; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G20912 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G20912
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionCold regulated protein 27
Genome locationctg907:182594..185270
RNA-Seq ExpressionCucsat.G20912
SyntenyCucsat.G20912
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649861.1 hypothetical protein Csa_012756 [Cucumis sativus]2.78e-16499.58Show/hide
Query:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
        MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
Subjt:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ

Query:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNN
        SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKN VCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNN
Subjt:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNN

Query:  KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQ
        KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQ
Subjt:  KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQ

XP_008452552.1 PREDICTED: uncharacterized protein LOC103493542 [Cucumis melo]1.34e-13991.96Show/hide
Query:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
        MELLP NLD+LN RE R+DSLVSEFVKD STEF RPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCP+KDNSSRTKLLSKSQ
Subjt:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ

Query:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNN
        SASH HS FGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHF+AARKNKN  CKSQAIGSRGRNSLSL AANNSGPIRAS+SDLSQQYIS+N
Subjt:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNN

Query:  KEVSDQNFVDEVIEVEKGSIDCNA
        KEVSDQNFVDEV+EVEKGS DCNA
Subjt:  KEVSDQNFVDEVIEVEKGSIDCNA

XP_011654107.2 cold-regulated protein 27 [Cucumis sativus]4.72e-19698.25Show/hide
Query:  KNTASLSLSLLFNISPTGPLPSFFPSSLSRHCKSGDNPSSSSPFMELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTD
        ++  SLSLSLLFNISPTGPLPSFFPSSLSRHCKSGDNPSSSSPFMELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTD
Subjt:  KNTASLSLSLLFNISPTGPLPSFFPSSLSRHCKSGDNPSSSSPFMELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTD

Query:  EKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKN
        EKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKN
Subjt:  EKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKN

Query:  KNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVVP
        KN VCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVVP
Subjt:  KNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVVP

XP_038896198.1 cold-regulated protein 27 isoform X1 [Benincasa hispida]4.21e-13282.08Show/hide
Query:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
        MELLP NL++L   ETR+DS+VSEF KD+STEF+ P+ SSS+GTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDS HSVGSCP+K+NSSR KLL +SQ
Subjt:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ

Query:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNN
        SASH HS FGQFKVLRRGSWKNINFEPTESRSN LN+YQALSHNPWIHHFRAARKNKN  CKSQ+IGSRGRNSL  GAANNSG +RASDSDLSQQ+IS+N
Subjt:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNN

Query:  KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQV
        KEVSDQNFVDE  E EKGS DCNAKR    +TNALINDQV
Subjt:  KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQV

XP_038896200.1 cold-regulated protein 27 isoform X3 [Benincasa hispida]1.00e-13182.01Show/hide
Query:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
        MELLP NL++L   ETR+DS+VSEF KD+STEF+ P+ SSS+GTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDS HSVGSCP+K+NSSR KLL +SQ
Subjt:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ

Query:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNN
        SASH HS FGQFKVLRRGSWKNINFEPTESRSN LN+YQALSHNPWIHHFRAARKNKN  CKSQ+IGSRGRNSL  GAANNSG +RASDSDLSQQ+IS+N
Subjt:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNN

Query:  KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQ
        KEVSDQNFVDE  E EKGS DCNAKR    +TNALINDQ
Subjt:  KEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQ

TrEMBL top hitse value%identityAlignment
A0A0A0L0A2 Polyketide_cyc domain-containing protein2.00e-16299.19Show/hide
Query:  SSSSPFMELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTK
        SSSSPFMELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTK
Subjt:  SSSSPFMELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTK

Query:  LLSKSQSASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQ
        LLSKSQSASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKN VCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQ
Subjt:  LLSKSQSASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQ

Query:  QYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQV
        QYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQ+
Subjt:  QYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQV

A0A1S3BU49 uncharacterized protein LOC1034935426.48e-14091.96Show/hide
Query:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
        MELLP NLD+LN RE R+DSLVSEFVKD STEF RPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCP+KDNSSRTKLLSKSQ
Subjt:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ

Query:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNN
        SASH HS FGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHF+AARKNKN  CKSQAIGSRGRNSLSL AANNSGPIRAS+SDLSQQYIS+N
Subjt:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNN

