; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G20253 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G20253
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptiontranscription factor IBH1-like 1
Genome locationctg47:361513..362576
RNA-Seq ExpressionCucsat.G20253
SyntenyCucsat.G20253
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035130.1 transcription factor IBH1-like [Cucumis melo var. makuwa]2.54e-9797.45Show/hide
Query:  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA
        MTV ERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSC VANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA
Subjt:  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA

Query:  RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
        RRLVQ+RTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA+AYNPSSSS
Subjt:  RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS

TYJ95949.1 transcription factor IBH1-like [Cucumis melo var. makuwa]1.53e-9898.73Show/hide
Query:  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA
        MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSC VANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA
Subjt:  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA

Query:  RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
        RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA+AYNPSSSS
Subjt:  RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS

XP_004149880.1 transcription factor IBH1-like 1 [Cucumis sativus]1.65e-122100Show/hide
Query:  MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWS
        MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWS
Subjt:  MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWS

Query:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
        SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
Subjt:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS

XP_008443801.1 PREDICTED: uncharacterized protein LOC103487305 [Cucumis melo]4.35e-11896.76Show/hide
Query:  MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWS
        MQN NSLKQEF KKWMMGLQIYTTTNENMTV ERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSC VANGVLGRGLCERVKQISNLKITRSSWS
Subjt:  MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWS

Query:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
        SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQ+RTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA+AYNPSSSS
Subjt:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS

XP_038879866.1 transcription factor IBH1-like 1 [Benincasa hispida]2.35e-9383.07Show/hide
Query:  MQNSNSLKQEFFKKWMMGLQIYTTT-NENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSW
        M+N +SLK+EF KKWM GLQIYTT+ NENMTV ERKTAIKLSADIALASSRNCATRWSRAVIA SSVDNRS  VA+GVLGR +CERVKQISN K+TRSSW
Subjt:  MQNSNSLKQEFFKKWMMGLQIYTTT-NENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSW

Query:  SSGKIVKRSRRVWRRRRRRNKCM---AAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
        SSG I+KRSRRV   RRRRNKCM   AA ++A+RLV KRTKVLRGLVPGGEFMDEISLIEETLDY+SALQAQVDVMR LATAYNPSSSS
Subjt:  SSGKIVKRSRRVWRRRRRRNKCM---AAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS

TrEMBL top hitse value%identityAlignment
A0A0A0LWQ3 Uncharacterized protein7.99e-123100Show/hide
Query:  MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWS
        MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWS
Subjt:  MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWS

Query:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
        SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
Subjt:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS

A0A1S3B8V1 uncharacterized protein LOC1034873052.11e-11896.76Show/hide
Query:  MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWS
        MQN NSLKQEF KKWMMGLQIYTTTNENMTV ERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSC VANGVLGRGLCERVKQISNLKITRSSWS
Subjt:  MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWS

Query:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
        SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQ+RTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA+AYNPSSSS
Subjt:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS

A0A5A7SVT7 Transcription factor IBH1-like1.23e-9797.45Show/hide
Query:  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA
        MTV ERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSC VANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA
Subjt:  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA

Query:  RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
        RRLVQ+RTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA+AYNPSSSS
Subjt:  RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS

A0A5D3BAB1 Transcription factor IBH1-like7.41e-9998.73Show/hide
Query:  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA
        MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSC VANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA
Subjt:  MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIA

Query:  RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS
        RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLA+AYNPSSSS
Subjt:  RRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS

A0A6J1JMR3 transcription factor IBH1-like 11.38e-7975.42Show/hide
Query:  MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWS
        M+N +SLK++F KKW+MGLQIYTTTN NMTV +RK AIKLSADIALASSRNCATRWSRAVIA +SV + S  VANG+LGR +CER+KQ S+ KITRSSWS
Subjt:  MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWS

Query:  SGKIVKRSRRVWRRRRRRNKCM--AAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLAT
        SGKI+KRSRRV RR+    KC   AA  IARRLVQKRT+ LRGLVPGGEFMDE+SLIEETLDY+ ALQ QVDVMR LAT
Subjt:  SGKIVKRSRRVWRRRRRRNKCM--AAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLAT

SwissProt top hitse value%identityAlignment
Q9M0B9 Transcription factor IBH1-like 15.1e-2743.02Show/hide
Query:  MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWS
        MQ ++S+ +EF KKW MGLQI+  + +N +V ERK AIKLSAD+A+AS R   T WSRA+I +++ ++   F+   +L  G+  + + + N K+ + +  
Subjt:  MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWS

Query:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLATA
          KIV+RS+++ RR+ +     AA   A+RLV++RT+ LR +VPGGE M +++ L++ETLDY+ +LQ QV+VMR +  A
Subjt:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLATA

Q9SKX1 Transcription factor IBH12.7e-0437.23Show/hide
Query:  SNLKITRSSWSSGKIVKRSRRVWR--RRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNP
        S   + R+     KIV+ SRR W+   +RRR+   A V      V++  + LR LVPGG  M+   L+EET  Y+  L  QV VM+ L    +P
Subjt:  SNLKITRSSWSSGKIVKRSRRVWR--RRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNP

Arabidopsis top hitse value%identityAlignment
AT2G43060.1 ILI1 binding bHLH 11.9e-0537.23Show/hide
Query:  SNLKITRSSWSSGKIVKRSRRVWR--RRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNP
        S   + R+     KIV+ SRR W+   +RRR+   A V      V++  + LR LVPGG  M+   L+EET  Y+  L  QV VM+ L    +P
Subjt:  SNLKITRSSWSSGKIVKRSRRVWR--RRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNP

AT4G30410.1 sequence-specific DNA binding transcription factors3.6e-2843.02Show/hide
Query:  MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWS
        MQ ++S+ +EF KKW MGLQI+  + +N +V ERK AIKLSAD+A+AS R   T WSRA+I +++ ++   F+   +L  G+  + + + N K+ + +  
Subjt:  MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWS

Query:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLATA
          KIV+RS+++ RR+ +     AA   A+RLV++RT+ LR +VPGGE M +++ L++ETLDY+ +LQ QV+VMR +  A
Subjt:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLATA

AT4G30410.2 sequence-specific DNA binding transcription factors3.6e-2843.02Show/hide
Query:  MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWS
        MQ ++S+ +EF KKW MGLQI+  + +N +V ERK AIKLSAD+A+AS R   T WSRA+I +++ ++   F+   +L  G+  + + + N K+ + +  
Subjt:  MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWS

Query:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLATA
          KIV+RS+++ RR+ +     AA   A+RLV++RT+ LR +VPGGE M +++ L++ETLDY+ +LQ QV+VMR +  A
Subjt:  SGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFM-DEISLIEETLDYMSALQAQVDVMRFLATA

AT5G57780.1 EXPRESSED IN: 18 plant structures5.2e-1940.88Show/hide
Query:  MQNSNSLKQEFFKKWMMGLQIYTTTNEN-MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSW
        M   N +KQEF KKW+  L +  ++ E+ + VTERK AI+LS+D+A+A++RN +T WSRA+I+RS   N++   AN  + R                   
Subjt:  MQNSNSLKQEFFKKWMMGLQIYTTTNEN-MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSW

Query:  SSGKIVKRSRRVWRRR---RRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEIS-LIEETLDYMSALQAQVDVMRFLA
           +I+K++R   + R    RRN    A T     V+KRT +L+ LVPGGE +D+   LI ETLDY+  L+AQVDVMR +A
Subjt:  SSGKIVKRSRRVWRRR---RRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEIS-LIEETLDYMSALQAQVDVMRFLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAACTCCAATTCGTTAAAACAAGAATTTTTTAAGAAATGGATGATGGGTCTTCAAATATACACAACCACCAACGAAAACATGACGGTCACAGAGCGAAAAACAGC
CATTAAATTATCTGCTGACATAGCTTTAGCATCCTCTCGAAACTGCGCCACCCGGTGGAGTCGAGCGGTTATTGCTCGCTCCTCCGTCGATAACCGAAGCTGTTTTGTGG
CTAACGGCGTACTGGGTCGTGGTCTATGCGAGAGAGTGAAGCAAATCAGCAATTTGAAAATCACGCGAAGTTCATGGAGTAGTGGGAAGATTGTGAAAAGAAGCCGTCGT
GTGTGGCGGCGGCGGAGGCGGAGGAATAAATGTATGGCGGCGGTGACGATTGCAAGAAGATTAGTGCAAAAAAGAACAAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGA
ATTTATGGATGAAATTTCGTTGATTGAAGAAACCCTAGATTATATGTCAGCTCTTCAAGCTCAAGTTGATGTAATGAGGTTTCTTGCAACTGCATATAATCCATCATCAT
CATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAACTCCAATTCGTTAAAACAAGAATTTTTTAAGAAATGGATGATGGGTCTTCAAATATACACAACCACCAACGAAAACATGACGGTCACAGAGCGAAAAACAGC
CATTAAATTATCTGCTGACATAGCTTTAGCATCCTCTCGAAACTGCGCCACCCGGTGGAGTCGAGCGGTTATTGCTCGCTCCTCCGTCGATAACCGAAGCTGTTTTGTGG
CTAACGGCGTACTGGGTCGTGGTCTATGCGAGAGAGTGAAGCAAATCAGCAATTTGAAAATCACGCGAAGTTCATGGAGTAGTGGGAAGATTGTGAAAAGAAGCCGTCGT
GTGTGGCGGCGGCGGAGGCGGAGGAATAAATGTATGGCGGCGGTGACGATTGCAAGAAGATTAGTGCAAAAAAGAACAAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGA
ATTTATGGATGAAATTTCGTTGATTGAAGAAACCCTAGATTATATGTCAGCTCTTCAAGCTCAAGTTGATGTAATGAGGTTTCTTGCAACTGCATATAATCCATCATCAT
CATCATGA
Protein sequenceShow/hide protein sequence
MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRR
VWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLATAYNPSSSS