKAMEFIAKGW+ALKEVDRVIDYCELNDRRLIP LRTAKENFELALEVDNSNTHARYWLSRLHLKYHV
Subjt:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV

Query:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG
        PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFY+LEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTESV
        SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTESV
Subjt:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTESV

XP_022143226.1 uncharacterized protein LOC111013143 [Momordica charantia]

2.40e-176

90.18

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Query:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV
        MLR  F    S PTALNFLLRFSQ+RELHSRNRKAME IAKGW+ALKEVDRVIDYCELNDRRLIP LRTAKENFELALEVDNSNTHARYWLS+LHLKYHV
Subjt:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV

Query:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG
        PG CKA+GAALLVEAA+MGD DAQYELG RLRVENKYVQSDQQAFY+LEKAVDQLHPGALFLLGAVYLTGDCVK+DIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTES
        SLLLKGVEVPESLTKFSLKNGS TRKARKNPD  +MS +EMAREQFNAAAI+GCDLGLKWLNRLEEEE+SLSTES
Subjt:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTES

XP_038889431.1 uncharacterized protein LOC120079340 [Benincasa hispida]

6.63e-178

90.91

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Query:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV
        MLR  F KRFSN T+L+FLLRFSQ+RE+HSRNRKAME IAKGW+ALKEVDRVIDYCELNDRRLIP LRTAKENFELALEVDNSNTHARYWLS+LHLKYHV
Subjt:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV

Query:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG
        PG CKAVGAALLVEAA+MGDADAQYELGCRLRVENKYVQSDQQAFY+LEKAVDQLHPGALFLLGAVYLTGDCVK+DIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTES
        SLLLKGVEVPESLTKFSLKNGS TRKARK+PD  +M+S+EMAREQFNAAA+SGCDLGLKWLNR+EEEEKSLSTES
Subjt:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTES

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LIX6 Uncharacterized protein

1.85e-198

100

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Query:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV
        MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV
Subjt:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV

Query:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG
        PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTESV
        SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTESV
Subjt:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTESV

A0A1S3C6V2 uncharacterized protein LOC103497349

2.32e-192

97.83

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Query:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV
        MLR  FTKRFSNPTALNFLLRFSQ RELHSRNRKAMEFIAKGW+ALKEVDRVIDYCELNDRRLIP LRTAKENFELALEVDNSNTHARYWLSRLHLKYHV
Subjt:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV

Query:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG
        PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFY+LEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTESV
        SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTESV
Subjt:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTESV

A0A5A7V6X1 Sel1 domain-containing protein

1.40e-193

98.19

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Query:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV
        MLR  FTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGW+ALKEVDRVIDYCELNDRRLIP LRTAKENFELALEVDNSNTHARYWLSRLHLKYHV
Subjt:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV

Query:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG
        PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFY+LEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTESV
        SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTESV
Subjt:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTESV

A0A6J1CPM3 uncharacterized protein LOC111013143

1.16e-176

90.18

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Query:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV
        MLR  F    S PTALNFLLRFSQ+RELHSRNRKAME IAKGW+ALKEVDRVIDYCELNDRRLIP LRTAKENFELALEVDNSNTHARYWLS+LHLKYHV
Subjt:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV

Query:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG
        PG CKA+GAALLVEAA+MGD DAQYELG RLRVENKYVQSDQQAFY+LEKAVDQLHPGALFLLGAVYLTGDCVK+DIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTES
        SLLLKGVEVPESLTKFSLKNGS TRKARKNPD  +MS +EMAREQFNAAAI+GCDLGLKWLNRLEEEE+SLSTES
Subjt:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTES

A0A6J1G307 uncharacterized protein LOC111450363

1.52e-174

89.82

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Query:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV
        MLR  F KR  NPTA + LLRFSQ+RELHSRNRKAME I+KGW+ALKEVDRVIDYCELNDRRLIP LRTAKENFELALEVDNSNTHARYWLS+LHLKYHV
Subjt:  MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHV

Query:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG
        PG CKAVGAALLVEAA+MGD DAQYELGCRLRVENKYVQSDQQAFY+LEKAVDQLHPGALFLLGAVYLTGDCVK+DIASALWCFHRASEKGHAGAAIAYG
Subjt:  PGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYG

Query:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTES
        SLLLKGVEVPESLTKFSLKNGS TRKARKNPD  M SS+E AREQFNAAAISGCDLGLKWLNRLE+EE++LSTES
Subjt:  SLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTES

SwissProt top hits

e value

%identity

Alignment

A0A0H2VDN9 Secretory immunoglobulin A-binding protein EsiB

5.3e-04

30.6

Show/hide

Query:  DNSNTHARYWLSRLHLKYHVPGACKAVGAAL--LVEAAEMGDADAQYELGC---RLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKK
        +  N+  +Y+L+ L+ K    G  K    A+    ++AE GDA AQ  LG    RL  E ++    ++A  +  KA  +    A F LG   L G  VKK
Subjt:  DNSNTHARYWLSRLHLKYHVPGACKAVGAAL--LVEAAEMGDADAQYELGC---RLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKK

Query:  DIASALWCFHRASEKGHAGAAIAYGSLLLKGVEV
        D   A     +A+E+G + A +  G +   G+ V
Subjt:  DIASALWCFHRASEKGHAGAAIAYGSLLLKGVEV

P77234 Sel1-repeat-containing protein YbeQ

3.7e-05

31.73

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Query:  CKAVGAALLVEAAEMGDADAQYELGCRLRVENKY-VQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL
        C  +    ++E AE GD +AQY +G     ++      D++AFY+L+ A +Q H  A + LG  Y       KD   A++   +A+ +GH  A+ A G  
Subjt:  CKAVGAALLVEAAEMGDADAQYELGCRLRVENKY-VQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSL

Query:  LLKG
        L +G
Subjt:  LLKG

Arabidopsis top hits

e value

%identity

Alignment

AT1G18260.1 HCP-like superfamily protein

5.4e-04

Show/hide

Query:  LLVEAAEMGDADAQYELGCRLRVENKYVQSDQ-QAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLKGVEV
        +L   A+ G+A+A Y++G       + ++ D  +A ++  KAVD+  P ++ LLG +Y  G  V+++   AL     A+++G   A    G L +KG  V
Subjt:  LLVEAAEMGDADAQYELGCRLRVENKYVQSDQ-QAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLKGVEV

AT2G25570.1 binding

3.2e-113

77.08

Show/hide

Query:  FSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHVPGACKAVGAALLVEAAEMGDA
        F Q R LHSRN KAME++AKGW+A+KEV+RVIDYCELNDRRLIP LR AKENFELALE DN NTHARYWLS+LHLKYHVPGACKAVGAALLVEAA+MG+A
Subjt:  FSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHVPGACKAVGAALLVEAAEMGDA

Query:  DAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLKGVEVPESLTKFSLKNG
        DAQYELGCRLRVEN +VQSDQQAF+++E AVDQLHPGAL+LLG VYLTGDCVK+D+ SA+WCFHRASEKGHAGAAIAYGSLLL+GV+VPESLTK ++   
Subjt:  DAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLKGVEVPESLTKFSLKNG

Query:  SPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTE
        SP ++ARKN +   M+ +EMA+EQF  AA +GCDLGLKWL R+E+EEK L  E
Subjt:  SPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTE

AT2G25570.2 binding

7.9e-80

75.81

Show/hide

Query:  YWLSRLHLKYHVPGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRAS
        YWLS+LHLKYHVPGACKAVGAALLVEAA+MG+ADAQYELGCRLRVEN +VQSDQQAF+++E AVDQLHPGAL+LLG VYLTGDCVK+D+ SA+WCFHRAS
Subjt:  YWLSRLHLKYHVPGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRAS

Query:  EKGHAGAAIAYGSLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTE
        EKGHAGAAIAYGSLLL+GV+VPESLTK ++   SP ++ARKN +   M+ +EMA+EQF  AA +GCDLGLKWL R+E+EEK L  E
Subjt:  EKGHAGAAIAYGSLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTE

AT2G25570.3 binding

3.2e-113

77.08

Show/hide

Query:  FSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHVPGACKAVGAALLVEAAEMGDA
        F Q R LHSRN KAME++AKGW+A+KEV+RVIDYCELNDRRLIP LR AKENFELALE DN NTHARYWLS+LHLKYHVPGACKAVGAALLVEAA+MG+A
Subjt:  FSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHVPGACKAVGAALLVEAAEMGDA

Query:  DAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLKGVEVPESLTKFSLKNG
        DAQYELGCRLRVEN +VQSDQQAF+++E AVDQLHPGAL+LLG VYLTGDCVK+D+ SA+WCFHRASEKGHAGAAIAYGSLLL+GV+VPESLTK ++   
Subjt:  DAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLKGVEVPESLTKFSLKNG

Query:  SPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTE
        SP ++ARKN +   M+ +EMA+EQF  AA +GCDLGLKWL R+E+EEK L  E
Subjt:  SPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTCCGGCGAACGTTCACAAAGCGCTTTTCTAACCCCACAGCTCTCAATTTTCTACTCCGTTTCAGTCAACATAGGGAATTGCATAGCAGAAATCGGAAAGCTATGGA
GTTTATTGCCAAAGGATGGAATGCTTTGAAGGAAGTGGATAGAGTTATTGACTATTGTGAGCTCAATGATCGCCGTCTCATCCCCCATCTTCGGACAGCGAAGGAAAACT
TTGAATTGGCTCTTGAAGTTGATAATTCAAATACCCATGCTAGGTATTGGTTGTCAAGATTGCATTTGAAGTATCATGTCCCAGGAGCATGTAAAGCTGTAGGCGCTGCG
TTATTGGTTGAAGCAGCAGAAATGGGTGATGCGGATGCACAATATGAACTTGGTTGTCGTCTGAGAGTTGAGAATAAATATGTACAATCAGATCAACAAGCTTTCTATTT
TCTGGAGAAAGCCGTTGACCAGCTGCATCCAGGTGCACTTTTTCTTCTAGGTGCAGTATATCTGACTGGCGACTGCGTGAAAAAGGATATTGCATCAGCGCTATGGTGTT
TCCATCGTGCTTCAGAGAAGGGTCATGCTGGTGCAGCTATAGCGTATGGATCTCTTCTTCTCAAAGGTGTCGAAGTACCCGAATCCCTAACAAAATTTAGCTTAAAGAAT
GGTTCTCCAACCCGAAAAGCTAGAAAAAATCCAGATGCTTCGATGATGAGTTCAATCGAGATGGCTAGAGAACAGTTCAATGCAGCAGCCATCTCAGGGTGTGATCTTGG
GCTCAAATGGTTAAACAGACTCGAAGAGGAAGAAAAGAGTTTGTCAACCGAATCTGTTTGA

mRNA sequence

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Protein sequence

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MLRRTFTKRFSNPTALNFLLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELALEVDNSNTHARYWLSRLHLKYHVPGACKAVGAA
LLVEAAEMGDADAQYELGCRLRVENKYVQSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIAYGSLLLKGVEVPESLTKFSLKN
GSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGLKWLNRLEEEEKSLSTESV

Cucsat.G19783 (gene) of Cucumber (B10) v3 genome