Query:  KEVSDQNFVDEVIEVEKGSIDCNA
        KEVSDQNFVDEV+EVEKGS DCNA
Subjt:  KEVSDQNFVDEVIEVEKGSIDCNA

A0A6J1F6L8 uncharacterized protein LOC111442637 isoform X11.04e-12177.27Show/hide
Query:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
        MELLPPNL++ N  ETR DSL+SE  KD+STEF+ P+ESSS GTHMTDSVPSDWTDEKHHLFLESME SFVSQMFDS HSVGSCP K+NSS TKL  +SQ
Subjt:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ

Query:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNN
        SASH HS FGQFKVLRRGSWKNINFE TESRSN LN++QALS NPWIHHFRA RKNKN  CKSQAIGS GRN   LGAAN+S P+RA DSDLS QYIS+N
Subjt:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNN

Query:  KEVSDQNFVDEVIEVEKGSIDC-NAKRANASETNALINDQVV
        +EVSDQNFVDE  EV  GS DC NAKR N  ETNALIN+Q +
Subjt:  KEVSDQNFVDEVIEVEKGSIDC-NAKRANASETNALINDQVV

A0A6J1FBV0 uncharacterized protein LOC111442637 isoform X28.44e-12277.92Show/hide
Query:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ
        MELLPPNL++ N  ETR DSL+SE  KD+STEF+ P+ESSS GTHMTDSVPSDWTDEKHHLFLESME SFVSQMFDS HSVGSCP K+NSS TKL  +SQ
Subjt:  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQ

Query:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNN
        SASH HS FGQFKVLRRGSWKNINFE TESRSN LN++QALS NPWIHHFRA RKNKN  CKSQAIGS GRN   LGAAN+S P+RA DSDLS QYIS+N
Subjt:  SASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNN

Query:  KEVSDQNFVDEVIEVEKGSIDC-NAKRANASETNALINDQ
        +EVSDQNFVDE  EV  GS DC NAKR N  ETNALIN+Q
Subjt:  KEVSDQNFVDEVIEVEKGSIDC-NAKRANASETNALINDQ

A0A6J1J278 uncharacterized protein LOC1114811541.40e-12372.39Show/hide
Query:  SFFPSSLSRHCKSGDNPSSSSPFMELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDS
        SF   S SRHCKSGDNPSSSS FMELLPPNL++L P+ETR DSL+SE   D+STE     ESSS+GT MT+SVPSDWTDEKHHLFLESMEASFVSQMFDS
Subjt:  SFFPSSLSRHCKSGDNPSSSSPFMELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDS

Query:  GHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNAVCKSQAIGSRGRNSLSLG
         HS G+   K+NSS TKL  +SQ+ASH HS  GQFKVLR+GSWKN+NFEPTE+R N LN+YQALS NPWIHHFRAARKNKN  CKS AI SR RN L  G
Subjt:  GHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNAVCKSQAIGSRGRNSLSLG

Query:  AANNSGPIRASDSDLSQQYISNNKEVSDQNFVD---EVIEVEKGSIDCNAKRANASETNALINDQVVP
          NNSGP+RA +SDLS+ YI NNKE+SDQNFVD   EV +V KGS DCN KR   SETN LINDQVVP
Subjt:  AANNSGPIRASDSDLSQQYISNNKEVSDQNFVD---EVIEVEKGSIDCNAKRANASETNALINDQVVP

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 271.1e-1231.56Show/hide
Query:  DQSTEFSRPIE---SSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNIN
        D S++ +  +E   +SS  +   + + ++WT+EKH L+L+SMEASFV Q++   +S+G+    +N S +      +  S       QFKVL  G W+ IN
Subjt:  DQSTEFSRPIE---SSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNIN

Query:  FEPTESRSNFL---NEYQALSHNPWIHHFRAARKNKNAVC---KSQAI-GSRGRNSLSLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEK
         +  E R N     N ++ L  +PWI H++   K +  V    ++Q +  S G+  +    + +S    +S S    Q      EVSDQNFV+E I+ E 
Subjt:  FEPTESRSNFL---NEYQALSHNPWIHHFRAARKNKNAVC---KSQAI-GSRGRNSLSLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEK

Query:  GSIDCNAKRANASETNALINDQVVP
        GS   + K      + +   DQVVP
Subjt:  GSIDCNAKRANASETNALINDQVVP

Q8L983 Cold-regulated protein 281.7e-0525.79Show/hide
Query:  WTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSA-SHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRA
        WT+EKH+ +L+ +E+SFV Q++                 T+ LS+++   S+ H    QF VL+ G W+ +NF   +S     +E+              
Subjt:  WTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSA-SHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRA

Query:  ARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVVP
         R ++N++ +++   S G  ++        G +   D        + + E S QNF +E  E EKG +    +R   ++ ++L  DQVVP
Subjt:  ARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVVP

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)1.2e-0625.79Show/hide
Query:  WTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSA-SHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRA
        WT+EKH+ +L+ +E+SFV Q++                 T+ LS+++   S+ H    QF VL+ G W+ +NF   +S     +E+              
Subjt:  WTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSA-SHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRA

Query:  ARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVVP
         R ++N++ +++   S G  ++        G +   D        + + E S QNF +E  E EKG +    +R   ++ ++L  DQVVP
Subjt:  ARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVVP

AT4G33980.2 FUNCTIONS IN: molecular_function unknown1.2e-0625.79Show/hide
Query:  WTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSA-SHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRA
        WT+EKH+ +L+ +E+SFV Q++                 T+ LS+++   S+ H    QF VL+ G W+ +NF   +S     +E+              
Subjt:  WTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSA-SHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRA

Query:  ARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVVP
         R ++N++ +++   S G  ++        G +   D        + + E S QNF +E  E EKG +    +R   ++ ++L  DQVVP
Subjt:  ARKNKNAVCKSQAIGSRGRNSLSLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVVP

AT5G42900.1 cold regulated gene 277.9e-1431.56Show/hide
Query:  DQSTEFSRPIE---SSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNIN
        D S++ +  +E   +SS  +   + + ++WT+EKH L+L+SMEASFV Q++   +S+G+    +N S +      +  S       QFKVL  G W+ IN
Subjt:  DQSTEFSRPIE---SSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNIN

Query:  FEPTESRSNFL---NEYQALSHNPWIHHFRAARKNKNAVC---KSQAI-GSRGRNSLSLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEK
         +  E R N     N ++ L  +PWI H++   K +  V    ++Q +  S G+  +    + +S    +S S    Q      EVSDQNFV+E I+ E 
Subjt:  FEPTESRSNFL---NEYQALSHNPWIHHFRAARKNKNAVC---KSQAI-GSRGRNSLSLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEK

Query:  GSIDCNAKRANASETNALINDQVVP
        GS   + K      + +   DQVVP
Subjt:  GSIDCNAKRANASETNALINDQVVP

AT5G42900.2 cold regulated gene 277.9e-1431.56Show/hide
Query:  DQSTEFSRPIE---SSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNIN
        D S++ +  +E   +SS  +   + + ++WT+EKH L+L+SMEASFV Q++   +S+G+    +N S +      +  S       QFKVL  G W+ IN
Subjt:  DQSTEFSRPIE---SSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNIN

Query:  FEPTESRSNFL---NEYQALSHNPWIHHFRAARKNKNAVC---KSQAI-GSRGRNSLSLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEK
         +  E R N     N ++ L  +PWI H++   K +  V    ++Q +  S G+  +    + +S    +S S    Q      EVSDQNFV+E I+ E 
Subjt:  FEPTESRSNFL---NEYQALSHNPWIHHFRAARKNKNAVC---KSQAI-GSRGRNSLSLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEK

Query:  GSIDCNAKRANASETNALINDQVVP
        GS   + K      + +   DQVVP
Subjt:  GSIDCNAKRANASETNALINDQVVP

AT5G42900.3 cold regulated gene 279.4e-1532.74Show/hide
Query:  DQSTEFSRPIE---SSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNIN
        D S++ +  +E   +SS  +   + + ++WT+EKH L+L+SMEASFV Q++   +S+G+    +N S +      +  S       QFKVL  G W+ IN
Subjt:  DQSTEFSRPIE---SSSRGTHMTDSVPSDWTDEKHHLFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNIN

Query:  FEPTESRSNFL---NEYQALSHNPWIHHFRAARKNKNAVC---KSQAI-GSRGRNSL-SLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVE
         +  E R N     N ++ L  +PWI H++   K +  V    ++Q +  S G+  + S G+A++   + +   D  Q  IS  +EVSDQNFV+E I+ E
Subjt:  FEPTESRSNFL---NEYQALSHNPWIHHFRAARKNKNAVC---KSQAI-GSRGRNSL-SLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVE

Query:  KGSIDCNAKRANASETNALINDQVVP
         GS   + K      + +   DQVVP
Subjt:  KGSIDCNAKRANASETNALINDQVVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCTTTCGTCCCAAGAACACCGCCTCTCTCTCTCTCTCTCTCCTCTTCAATATCTCTCCCACTGGCCCGCTTCCATCTTTCTTCCCTTCATCTCTCTCTCGCCATTGCAA
ATCTGGAGATAATCCTTCTTCCTCTTCCCCATTCATGGAATTGTTGCCTCCAAATTTGGACAGTCTCAACCCTAGAGAAACTCGTGCTGACTCACTTGTTTCTGAATTCG
TCAAGGACCAGTCTACCGAGTTTTCCCGCCCGATTGAATCTTCTAGCCGGGGCACTCATATGACGGATTCTGTACCTTCTGATTGGACCGACGAGAAGCACCATTTGTTT
CTTGAATCCATGGAAGCATCATTTGTCAGCCAAATGTTTGATTCTGGGCATTCTGTTGGCTCCTGCCCCACCAAGGATAATTCTTCACGCACAAAATTGCTCAGCAAAAG
CCAGTCCGCCTCTCACGGCCATTCACAGTTTGGCCAGTTTAAGGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAACCAACTGAATCTCGATCAAATTTTTTGA
ATGAATACCAAGCTCTCTCACATAATCCTTGGATACATCACTTTAGAGCTGCTCGTAAAAACAAAAATGCCGTTTGCAAAAGTCAAGCTATCGGTTCAAGAGGAAGAAAC
TCGTTGTCATTAGGAGCAGCTAATAATTCAGGACCTATACGTGCTTCCGACTCTGATTTGTCCCAACAATATATCAGCAATAATAAAGAAGTTTCGGATCAGAACTTTGT
TGATGAAGTTATAGAAGTTGAAAAGGGAAGCATTGATTGCAATGCCAAAAGGGCCAACGCATCAGAAACAAATGCTTTGATCAATGACCAGGTTGTTCCTTAA
mRNA sequenceShow/hide mRNA sequence
TTCTTTCGTCCCAAGAACACCGCCTCTCTCTCTCTCTCTCTCCTCTTCAATATCTCTCCCACTGGCCCGCTTCCATCTTTCTTCCCTTCATCTCTCTCTCGCCATTGCAA
ATCTGGAGATAATCCTTCTTCCTCTTCCCCATTCATGGAATTGTTGCCTCCAAATTTGGACAGTCTCAACCCTAGAGAAACTCGTGCTGACTCACTTGTTTCTGAATTCG
TCAAGGACCAGTCTACCGAGTTTTCCCGCCCGATTGAATCTTCTAGCCGGGGCACTCATATGACGGATTCTGTACCTTCTGATTGGACCGACGAGAAGCACCATTTGTTT
CTTGAATCCATGGAAGCATCATTTGTCAGCCAAATGTTTGATTCTGGGCATTCTGTTGGCTCCTGCCCCACCAAGGATAATTCTTCACGCACAAAATTGCTCAGCAAAAG
CCAGTCCGCCTCTCACGGCCATTCACAGTTTGGCCAGTTTAAGGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAACCAACTGAATCTCGATCAAATTTTTTGA
ATGAATACCAAGCTCTCTCACATAATCCTTGGATACATCACTTTAGAGCTGCTCGTAAAAACAAAAATGCCGTTTGCAAAAGTCAAGCTATCGGTTCAAGAGGAAGAAAC
TCGTTGTCATTAGGAGCAGCTAATAATTCAGGACCTATACGTGCTTCCGACTCTGATTTGTCCCAACAATATATCAGCAATAATAAAGAAGTTTCGGATCAGAACTTTGT
TGATGAAGTTATAGAAGTTGAAAAGGGAAGCATTGATTGCAATGCCAAAAGGGCCAACGCATCAGAAACAAATGCTTTGATCAATGACCAGGTTGTTCCTTAA
Protein sequenceShow/hide protein sequence
FFRPKNTASLSLSLLFNISPTGPLPSFFPSSLSRHCKSGDNPSSSSPFMELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHHLF
LESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSWKNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNAVCKSQAIGSRGRN
SLSLGAANNSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQVVP