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Cucsat.G20945 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G20945
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionEmbryo defective 1273, putative
Genome locationctg907:790870..793131
RNA-Seq ExpressionCucsat.G20945
SyntenyCucsat.G20945
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064476.1 putative Embryo defective 1273 [Cucumis melo var. makuwa]5.30e-14194.17Show/hide
Query:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
        MALPASISLPSLSSTSRIILFKGKTTLNSCFPL+GGRRATLTSSVKVKMARFMDSNF+PIEIENLKEKMQ+VVPEPVKIFPWKEAEKI+VERL FMGKET
Subjt:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET

Query:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL
        LKWSLLLFFVLSS SD VASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYG GSFFILVKLIVYGFAIQA +FPLHVANGGLMQVL
Subjt:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL

Query:  WLWRNLPRERNQPNEQSLFVGQA
        WLWRNLP+ERNQPNEQS FVGQ 
Subjt:  WLWRNLPRERNQPNEQSLFVGQA

XP_004141304.1 uncharacterized protein LOC101205191 [Cucumis sativus]9.63e-153100Show/hide
Query:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
        MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
Subjt:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET

Query:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL
        LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL
Subjt:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL

Query:  WLWRNLPRERNQPNEQSLFVGQATS
        WLWRNLPRERNQPNEQSLFVGQATS
Subjt:  WLWRNLPRERNQPNEQSLFVGQATS

XP_008452688.1 PREDICTED: uncharacterized protein LOC103493634 [Cucumis melo]1.57e-14294.22Show/hide
Query:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
        MALPASISLPSLSSTSRIILFKGKTTLNSCFPL+GGRRATLTSSVKVKMARFMDSNF+PIEIENLKEKMQ+VVPEPVKIFPWKEAEKI+VERL FMGKET
Subjt:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET

Query:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL
        LKWSLLLFFVLSS SD VASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYG GSFFILVKLIVYGFAIQA +FPLHVANGGLMQVL
Subjt:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL

Query:  WLWRNLPRERNQPNEQSLFVGQATS
        WLWRNLP+ERNQPNEQS FVGQ TS
Subjt:  WLWRNLPRERNQPNEQSLFVGQATS

XP_022159733.1 uncharacterized protein LOC111026039 [Momordica charantia]4.56e-11076.11Show/hide
Query:  MALPASISLPSLSSTSRIILFKGKT-TLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKE
        MALPASI L SLS  S IIL K  +  LNSCF LH  R+A+L SS K +M++FMDSN +P++IENLKEKMQEVVPEPVK+FPWKEAEK+++ERL FMGKE
Subjt:  MALPASISLPSLSSTSRIILFKGKT-TLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKE

Query:  TLKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQV
          KWSLL+FFV SS SD VASI RNQELLIPIGLF+GVLLTDLLKEISQEVFGNSEESSFKKQL+  GS F+LVKLI YGFA QA  FPLHVANGGLMQV
Subjt:  TLKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQV

Query:  LWLWRNLPRERNQPNEQSLFVGQATS
        LWLWRN  RERN+PNEQS FV Q TS
Subjt:  LWLWRNLPRERNQPNEQSLFVGQATS

XP_038900238.1 uncharacterized protein LOC120087328 [Benincasa hispida]3.97e-12585.02Show/hide
Query:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
        MALPASISLPSLS TSRIILFK K + NSC  L+G R+ATL +S+KVKMARFMDSN +PIEIE+LKEKMQEVVPEPVKIFPWKEAEKI+VERL FMGKET
Subjt:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET

Query:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFG--NSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQ
        LKWSLLLFFVLSS SD VASIVRN+ELLIPIGLFIGVLLTDLLKEISQEVFG  NSEES FKKQLYG GSFF+LVKLI YGF IQA  FPLHVANGGLMQ
Subjt:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFG--NSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQ

Query:  VLWLWRNLPRERNQPNEQSLFVGQATS
        VLWLWRNL RERN+PNEQS FVGQ TS
Subjt:  VLWLWRNLPRERNQPNEQSLFVGQATS

TrEMBL top hitse value%identityAlignment
A0A0A0L2N8 Uncharacterized protein4.66e-153100Show/hide
Query:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
        MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
Subjt:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET

Query:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL
        LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL
Subjt:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL

Query:  WLWRNLPRERNQPNEQSLFVGQATS
        WLWRNLPRERNQPNEQSLFVGQATS
Subjt:  WLWRNLPRERNQPNEQSLFVGQATS

A0A1S3BVL5 uncharacterized protein LOC1034936347.62e-14394.22Show/hide
Query:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
        MALPASISLPSLSSTSRIILFKGKTTLNSCFPL+GGRRATLTSSVKVKMARFMDSNF+PIEIENLKEKMQ+VVPEPVKIFPWKEAEKI+VERL FMGKET
Subjt:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET

Query:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL
        LKWSLLLFFVLSS SD VASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYG GSFFILVKLIVYGFAIQA +FPLHVANGGLMQVL
Subjt:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL

Query:  WLWRNLPRERNQPNEQSLFVGQATS
        WLWRNLP+ERNQPNEQS FVGQ TS
Subjt:  WLWRNLPRERNQPNEQSLFVGQATS

A0A5A7VDP4 Putative Embryo defective 12732.57e-14194.17Show/hide
Query:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
        MALPASISLPSLSSTSRIILFKGKTTLNSCFPL+GGRRATLTSSVKVKMARFMDSNF+PIEIENLKEKMQ+VVPEPVKIFPWKEAEKI+VERL FMGKET
Subjt:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET

Query:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL
        LKWSLLLFFVLSS SD VASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYG GSFFILVKLIVYGFAIQA +FPLHVANGGLMQVL
Subjt:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL

Query:  WLWRNLPRERNQPNEQSLFVGQA
        WLWRNLP+ERNQPNEQS FVGQ 
Subjt:  WLWRNLPRERNQPNEQSLFVGQA

A0A5D3D973 Putative Embryo defective 12737.62e-14394.22Show/hide
Query:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET
        MALPASISLPSLSSTSRIILFKGKTTLNSCFPL+GGRRATLTSSVKVKMARFMDSNF+PIEIENLKEKMQ+VVPEPVKIFPWKEAEKI+VERL FMGKET
Subjt:  MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKET

Query:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL
        LKWSLLLFFVLSS SD VASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYG GSFFILVKLIVYGFAIQA +FPLHVANGGLMQVL
Subjt:  LKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVL

Query:  WLWRNLPRERNQPNEQSLFVGQATS
        WLWRNLP+ERNQPNEQS FVGQ TS
Subjt:  WLWRNLPRERNQPNEQSLFVGQATS

A0A6J1DZN6 uncharacterized protein LOC1110260392.21e-11076.11Show/hide
Query:  MALPASISLPSLSSTSRIILFKGKT-TLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKE
        MALPASI L SLS  S IIL K  +  LNSCF LH  R+A+L SS K +M++FMDSN +P++IENLKEKMQEVVPEPVK+FPWKEAEK+++ERL FMGKE
Subjt:  MALPASISLPSLSSTSRIILFKGKT-TLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKE

Query:  TLKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQV
          KWSLL+FFV SS SD VASI RNQELLIPIGLF+GVLLTDLLKEISQEVFGNSEESSFKKQL+  GS F+LVKLI YGFA QA  FPLHVANGGLMQV
Subjt:  TLKWSLLLFFVLSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQV

Query:  LWLWRNLPRERNQPNEQSLFVGQATS
        LWLWRN  RERN+PNEQS FV Q TS
Subjt:  LWLWRNLPRERNQPNEQSLFVGQATS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTGCCGGCGTCAATATCACTGCCCTCCTTATCATCCACTTCCAGGATTATACTATTCAAGGGGAAAACAACTCTTAATAGCTGCTTCCCGTTGCATGGTGGTCG
CCGAGCTACTCTTACATCTTCAGTGAAAGTAAAAATGGCACGGTTTATGGATTCTAATTTTGTGCCTATAGAGATTGAAAATTTAAAAGAGAAGATGCAGGAGGTTGTAC
CTGAACCCGTTAAAATTTTTCCTTGGAAAGAAGCAGAGAAGATAGTGGTGGAGAGACTGGCTTTTATGGGGAAGGAGACACTGAAGTGGTCTCTTCTCTTGTTCTTTGTC
CTTAGCTCATGTTCAGATATTGTAGCATCCATAGTTAGAAACCAGGAGTTACTGATCCCTATTGGTCTTTTTATTGGTGTCTTGTTGACTGATCTTTTAAAAGAGATATC
TCAAGAAGTGTTTGGCAACTCTGAGGAATCAAGCTTCAAGAAACAACTTTATGGTTTTGGTTCCTTCTTCATTCTTGTGAAGCTAATTGTTTATGGCTTTGCAATTCAAG
CACCGGTGTTTCCTCTACATGTTGCAAATGGTGGGTTAATGCAAGTTTTGTGGCTGTGGAGAAATTTACCAAGAGAAAGAAATCAACCGAATGAACAGAGCCTGTTCGTA
GGCCAAGCTACATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTGCCGGCGTCAATATCACTGCCCTCCTTATCATCCACTTCCAGGATTATACTATTCAAGGGGAAAACAACTCTTAATAGCTGCTTCCCGTTGCATGGTGGTCG
CCGAGCTACTCTTACATCTTCAGTGAAAGTAAAAATGGCACGGTTTATGGATTCTAATTTTGTGCCTATAGAGATTGAAAATTTAAAAGAGAAGATGCAGGAGGTTGTAC
CTGAACCCGTTAAAATTTTTCCTTGGAAAGAAGCAGAGAAGATAGTGGTGGAGAGACTGGCTTTTATGGGGAAGGAGACACTGAAGTGGTCTCTTCTCTTGTTCTTTGTC
CTTAGCTCATGTTCAGATATTGTAGCATCCATAGTTAGAAACCAGGAGTTACTGATCCCTATTGGTCTTTTTATTGGTGTCTTGTTGACTGATCTTTTAAAAGAGATATC
TCAAGAAGTGTTTGGCAACTCTGAGGAATCAAGCTTCAAGAAACAACTTTATGGTTTTGGTTCCTTCTTCATTCTTGTGAAGCTAATTGTTTATGGCTTTGCAATTCAAG
CACCGGTGTTTCCTCTACATGTTGCAAATGGTGGGTTAATGCAAGTTTTGTGGCTGTGGAGAAATTTACCAAGAGAAAGAAATCAACCGAATGAACAGAGCCTGTTCGTA
GGCCAAGCTACATCTTAA
Protein sequenceShow/hide protein sequence
MALPASISLPSLSSTSRIILFKGKTTLNSCFPLHGGRRATLTSSVKVKMARFMDSNFVPIEIENLKEKMQEVVPEPVKIFPWKEAEKIVVERLAFMGKETLKWSLLLFFV
LSSCSDIVASIVRNQELLIPIGLFIGVLLTDLLKEISQEVFGNSEESSFKKQLYGFGSFFILVKLIVYGFAIQAPVFPLHVANGGLMQVLWLWRNLPRERNQPNEQSLFV
GQATS