; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G19906 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G19906
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationctg4:3059913..3067309
RNA-Seq ExpressionCucsat.G19906
SyntenyCucsat.G19906
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144780.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Cucumis sativus]6.36e-236100Show/hide
Query:  MATGMKLPMTVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAAPA
        MATGMKLPMTVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAAPA
Subjt:  MATGMKLPMTVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAAPA

Query:  QVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTV
        QVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTV
Subjt:  QVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTV

Query:  NVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDK
        NVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDK
Subjt:  NVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDK

Query:  ILWRGQEKIMADMASPEDWDKGAGIKVQDEF
        ILWRGQEKIMADMASPEDWDKGAGIKVQDEF
Subjt:  ILWRGQEKIMADMASPEDWDKGAGIKVQDEF

XP_008454159.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Cucumis melo]2.12e-20084.94Show/hide
Query:  MATGMKLPMTVTLQKPMAMA--APSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAA
        MA GMKLPM VTLQKPMAMA  APSSS SLHRAINFRTVSC NATS AK+P+PPINPKDPFLSKLASVASTSPETLLNRP NS+SPPYLDIFDAPRLMAA
Subjt:  MATGMKLPMTVTLQKPMAMA--APSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAA

Query:  PAQVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIH
        PAQVERS+SYNEHR RRPPPDLPSLLLHGRIVYIGMPLVPAVTEL++A++MYLQWMDPKEP+Y+YINSTGTTRDDGE + ME+EGFAIYDA+MQ KNEIH
Subjt:  PAQVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIH

Query:  TVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVI
        TV VGAA+G ACLLLAAG++GRRY MPHAKAMIQQP VPS GLMPASDV+IRAKEV+TNRDTLVKLLAKHT NSVETV+NVMK  P+YMD+  AKEFGV+
Subjt:  TVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVI

Query:  DKILWRGQEKIMADMASPEDWDKGAGIKVQDE
        DKILWRGQEKIM+ + +PEDWDKGAGIKV DE
Subjt:  DKILWRGQEKIMADMASPEDWDKGAGIKVQDE

XP_022150809.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Momordica charantia]6.56e-19983.99Show/hide
Query:  MATGMKLPMTVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAAPA
        MATGMKLPM ++LQKPMAMA+ SSS SL R  NFRTV C NATS AK+PLPPINPKDPFLSKLASVASTSPETLLNRP+NS+SPPYLD+FDAP+LMAAPA
Subjt:  MATGMKLPMTVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAAPA

Query:  QVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTV
        QVERS+SYNEHR RRPPPDLPSLLL+GRIVYIGMPLVPAVTELVIA++MYLQWMDPKEP+YLYINSTGTTRDDGE V ME+EGFAIYDA+MQ KNEIHTV
Subjt:  QVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTV

Query:  NVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDK
         VGAA+G ACLLLAAG++G+R+ MPHAKAMIQQP VPS GLMPASDV+IRAKEV+TNRDTLVKLLAKHT NS+ETV+NVM+  P+YMDS +AKEFGVIDK
Subjt:  NVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDK

Query:  ILWRGQEKIMADMASPEDWDKGAGIKVQDEF
        ILWRGQEKIMAD+A+PE+WDKGAGIKV DEF
Subjt:  ILWRGQEKIMADMASPEDWDKGAGIKVQDEF

XP_022946246.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Cucurbita moschata]1.09e-19783.99Show/hide
Query:  MATGMKLPMTVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAAPA
        MATGMKLPM V+LQKPMAMA PSSS  L R INFRT   +NATS AK+PLPPINPKDPFLSKLASVASTSPETLL+RP NS+S PYLDIFD+P+LMAAPA
Subjt:  MATGMKLPMTVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAAPA

Query:  QVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTV
        QVERS+SYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQ+MYLQWMDPKEP+Y+YINS+GTTRDDGE VAME+EGFAIYDA+MQ KNEIHT+
Subjt:  QVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTV

Query:  NVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDK
         VGAA+G ACLLLAAGTKGRR+ MPH+KAMIQQP VPS GLMPASDV+IRAKEV+TNRDTLV+LLAKHT NS+ETVAN MK  P+YMD++KAKEFGVIDK
Subjt:  NVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDK

Query:  ILWRGQEKIMADMASPEDWDKGAGIKVQDEF
        ILWRGQEKIMA++ASPEDWDKGAGIK  DE 
Subjt:  ILWRGQEKIMADMASPEDWDKGAGIKVQDEF

XP_038890491.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Benincasa hispida]2.06e-20285.5Show/hide
Query:  MATGMKLPMTVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAAPA
        MATGMKLPM VTLQKPMAMAAPSSS SL R INFRT+SC N TS AK+PLPPINPKDPFLSKLASVASTSPETLLNRP NS+SPPYLDIFDAP+LMAAPA
Subjt:  MATGMKLPMTVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAAPA

Query:  QVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTV
        QVERS+SYNEHR RRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIA++MYLQWMDPKEP+YLYINSTGTTRDDGE V ME+EGFAIYDA+MQ KNEIHTV
Subjt:  QVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTV

Query:  NVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDK
         VGAA+G ACLLLAAG++G+R+ MPHAKAMIQQP VPS GLMPASDV+IRAKEV+TNRDTLVKLLAKHT N +ETV+NVM+  P+YMD+ KAKEFGVIDK
Subjt:  NVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDK

Query:  ILWRGQEKIMADMASPEDWDKGAGIKVQDEF
        ILWRGQEKIMAD+A+PE+WDKGAGIKV DEF
Subjt:  ILWRGQEKIMADMASPEDWDKGAGIKVQDEF

TrEMBL top hitse value%identityAlignment
A0A0A0LLW4 ATP-dependent Clp protease proteolytic subunit3.08e-236100Show/hide
Query:  MATGMKLPMTVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAAPA
        MATGMKLPMTVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAAPA
Subjt:  MATGMKLPMTVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAAPA

Query:  QVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTV
        QVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTV
Subjt:  QVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTV

Query:  NVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDK
        NVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDK
Subjt:  NVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDK

Query:  ILWRGQEKIMADMASPEDWDKGAGIKVQDEF
        ILWRGQEKIMADMASPEDWDKGAGIKVQDEF
Subjt:  ILWRGQEKIMADMASPEDWDKGAGIKVQDEF

A0A1S3BXZ3 ATP-dependent Clp protease proteolytic subunit1.03e-20084.94Show/hide
Query:  MATGMKLPMTVTLQKPMAMA--APSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAA
        MA GMKLPM VTLQKPMAMA  APSSS SLHRAINFRTVSC NATS AK+P+PPINPKDPFLSKLASVASTSPETLLNRP NS+SPPYLDIFDAPRLMAA
Subjt:  MATGMKLPMTVTLQKPMAMA--APSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAA

Query:  PAQVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIH
        PAQVERS+SYNEHR RRPPPDLPSLLLHGRIVYIGMPLVPAVTEL++A++MYLQWMDPKEP+Y+YINSTGTTRDDGE + ME+EGFAIYDA+MQ KNEIH
Subjt:  PAQVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIH

Query:  TVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVI
        TV VGAA+G ACLLLAAG++GRRY MPHAKAMIQQP VPS GLMPASDV+IRAKEV+TNRDTLVKLLAKHT NSVETV+NVMK  P+YMD+  AKEFGV+
Subjt:  TVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVI

Query:  DKILWRGQEKIMADMASPEDWDKGAGIKVQDE
        DKILWRGQEKIM+ + +PEDWDKGAGIKV DE
Subjt:  DKILWRGQEKIMADMASPEDWDKGAGIKVQDE

A0A5A7U3K5 ATP-dependent Clp protease proteolytic subunit1.03e-20084.94Show/hide
Query:  MATGMKLPMTVTLQKPMAMA--APSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAA
        MA GMKLPM VTLQKPMAMA  APSSS SLHRAINFRTVSC NATS AK+P+PPINPKDPFLSKLASVASTSPETLLNRP NS+SPPYLDIFDAPRLMAA
Subjt:  MATGMKLPMTVTLQKPMAMA--APSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAA

Query:  PAQVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIH
        PAQVERS+SYNEHR RRPPPDLPSLLLHGRIVYIGMPLVPAVTEL++A++MYLQWMDPKEP+Y+YINSTGTTRDDGE + ME+EGFAIYDA+MQ KNEIH
Subjt:  PAQVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIH

Query:  TVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVI
        TV VGAA+G ACLLLAAG++GRRY MPHAKAMIQQP VPS GLMPASDV+IRAKEV+TNRDTLVKLLAKHT NSVETV+NVMK  P+YMD+  AKEFGV+
Subjt:  TVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVI

Query:  DKILWRGQEKIMADMASPEDWDKGAGIKVQDE
        DKILWRGQEKIM+ + +PEDWDKGAGIKV DE
Subjt:  DKILWRGQEKIMADMASPEDWDKGAGIKVQDE

A0A6J1D9I5 ATP-dependent Clp protease proteolytic subunit3.18e-19983.99Show/hide
Query:  MATGMKLPMTVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAAPA
        MATGMKLPM ++LQKPMAMA+ SSS SL R  NFRTV C NATS AK+PLPPINPKDPFLSKLASVASTSPETLLNRP+NS+SPPYLD+FDAP+LMAAPA
Subjt:  MATGMKLPMTVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAAPA

Query:  QVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTV
        QVERS+SYNEHR RRPPPDLPSLLL+GRIVYIGMPLVPAVTELVIA++MYLQWMDPKEP+YLYINSTGTTRDDGE V ME+EGFAIYDA+MQ KNEIHTV
Subjt:  QVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTV

Query:  NVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDK
         VGAA+G ACLLLAAG++G+R+ MPHAKAMIQQP VPS GLMPASDV+IRAKEV+TNRDTLVKLLAKHT NS+ETV+NVM+  P+YMDS +AKEFGVIDK
Subjt:  NVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDK

Query:  ILWRGQEKIMADMASPEDWDKGAGIKVQDEF
        ILWRGQEKIMAD+A+PE+WDKGAGIKV DEF
Subjt:  ILWRGQEKIMADMASPEDWDKGAGIKVQDEF

A0A6J1G379 ATP-dependent Clp protease proteolytic subunit5.26e-19883.99Show/hide
Query:  MATGMKLPMTVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAAPA
        MATGMKLPM V+LQKPMAMA PSSS  L R INFRT   +NATS AK+PLPPINPKDPFLSKLASVASTSPETLL+RP NS+S PYLDIFD+P+LMAAPA
Subjt:  MATGMKLPMTVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAAPA

Query:  QVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTV
        QVERS+SYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQ+MYLQWMDPKEP+Y+YINS+GTTRDDGE VAME+EGFAIYDA+MQ KNEIHT+
Subjt:  QVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTV

Query:  NVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDK
         VGAA+G ACLLLAAGTKGRR+ MPH+KAMIQQP VPS GLMPASDV+IRAKEV+TNRDTLV+LLAKHT NS+ETVAN MK  P+YMD++KAKEFGVIDK
Subjt:  NVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDK

Query:  ILWRGQEKIMADMASPEDWDKGAGIKVQDEF
        ILWRGQEKIMA++ASPEDWDKGAGIK  DE 
Subjt:  ILWRGQEKIMADMASPEDWDKGAGIKVQDEF

SwissProt top hitse value%identityAlignment
P74466 Putative ATP-dependent Clp protease proteolytic subunit-like5.5e-4043.06Show/hide
Query:  RSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQS
        +S  Y +   + PPPDL SLLL  RIVY+GMPL  +          VT+L+IAQ++YLQ+ DP +P+Y YINSTGT+   G+ V  E+E FAI D L   
Subjt:  RSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQS

Query:  KNEIHTVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAK
        K  +HT+ +G A+G A ++L++GTKG R S+PHA  ++ Q    + G   A+D+ IRAKEV++N+ T++++L+ +T  + E +A  M    +Y+   +AK
Subjt:  KNEIHTVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAK

Query:  EFGVIDKIL
        E+G+ID++L
Subjt:  EFGVIDKIL

Q8L770 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic1.8e-12871.34Show/hide
Query:  MTVTLQKPMAMAAP-SSSFSLHRAI--------NFRTVS-CLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAA
        M   LQ  M    P SSSFS H  +        N +T      A ++AK+P+PPINPKDPFLS LAS+A+ SPE LLNRP N++ PPYLDIFD+P+LM++
Subjt:  MTVTLQKPMAMAAP-SSSFSLHRAI--------NFRTVS-CLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAA

Query:  PAQVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIH
        PAQVERS++YNEHR R PPPDLPS+LL GRIVYIGMPLVPAVTELV+A++MYLQW+DPKEP+Y+YINSTGTTRDDGE V MESEGFAIYD+LMQ KNE+H
Subjt:  PAQVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIH

Query:  TVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVI
        TV VGAA+G ACLLL+AGTKG+R+ MPHAKAMIQQP VPS GLMPASDV+IRAKEV+TNRD LV+LL+KHT NSVETVANVM+  PYYMD+ KAKEFGVI
Subjt:  TVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVI

Query:  DKILWRGQEKIMADMASPEDWDKGAGIK
        D+ILWRGQEKI+AD+   E++DK AGIK
Subjt:  DKILWRGQEKIMADMASPEDWDKGAGIK

Q8LB10 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic1.1e-3747.09Show/hide
Query:  RPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTVNVGAAVGHACLLLA
        +PPPDL S L   RIVY+GM LVP+VTEL++A+ +YLQ+ D ++P+YLYINSTGTT+ +GE +  ++E FAIYD +   K  I T+ VG A G A LLL 
Subjt:  RPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTVNVGAAVGHACLLLA

Query:  AGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDKILW
        AG KG R ++P +  MI+QP     G   A+DV I  KE+   +  +VKL +KH   S E +   MK  P Y    +A E+G+IDK+++
Subjt:  AGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDKILW

Q9L4P4 Putative ATP-dependent Clp protease proteolytic subunit-like3.6e-3941.01Show/hide
Query:  MAAPAQVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFA
        M    Q  ++  Y +   R PPPDLPSLLL  RI+Y+GMPL  +          VTEL+IAQ++YL++ +P++P+Y YINSTGT+   G+ +  E+E FA
Subjt:  MAAPAQVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFA

Query:  IYDALMQSKNEIHTVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPY
        I D +   K  +HT+ +G A+G A ++L+ GT G R S+PHA  ++ QP   + G   ASD+ IRAKEVL N+ T++++ A++T    + +A        
Subjt:  IYDALMQSKNEIHTVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPY

Query:  YMDSVKAKEFGVIDKIL
        YM   +A E+G+ID++L
Subjt:  YMDSVKAKEFGVIDKIL

Q9XJ35 ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic2.2e-3644.21Show/hide
Query:  RSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTVNVGAAVGHACL
        R R  PPDLPSLLL  RI Y+GMP+VPAVTEL++AQ M+L + +P +P+YLYINS GT  +  E V  E+E +AI D +   K++++T+N G A G A +
Subjt:  RSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTVNVGAAVGHACL

Query:  LLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDKI
        LL+ G KG R   PH+   +  P V +     A D+ I+AKE+  N +  ++LLAK T  S E +   +K  P Y+ +  A ++G+ DKI
Subjt:  LLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDKI

Arabidopsis top hitse value%identityAlignment
AT1G09130.1 ATP-dependent caseinolytic (Clp) protease/crotonase family protein1.3e-12971.34Show/hide
Query:  MTVTLQKPMAMAAP-SSSFSLHRAI--------NFRTVS-CLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAA
        M   LQ  M    P SSSFS H  +        N +T      A ++AK+P+PPINPKDPFLS LAS+A+ SPE LLNRP N++ PPYLDIFD+P+LM++
Subjt:  MTVTLQKPMAMAAP-SSSFSLHRAI--------NFRTVS-CLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAA

Query:  PAQVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIH
        PAQVERS++YNEHR R PPPDLPS+LL GRIVYIGMPLVPAVTELV+A++MYLQW+DPKEP+Y+YINSTGTTRDDGE V MESEGFAIYD+LMQ KNE+H
Subjt:  PAQVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIH

Query:  TVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVI
        TV VGAA+G ACLLL+AGTKG+R+ MPHAKAMIQQP VPS GLMPASDV+IRAKEV+TNRD LV+LL+KHT NSVETVANVM+  PYYMD+ KAKEFGVI
Subjt:  TVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVI

Query:  DKILWRGQEKIMADMASPEDWDKGAGIK
        D+ILWRGQEKI+AD+   E++DK AGIK
Subjt:  DKILWRGQEKIMADMASPEDWDKGAGIK

AT1G09130.2 ATP-dependent caseinolytic (Clp) protease/crotonase family protein1.3e-12971.34Show/hide
Query:  MTVTLQKPMAMAAP-SSSFSLHRAI--------NFRTVS-CLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAA
        M   LQ  M    P SSSFS H  +        N +T      A ++AK+P+PPINPKDPFLS LAS+A+ SPE LLNRP N++ PPYLDIFD+P+LM++
Subjt:  MTVTLQKPMAMAAP-SSSFSLHRAI--------NFRTVS-CLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAA

Query:  PAQVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIH
        PAQVERS++YNEHR R PPPDLPS+LL GRIVYIGMPLVPAVTELV+A++MYLQW+DPKEP+Y+YINSTGTTRDDGE V MESEGFAIYD+LMQ KNE+H
Subjt:  PAQVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIH

Query:  TVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVI
        TV VGAA+G ACLLL+AGTKG+R+ MPHAKAMIQQP VPS GLMPASDV+IRAKEV+TNRD LV+LL+KHT NSVETVANVM+  PYYMD+ KAKEFGVI
Subjt:  TVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVI

Query:  DKILWRGQEKIMADMASPEDWDKGAGIK
        D+ILWRGQEKI+AD+   E++DK AGIK
Subjt:  DKILWRGQEKIMADMASPEDWDKGAGIK

AT1G09130.3 ATP-dependent caseinolytic (Clp) protease/crotonase family protein1.3e-12971.34Show/hide
Query:  MTVTLQKPMAMAAP-SSSFSLHRAI--------NFRTVS-CLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAA
        M   LQ  M    P SSSFS H  +        N +T      A ++AK+P+PPINPKDPFLS LAS+A+ SPE LLNRP N++ PPYLDIFD+P+LM++
Subjt:  MTVTLQKPMAMAAP-SSSFSLHRAI--------NFRTVS-CLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAA

Query:  PAQVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIH
        PAQVERS++YNEHR R PPPDLPS+LL GRIVYIGMPLVPAVTELV+A++MYLQW+DPKEP+Y+YINSTGTTRDDGE V MESEGFAIYD+LMQ KNE+H
Subjt:  PAQVERSISYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIH

Query:  TVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVI
        TV VGAA+G ACLLL+AGTKG+R+ MPHAKAMIQQP VPS GLMPASDV+IRAKEV+TNRD LV+LL+KHT NSVETVANVM+  PYYMD+ KAKEFGVI
Subjt:  TVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVI

Query:  DKILWRGQEKIMADMASPEDWDKGAGIK
        D+ILWRGQEKI+AD+   E++DK AGIK
Subjt:  DKILWRGQEKIMADMASPEDWDKGAGIK

AT1G49970.1 CLP protease proteolytic subunit 11.5e-3744.21Show/hide
Query:  RSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTVNVGAAVGHACL
        R R  PPDLPSLLL  RI Y+GMP+VPAVTEL++AQ M+L + +P +P+YLYINS GT  +  E V  E+E +AI D +   K++++T+N G A G A +
Subjt:  RSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTVNVGAAVGHACL

Query:  LLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDKI
        LL+ G KG R   PH+   +  P V +     A D+ I+AKE+  N +  ++LLAK T  S E +   +K  P Y+ +  A ++G+ DKI
Subjt:  LLAAGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDKI

AT4G17040.1 CLP protease R subunit 48.1e-3947.09Show/hide
Query:  RPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTVNVGAAVGHACLLLA
        +PPPDL S L   RIVY+GM LVP+VTEL++A+ +YLQ+ D ++P+YLYINSTGTT+ +GE +  ++E FAIYD +   K  I T+ VG A G A LLL 
Subjt:  RPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTVNVGAAVGHACLLLA

Query:  AGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDKILW
        AG KG R ++P +  MI+QP     G   A+DV I  KE+   +  +VKL +KH   S E +   MK  P Y    +A E+G+IDK+++
Subjt:  AGTKGRRYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDKILW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTGGGATGAAGCTCCCCATGACCGTTACCTTGCAGAAGCCCATGGCTATGGCGGCTCCATCTTCCTCGTTTTCTCTCCATAGAGCCATCAATTTCAGGACTGT
TTCCTGCTTAAACGCTACAAGCAATGCTAAAGTTCCTTTGCCTCCAATTAACCCCAAGGATCCATTTCTTTCGAAGCTCGCTTCAGTAGCTTCAACCTCACCTGAAACGT
TGCTAAACCGCCCTGCAAATTCCGAGTCTCCTCCTTATTTGGATATTTTTGATGCTCCTCGCCTTATGGCTGCACCTGCCCAAGTCGAAAGATCAATTTCCTATAATGAA
CATAGGTCGAGGAGGCCGCCGCCGGACTTGCCGTCTCTGTTACTTCATGGAAGAATTGTTTACATCGGAATGCCTTTGGTTCCAGCTGTTACAGAGCTAGTTATTGCTCA
AATAATGTACTTGCAATGGATGGATCCAAAAGAACCAATGTATCTTTACATAAACTCCACAGGGACAACTCGTGATGATGGCGAAGTGGTTGCGATGGAGTCAGAGGGTT
TTGCTATCTATGATGCTCTGATGCAGTCAAAAAATGAGATACACACAGTAAATGTTGGAGCTGCCGTAGGTCATGCTTGTTTATTACTTGCTGCAGGAACTAAAGGCAGA
CGTTATTCGATGCCACATGCCAAAGCGATGATACAGCAGCCCAGTGTCCCTTCATATGGTTTGATGCCTGCTAGTGACGTTATAATTCGTGCAAAAGAGGTGCTAACAAA
CAGGGACACATTAGTGAAACTCCTAGCAAAGCACACTGAAAATTCAGTAGAGACAGTAGCAAATGTGATGAAAGGAGGACCGTACTACATGGACTCAGTAAAGGCCAAAG
AATTTGGAGTTATTGACAAGATTCTTTGGCGCGGTCAGGAGAAGATTATGGCTGATATGGCTTCCCCGGAGGATTGGGACAAAGGAGCTGGCATCAAAGTTCAAGATGAA
TTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTGGGATGAAGCTCCCCATGACCGTTACCTTGCAGAAGCCCATGGCTATGGCGGCTCCATCTTCCTCGTTTTCTCTCCATAGAGCCATCAATTTCAGGACTGT
TTCCTGCTTAAACGCTACAAGCAATGCTAAAGTTCCTTTGCCTCCAATTAACCCCAAGGATCCATTTCTTTCGAAGCTCGCTTCAGTAGCTTCAACCTCACCTGAAACGT
TGCTAAACCGCCCTGCAAATTCCGAGTCTCCTCCTTATTTGGATATTTTTGATGCTCCTCGCCTTATGGCTGCACCTGCCCAAGTCGAAAGATCAATTTCCTATAATGAA
CATAGGTCGAGGAGGCCGCCGCCGGACTTGCCGTCTCTGTTACTTCATGGAAGAATTGTTTACATCGGAATGCCTTTGGTTCCAGCTGTTACAGAGCTAGTTATTGCTCA
AATAATGTACTTGCAATGGATGGATCCAAAAGAACCAATGTATCTTTACATAAACTCCACAGGGACAACTCGTGATGATGGCGAAGTGGTTGCGATGGAGTCAGAGGGTT
TTGCTATCTATGATGCTCTGATGCAGTCAAAAAATGAGATACACACAGTAAATGTTGGAGCTGCCGTAGGTCATGCTTGTTTATTACTTGCTGCAGGAACTAAAGGCAGA
CGTTATTCGATGCCACATGCCAAAGCGATGATACAGCAGCCCAGTGTCCCTTCATATGGTTTGATGCCTGCTAGTGACGTTATAATTCGTGCAAAAGAGGTGCTAACAAA
CAGGGACACATTAGTGAAACTCCTAGCAAAGCACACTGAAAATTCAGTAGAGACAGTAGCAAATGTGATGAAAGGAGGACCGTACTACATGGACTCAGTAAAGGCCAAAG
AATTTGGAGTTATTGACAAGATTCTTTGGCGCGGTCAGGAGAAGATTATGGCTGATATGGCTTCCCCGGAGGATTGGGACAAAGGAGCTGGCATCAAAGTTCAAGATGAA
TTCTAA
Protein sequenceShow/hide protein sequence
MATGMKLPMTVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAAPAQVERSISYNE
HRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAMESEGFAIYDALMQSKNEIHTVNVGAAVGHACLLLAAGTKGR
RYSMPHAKAMIQQPSVPSYGLMPASDVIIRAKEVLTNRDTLVKLLAKHTENSVETVANVMKGGPYYMDSVKAKEFGVIDKILWRGQEKIMADMASPEDWDKGAGIKVQDE
F