; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G20682 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G20682
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionla-related protein 6B-like
Genome locationctg62:43203..48141
RNA-Seq ExpressionCucsat.G20682
SyntenyCucsat.G20682
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0005634 - nucleus (cellular component)
GO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR002344 - Lupus La protein
IPR006630 - La-type HTH domain
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041938.1 la-related protein 6B isoform X2 [Cucumis melo var. makuwa]5.61e-20399.01Show/hide
Query:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN
        MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTR DLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVS+QN
Subjt:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN

Query:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
        HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPL+ESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
Subjt:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY

Query:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
        VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
Subjt:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS

Query:  ST
        ST
Subjt:  ST

XP_008447184.1 PREDICTED: la-related protein 6B isoform X1 [Cucumis melo]1.35e-20199.01Show/hide
Query:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN
        MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTR DLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVS+QN
Subjt:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN

Query:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
        HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPL+ESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
Subjt:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY

Query:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
        VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
Subjt:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS

Query:  ST
        ST
Subjt:  ST

XP_008447186.1 PREDICTED: la-related protein 6B isoform X2 [Cucumis melo]1.38e-20299.01Show/hide
Query:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN
        MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTR DLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVS+QN
Subjt:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN

Query:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
        HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPL+ESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
Subjt:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY

Query:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
        VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
Subjt:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS

Query:  ST
        ST
Subjt:  ST

XP_008447187.1 PREDICTED: la-related protein 6B isoform X3 [Cucumis melo]5.61e-20399.01Show/hide
Query:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN
        MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTR DLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVS+QN
Subjt:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN

Query:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
        HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPL+ESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
Subjt:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY

Query:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
        VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
Subjt:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS

Query:  ST
        ST
Subjt:  ST

XP_031744248.1 la-related protein 6B isoform X2 [Cucumis sativus]4.07e-203100Show/hide
Query:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN
        MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN
Subjt:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN

Query:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
        HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
Subjt:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY

Query:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
        VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
Subjt:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS

Query:  ST
        ST
Subjt:  ST

TrEMBL top hitse value%identityAlignment
A0A0A0K7B6 Lupus la ribonucleoprotein3.28e-205100Show/hide
Query:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN
        MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN
Subjt:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN

Query:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
        HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
Subjt:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY

Query:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
        VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
Subjt:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS

Query:  ST
        ST
Subjt:  ST

A0A1S3BGU3 la-related protein 6B isoform X16.54e-20299.01Show/hide
Query:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN
        MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTR DLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVS+QN
Subjt:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN

Query:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
        HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPL+ESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
Subjt:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY

Query:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
        VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
Subjt:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS

Query:  ST
        ST
Subjt:  ST

A0A1S3BHG3 la-related protein 6B isoform X26.69e-20399.01Show/hide
Query:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN
        MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTR DLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVS+QN
Subjt:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN

Query:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
        HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPL+ESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
Subjt:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY

Query:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
        VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
Subjt:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS

Query:  ST
        ST
Subjt:  ST

A0A1S3BHP7 la-related protein 6B isoform X32.71e-20399.01Show/hide
Query:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN
        MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTR DLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVS+QN
Subjt:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN

Query:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
        HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPL+ESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
Subjt:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY

Query:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
        VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
Subjt:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS

Query:  ST
        ST
Subjt:  ST

A0A5A7TGF6 La-related protein 6B isoform X22.71e-20399.01Show/hide
Query:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN
        MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTR DLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVS+QN
Subjt:  MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN

Query:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
        HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPL+ESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY
Subjt:  HPYHPHHRHHHHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGY

Query:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
        VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS
Subjt:  VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGAS

Query:  ST
        ST
Subjt:  ST

SwissProt top hitse value%identityAlignment
O80567 La-related protein 6B2.2e-6754.17Show/hide
Query:  SSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN-HPY
        S+SS SD SL R+ SLSRLNA APEFVP R +         PP  Q PR++I   PPPPP  M+H Y   P   PF+ P+   PVP+  H+V +QN HP+
Subjt:  SSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN-HPY

