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Cucsat.G2022 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G2022
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationctg1002:5590375..5593442
RNA-Seq ExpressionCucsat.G2022
SyntenyCucsat.G2022
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134688.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus]1.45e-55100Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPE
        MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPE
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPE
XP_004134690.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X5 [Cucumis sativus]1.28e-55100Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPE
        MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPE
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPE
XP_004134691.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X4 [Cucumis sativus]1.56e-56100Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEG
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEG
XP_004134692.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X3 [Cucumis sativus]1.28e-55100Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPE
        MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPE
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPE
XP_011658221.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus]1.77e-56100Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEG
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEG
TrEMBL top hitse value%identityAlignment
A0A0A0KHP8 Uncharacterized protein5.86e-5593.33Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEGIFLL
        MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPE    L
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEGIFLL

Query:  LLPDF
         L  F
Subjt:  LLPDF
A0A6J1CL53 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.21e-4786.46Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        MS+AAAMAARSA RST+ARA ISGR T  AK KSA SPF +PKQNPLSQSHRILRSPVE+SCC+ESLLPYHSATASALLTSMLSVSRRSYGWTPEG
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEG
A0A6J1CMX8 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X41.07e-4786.46Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        MS+AAAMAARSA RST+ARA ISGR T  AK KSA SPF +PKQNPLSQSHRILRSPVE+SCC+ESLLPYHSATASALLTSMLSVSRRSYGWTPEG
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEG
A0A6J1EK64 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.50e-4882.69Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEGIFLL
        MSSAAAMAARSAFRSTLARA IS R T+ AK KS  SPF+IPKQNPLSQSHRILRSPVE+SCC+ESLLPYHSATASALLTSMLSVSRRSYGWT EG +  
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEGIFLL

Query:  LLPD
        L+P+
Subjt:  LLPD
A0A6J1IM12 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.50e-4882.69Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEGIFLL
        MSSAAAMAARSAFRSTLARA IS R T+ AK KS  SPF+IPKQNPLSQSHRILRSPVE+SCC+ESLLPYHSATASALLTSMLSVSRRSYGWT EG +  
Subjt:  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEGIFLL

Query:  LLPD
        L+P+
Subjt:  LLPD
SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial1.0e-1154.26Show/hide
Query:  SSAAAMAARSAFRSTLAR--APISGRFTSSAKTKSAPSPF-AIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGW
        +SA    ARS  R+  +R  A  +GRF S A  KSAP  F A  +++PL      LR+PVELS C+ESLLPYHSATASAL+TS LS+S ++YGW
Subjt:  SSAAAMAARSAFRSTLAR--APISGRFTSSAKTKSAPSPF-AIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGW
Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein1.7e-1758.06Show/hide
Query:  AARSAFRSTLARAPISG-RFTSSAK--TKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEGI
        AARS FRS  +RA  +  RF++  K    SA + F +PKQ+PL  ++RI RSPVELSCC+E++LPYH+ATASALL SMLSVSRR  GW  +G+
Subjt:  AARSAFRSTLARAPISG-RFTSSAK--TKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEGI
AT1G28395.2 unknown protein1.7e-1758.06Show/hide
Query:  AARSAFRSTLARAPISG-RFTSSAK--TKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEGI
        AARS FRS  +RA  +  RF++  K    SA + F +PKQ+PL  ++RI RSPVELSCC+E++LPYH+ATASALL SMLSVSRR  GW  +G+
Subjt:  AARSAFRSTLARAPISG-RFTSSAK--TKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEGI
AT1G28395.3 unknown protein1.7e-1758.06Show/hide
Query:  AARSAFRSTLARAPISG-RFTSSAK--TKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEGI
        AARS FRS  +RA  +  RF++  K    SA + F +PKQ+PL  ++RI RSPVELSCC+E++LPYH+ATASALL SMLSVSRR  GW  +G+
Subjt:  AARSAFRSTLARAPISG-RFTSSAK--TKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEGI
AT2G33847.1 unknown protein2.0e-1861.63Show/hide
Query:  AARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWT
        AARS FRS + RA ++   ++     SA S F +PKQ+PL  SHRI RSPVELSCC+E++LPYH+ATASALL SMLSVS RS  WT
Subjt:  AARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWT
AT2G33847.2 unknown protein5.2e-1960.67Show/hide
Query:  AARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        AARS FRS + RA ++   ++     SA S F +PKQ+PL  SHRI RSPVELSCC+E++LPYH+ATASALL SMLSVS RS  WT +G
Subjt:  AARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCTTCAGATCGACCCTAGCCCGAGCACCTATCTCCGGCAGGTTTACCAGCAGTGCCAAAACGAAATCAGCTCCATC
TCCGTTTGCCATCCCTAAGCAGAACCCACTCTCCCAATCCCATCGCATTTTGAGGTCACCTGTTGAGTTGAGTTGCTGTCTGGAATCCTTGCTTCCTTACCACTCTGCTA
CTGCTTCTGCATTGCTTACTTCTATGCTTTCCGTCTCTCGTCGAAGCTACGGTTGGACTCCTGAAGGTATTTTCCTCCTCTTATTGCCGGATTTCTCTACGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCTTCAGATCGACCCTAGCCCGAGCACCTATCTCCGGCAGGTTTACCAGCAGTGCCAAAACGAAATCAGCTCCATC
TCCGTTTGCCATCCCTAAGCAGAACCCACTCTCCCAATCCCATCGCATTTTGAGGTCACCTGTTGAGTTGAGTTGCTGTCTGGAATCCTTGCTTCCTTACCACTCTGCTA
CTGCTTCTGCATTGCTTACTTCTATGCTTTCCGTCTCTCGTCGAAGCTACGGTTGGACTCCTGAAGGTATTTTCCTCCTCTTATTGCCGGATTTCTCTACGAATTGA
Protein sequenceShow/hide protein sequence
MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVELSCCLESLLPYHSATASALLTSMLSVSRRSYGWTPEGIFLLLLPDFSTN