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Cucsat.G19967 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G19967
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationctg4:4173882..4175459
RNA-Seq ExpressionCucsat.G19967
SyntenyCucsat.G19967
Gene Ontology termsGO:0005488 - binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KYP33371.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]7.43e-2257.3Show/hide
Query:  YLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKL
        YLKG +EFGIFY++GGD  L+         DLDDRK+TS  V  +  ++    SKKQP+VSLST + EFI+A  CACQAIWLKRVL KL
Subjt:  YLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKL

KYP36253.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]1.30e-2157.3Show/hide
Query:  YLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKL
        YLKG +EFGIFY++GGD  L+       + DLDDRK+TS  V  +  ++    SKKQ +VSLSTT+ EFI+A  CACQAIWLKRVL KL
Subjt:  YLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKL

PKA55902.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Apostasia shenzhenica]6.23e-2351.96Show/hide
Query:  HRYALHWCFGYLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKLS
        H  A    F YLKG ++FGIFYK GGD  L+       + D+DDRK+TS  V  M   +    SKKQP+V+LSTT+ EF+AAT CACQAIWL++VL  L 
Subjt:  HRYALHWCFGYLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKLS

Query:  WK
        +K
Subjt:  WK

XP_024171543.1 uncharacterized mitochondrial protein AtMg00810-like [Rosa chinensis]5.25e-2252.53Show/hide
Query:  HRYALHWCFGYLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKL
        H+ A+   F YLKG +E GIFYKRGG+E LV         DL DRK+TS  +  +   +    SKKQPVV+LSTT+ EFIAAT CACQ++W++R+L KL
Subjt:  HRYALHWCFGYLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKL

XP_042952269.1 uncharacterized mitochondrial protein AtMg00810-like [Carya illinoinensis]4.15e-2259.55Show/hide
Query:  YLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKL
        YL+G  +FGIFY++GGD+ LV       + DL+DRK+TS  V  +   +    SKKQPVVSLSTTK EFIAAT CACQA+WLKRVL KL
Subjt:  YLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKL

TrEMBL top hitse value%identityAlignment
A0A151QSS6 Retrovirus-related Pol polyprotein from transposon TNT 1-943.60e-2257.3Show/hide
Query:  YLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKL
        YLKG +EFGIFY++GGD  L+         DLDDRK+TS  V  +  ++    SKKQP+VSLST + EFI+A  CACQAIWLKRVL KL
Subjt:  YLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKL

A0A151R160 Retrovirus-related Pol polyprotein from transposon TNT 1-946.28e-2257.3Show/hide
Query:  YLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKL
        YLKG +EFGIFY++GGD  L+       + DLDDRK+TS  V  +  ++    SKKQ +VSLSTT+ EFI+A  CACQAIWLKRVL KL
Subjt:  YLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKL

A0A2I0AK16 Retrovirus-related Pol polyprotein from transposon TNT 1-943.02e-2351.96Show/hide
Query:  HRYALHWCFGYLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKLS
        H  A    F YLKG ++FGIFYK GGD  L+       + D+DDRK+TS  V  M   +    SKKQP+V+LSTT+ EF+AAT CACQAIWL++VL  L 
Subjt:  HRYALHWCFGYLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKLS

Query:  WK
        +K
Subjt:  WK

A0A438IRX8 Retrovirus-related Pol polyprotein from transposon TNT 1-941.28e-2156.67Show/hide
Query:  YLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKLS
        YLKG +EFGIFYK+GGD+ L        + +L+D K+TS  V  +        S+KQPVVSLSTT+ EFI A  CACQAIWLKRVL KLS
Subjt:  YLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKLS

A0A5N5ICZ4 Reverse transcriptase Ty1/copia-type domain-containing protein9.30e-2257.78Show/hide
Query:  YLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFS-KKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKL
        YLKG ++ GIFYK+GG ++L        + D+DDRK+TS CV  MF S ++++S KKQPVVSLSTT+ E+IAA  CACQ +WL+RVLAKL
Subjt:  YLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFS-KKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKL

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.5e-0434Show/hide
Query:  HRYALHWCFGYLKGKSEFGIFYKRGGDERLVPTQT-MTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKL
        H  A+ W   YL+G +   + +  GG + ++   T   M+ D+D+RK+++  + +    +    SK Q  V+LSTT+ E+IAAT    + IWLKR L +L
Subjt:  HRYALHWCFGYLKGKSEFGIFYKRGGDERLVPTQT-MTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCATGTTCGCCATCGCTATGCTCTCCATTGGTGTTTTGGGTACTTGAAGGGTAAATCTGAATTTGGAATTTTCTACAAGAGAGGAGGAGATGAAAGACTTGTGCC
TACACAGACAATGACTATGTCGAAGGACTTGGATGACAGGAAAAACACTTCAGAATGTGTTTCTTCTATGTTCAAGAGTAGTAGCCTGACATTTTCTAAGAAGCAGCCAG
TGGTGAGTTTATCCACTACAAAAGTCGAATTCATTGCTGCTACATTATGTGCATGTCAAGCAATATGGTTGAAAAGGGTTTTGGCAAAGTTGAGTTGGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCATGTTCGCCATCGCTATGCTCTCCATTGGTGTTTTGGGTACTTGAAGGGTAAATCTGAATTTGGAATTTTCTACAAGAGAGGAGGAGATGAAAGACTTGTGCC
TACACAGACAATGACTATGTCGAAGGACTTGGATGACAGGAAAAACACTTCAGAATGTGTTTCTTCTATGTTCAAGAGTAGTAGCCTGACATTTTCTAAGAAGCAGCCAG
TGGTGAGTTTATCCACTACAAAAGTCGAATTCATTGCTGCTACATTATGTGCATGTCAAGCAATATGGTTGAAAAGGGTTTTGGCAAAGTTGAGTTGGAAGTAA
Protein sequenceShow/hide protein sequence
MSHVRHRYALHWCFGYLKGKSEFGIFYKRGGDERLVPTQTMTMSKDLDDRKNTSECVSSMFKSSSLTFSKKQPVVSLSTTKVEFIAATLCACQAIWLKRVLAKLSWK