Query:  HPHHRHHHHSHHVPVLYHP-HNPQYYADNGGFHDPDTPVV---------------QPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTD
        H  H+HHHH+ H    Y P  N   Y   GG      P +               +  Q     +  +  S++ L ++  QK++NQVEYYFSDLNLATTD
Subjt:  HPHHRHHHHSHHVPVLYHP-HNPQYYADNGGFHDPDTPVV---------------QPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTD

Query:  HLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNI
        HLMRF+ KDP+GYVPI VVASFKKIKA+IN++ QLA +L+NS+KL VSEDGKKV+R  P +ES +EELQSRI++AENLPEDHC+QNLMKIFS VGSVKNI
Subjt:  HLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNI

Query:  RTCQPQISDSGA
        RTCQPQ + SGA
Subjt:  RTCQPQISDSGA

Q5XI01 La-related protein 71.3e-1132.39Show/hide
Query:  QKPLVESDYAAPSRSKLTDEVSQKLLN---QVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVK
        QK + ES        K    V Q L +   QV+++F D NL     L   + K  DGYV IS++ SF K+K L      +A  L++SS + +  +G +++
Subjt:  QKPLVESDYAAPSRSKLTDEVSQKLLN---QVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVK

Query:  RKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSV
        RK+P  E   +E + R V  E LP++  H  + ++F   G+V
Subjt:  RKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSV

Q93ZV7 La protein 14.4e-1233.33Show/hide
Query:  LTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVASFKKIKALI------------NSHFQLANILRNSSKLLVSEDGKKVKRKQPF--
        LT+E ++ +L QVE+YFSD NL   D L + V +  DG V ++++ SF K++  +            ++   +A+ LR SS L +S+DGKKV R      
Subjt:  LTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVASFKKIKALI------------NSHFQLANILRNSSKLLVSEDGKKVKRKQPF--

Query:  SESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIR
         E  +E+L +R V A     D   +++   FS  G V ++R
Subjt:  SESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIR

Q94A38 La-related protein 6A3.0e-2444.19Show/hide
Query:  DEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAE
        DE++QK++ QVEYYFSD NL T   L+  + ++  G+VPIS +A+F K+K L   H  + + L+ SS L+VS D KKVKR  P  E  + + +   V+ E
Subjt:  DEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAE

Query:  NLPEDHCHQNLMKIFSAVGSVKNIRTCQP
        NLPEDH ++N+ +IF   GS+K++  C P
Subjt:  NLPEDHCHQNLMKIFSAVGSVKNIRTCQP

Q9LHL3 La-related protein 6C4.0e-3748.48Show/hide
Query:  HDPDTP--VVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLANILRNSSKL
        HDP     +  PA +     + ++ S++ L+D++  K++ QVEY F+D++L   + + + ++KDP+GYVP+S +AS KKIKAL ++H  ++  LR+SSKL
Subjt:  HDPDTP--VVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLANILRNSSKL

Query:  LVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDS
        +VSEDGKKVKR   F++ D EELQ R V+AENLP+DH +QNL KIF  VG+VK IR C P  S+S
Subjt:  LVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDS

Arabidopsis top hitse value%identityAlignment
AT2G43970.1 RNA-binding protein1.5e-6854.17Show/hide
Query:  SSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN-HPY
        S+SS SD SL R+ SLSRLNA APEFVP R +         PP  Q PR++I   PPPPP  M+H Y   P   PF+ P+   PVP+  H+V +QN HP+
Subjt:  SSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN-HPY

Query:  HPHHRHHHHSHHVPVLYHP-HNPQYYADNGGFHDPDTPVV---------------QPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTD
        H  H+HHHH+ H    Y P  N   Y   GG      P +               +  Q     +  +  S++ L ++  QK++NQVEYYFSDLNLATTD
Subjt:  HPHHRHHHHSHHVPVLYHP-HNPQYYADNGGFHDPDTPVV---------------QPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTD

Query:  HLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNI
        HLMRF+ KDP+GYVPI VVASFKKIKA+IN++ QLA +L+NS+KL VSEDGKKV+R  P +ES +EELQSRI++AENLPEDHC+QNLMKIFS VGSVKNI
Subjt:  HLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNI

Query:  RTCQPQISDSGA
        RTCQPQ + SGA
Subjt:  RTCQPQISDSGA

AT2G43970.2 RNA-binding protein1.5e-6854.17Show/hide
Query:  SSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN-HPY
        S+SS SD SL R+ SLSRLNA APEFVP R +         PP  Q PR++I   PPPPP  M+H Y   P   PF+ P+   PVP+  H+V +QN HP+
Subjt:  SSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQN-HPY

Query:  HPHHRHHHHSHHVPVLYHP-HNPQYYADNGGFHDPDTPVV---------------QPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTD
        H  H+HHHH+ H    Y P  N   Y   GG      P +               +  Q     +  +  S++ L ++  QK++NQVEYYFSDLNLATTD
Subjt:  HPHHRHHHHSHHVPVLYHP-HNPQYYADNGGFHDPDTPVV---------------QPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTD

Query:  HLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNI
        HLMRF+ KDP+GYVPI VVASFKKIKA+IN++ QLA +L+NS+KL VSEDGKKV+R  P +ES +EELQSRI++AENLPEDHC+QNLMKIFS VGSVKNI
Subjt:  HLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNI

Query:  RTCQPQISDSGA
        RTCQPQ + SGA
Subjt:  RTCQPQISDSGA

AT3G19090.1 RNA-binding protein2.8e-3848.48Show/hide
Query:  HDPDTP--VVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLANILRNSSKL
        HDP     +  PA +     + ++ S++ L+D++  K++ QVEY F+D++L   + + + ++KDP+GYVP+S +AS KKIKAL ++H  ++  LR+SSKL
Subjt:  HDPDTP--VVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLANILRNSSKL

Query:  LVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDS
        +VSEDGKKVKR   F++ D EELQ R V+AENLP+DH +QNL KIF  VG+VK IR C P  S+S
Subjt:  LVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDS

AT5G46250.1 RNA-binding protein2.1e-2544.19Show/hide
Query:  DEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAE
        DE++QK++ QVEYYFSD NL T   L+  + ++  G+VPIS +A+F K+K L   H  + + L+ SS L+VS D KKVKR  P  E  + + +   V+ E
Subjt:  DEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAE

Query:  NLPEDHCHQNLMKIFSAVGSVKNIRTCQP
        NLPEDH ++N+ +IF   GS+K++  C P
Subjt:  NLPEDHCHQNLMKIFSAVGSVKNIRTCQP

AT5G46250.2 RNA-binding protein2.1e-2544.19Show/hide
Query:  DEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAE
        DE++QK++ QVEYYFSD NL T   L+  + ++  G+VPIS +A+F K+K L   H  + + L+ SS L+VS D KKVKR  P  E  + + +   V+ E
Subjt:  DEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAE

Query:  NLPEDHCHQNLMKIFSAVGSVKNIRTCQP
        NLPEDH ++N+ +IF   GS+K++  C P
Subjt:  NLPEDHCHQNLMKIFSAVGSVKNIRTCQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACAACATTCTTCCTCTTCCCAATCCGATCTATCTCTTTCTCGCAACTCTTCTCTCAGTCGTCTCAACGCTCAGGCTCCTGAGTTCGTCCCCACTCGTCCCTCCAC
TCGTTCCGATCTACAACCACTGCCTCCTCCACCCAAGCAATCTCCACGTATTCTCATCCCTTCTCCTCCTCCTCCTCCTCCTCCGGCTATGATGCATGGTTATCCTCCCC
CTCCTCCTGGATCTCCCTTCCATGTTCCCATTCAGACCACCCCTGTCCCTGTCCCCACTCATGTCGTTTCCATTCAGAATCATCCCTATCACCCTCATCATCGTCACCAC
CATCATTCTCATCACGTTCCTGTGCTCTATCACCCTCATAATCCTCAGTATTATGCGGACAATGGCGGTTTTCATGACCCCGACACGCCGGTTGTGCAGCCAGCTCAGAA
GCCTCTGGTTGAGTCCGACTACGCTGCTCCATCTAGGAGTAAACTCACCGATGAAGTCTCCCAAAAGCTTTTGAATCAGGTGGAGTATTATTTCAGTGATTTAAACTTGG
CGACTACTGATCATTTGATGAGGTTCGTCAATAAAGATCCCGATGGATATGTTCCTATATCGGTTGTTGCATCATTCAAGAAGATTAAGGCTCTCATTAATAGTCACTTT
CAGCTAGCCAATATTTTGAGGAACTCTTCTAAGCTTTTGGTAAGTGAAGACGGAAAGAAAGTCAAACGTAAGCAACCATTTTCTGAGTCAGATATGGAGGAGCTGCAATC
TCGTATAGTAATTGCGGAGAACTTACCTGAGGATCATTGCCACCAAAACCTCATGAAGATATTTTCTGCTGTTGGGAGTGTTAAGAATATTCGAACTTGTCAACCTCAAA
TCTCAGATAGTGGAGCTTCTTCAACA
mRNA sequenceShow/hide mRNA sequence
ATGGCACAACATTCTTCCTCTTCCCAATCCGATCTATCTCTTTCTCGCAACTCTTCTCTCAGTCGTCTCAACGCTCAGGCTCCTGAGTTCGTCCCCACTCGTCCCTCCAC
TCGTTCCGATCTACAACCACTGCCTCCTCCACCCAAGCAATCTCCACGTATTCTCATCCCTTCTCCTCCTCCTCCTCCTCCTCCGGCTATGATGCATGGTTATCCTCCCC
CTCCTCCTGGATCTCCCTTCCATGTTCCCATTCAGACCACCCCTGTCCCTGTCCCCACTCATGTCGTTTCCATTCAGAATCATCCCTATCACCCTCATCATCGTCACCAC
CATCATTCTCATCACGTTCCTGTGCTCTATCACCCTCATAATCCTCAGTATTATGCGGACAATGGCGGTTTTCATGACCCCGACACGCCGGTTGTGCAGCCAGCTCAGAA
GCCTCTGGTTGAGTCCGACTACGCTGCTCCATCTAGGAGTAAACTCACCGATGAAGTCTCCCAAAAGCTTTTGAATCAGGTGGAGTATTATTTCAGTGATTTAAACTTGG
CGACTACTGATCATTTGATGAGGTTCGTCAATAAAGATCCCGATGGATATGTTCCTATATCGGTTGTTGCATCATTCAAGAAGATTAAGGCTCTCATTAATAGTCACTTT
CAGCTAGCCAATATTTTGAGGAACTCTTCTAAGCTTTTGGTAAGTGAAGACGGAAAGAAAGTCAAACGTAAGCAACCATTTTCTGAGTCAGATATGGAGGAGCTGCAATC
TCGTATAGTAATTGCGGAGAACTTACCTGAGGATCATTGCCACCAAAACCTCATGAAGATATTTTCTGCTGTTGGGAGTGTTAAGAATATTCGAACTTGTCAACCTCAAA
TCTCAGATAGTGGAGCTTCTTCAACA
Protein sequenceShow/hide protein sequence
MAQHSSSSQSDLSLSRNSSLSRLNAQAPEFVPTRPSTRSDLQPLPPPPKQSPRILIPSPPPPPPPAMMHGYPPPPPGSPFHVPIQTTPVPVPTHVVSIQNHPYHPHHRHH
HHSHHVPVLYHPHNPQYYADNGGFHDPDTPVVQPAQKPLVESDYAAPSRSKLTDEVSQKLLNQVEYYFSDLNLATTDHLMRFVNKDPDGYVPISVVASFKKIKALINSHF
QLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASST