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Cucsat.G20950 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G20950
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionGrowth-regulating factor
Genome locationctg907:723208..726912
RNA-Seq ExpressionCucsat.G20950
SyntenyCucsat.G20950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064469.1 hypothetical protein E6C27_scaffold255G001840 [Cucumis melo var. makuwa]8.25e-8789.19Show/hide
Query:  NVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKT
        NVPFSWEAKPGVPKPQSQPSP+ASLFE   +MLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKT
Subjt:  NVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKT

Query:  DPFVEAYKKCRNSRS-----INGASATNGAKRPNIIRRVLFSLSRFWC
        DPFVEAYKKC NSRS     I G SATNG KRPNIIRRVLFSLSR  C
Subjt:  DPFVEAYKKCRNSRS-----INGASATNGAKRPNIIRRVLFSLSRFWC

KAF9834216.1 hypothetical protein H0E87_030917 [Populus deltoides]4.19e-0831.65Show/hide
Query:  TKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDS
        +K NVPFSWE KPGV K   Q      ++     +   P PPC S+S +   DYS  +  +P                        +SSF     K    
Subjt:  TKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDS

Query:  KKTDPFVEAYKKCRNSRSINGASATNGAK---RPNIIRR
         + DPF+ AYKKC  S  ING   ++G     RP I+++
Subjt:  KKTDPFVEAYKKCRNSRSINGASATNGAK---RPNIIRR

KAG6608406.1 hypothetical protein SDJN03_01748, partial [Cucurbita argyrosperma subsp. sororia]5.62e-6366.06Show/hide
Query:  ASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGS
        +SS P++ DFE L T+TNVPFSWEAKPGVPK QS  SP  S FE  A  LKLPSPP RSESARL  DY   I  S PR  A+SARMAK+ LWL+AYSD  
Subjt:  ASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGS

Query:  ASSFGFGCCKSDDSKKTDPFVEAYKKC-----RNSRSINGASATNGAKRPNIIRRVLFSLSRFWC
         SSFGFGCCK D  K+TDPFVEAYKKC     +N R I G SATNG KRP I RR+LFSLSR  C
Subjt:  ASSFGFGCCKSDDSKKTDPFVEAYKKC-----RNSRSINGASATNGAKRPNIIRRVLFSLSRFWC

KAG7037747.1 hypothetical protein SDJN02_01378, partial [Cucurbita argyrosperma subsp. argyrosperma]4.84e-6466.67Show/hide
Query:  ASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGS
        +SS P++ DFE L T+TNVPFSWEAKPGVPK QS  SP  S FEI A  LKLPSPP RSESARL  DY   I  S PR  A+SARMAK+ LWL+AYSD  
Subjt:  ASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGS

Query:  ASSFGFGCCKSDDSKKTDPFVEAYKKC-----RNSRSINGASATNGAKRPNIIRRVLFSLSRFWC
         SSFGFGCCK D  K+TDPFVEAYKKC     +N R I G SATNG KRP I RR+LFSLSR  C
Subjt:  ASSFGFGCCKSDDSKKTDPFVEAYKKC-----RNSRSINGASATNGAKRPNIIRRVLFSLSRFWC

XP_004141298.1 uncharacterized protein LOC101203728 [Cucumis sativus]9.23e-115100Show/hide
Query:  MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDG
        MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDG
Subjt:  MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDG

Query:  SASSFGFGCCKSDDSKKTDPFVEAYKKCRNSRSINGASATNGAKRPNIIRRVLFSLSRFWC
        SASSFGFGCCKSDDSKKTDPFVEAYKKCRNSRSINGASATNGAKRPNIIRRVLFSLSRFWC
Subjt:  SASSFGFGCCKSDDSKKTDPFVEAYKKCRNSRSINGASATNGAKRPNIIRRVLFSLSRFWC

TrEMBL top hitse value%identityAlignment
A0A0A0KZZ9 Uncharacterized protein5.27e-111100Show/hide
Query:  MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDG
        MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDG
Subjt:  MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDG

Query:  SASSFGFGCCKSDDSKKTDPFVEAYKKCRNSRSINGASATNGAKRPNIIRRVLFSLSR
        SASSFGFGCCKSDDSKKTDPFVEAYKKCRNSRSINGASATNGAKRPNIIRRVLFSLSR
Subjt:  SASSFGFGCCKSDDSKKTDPFVEAYKKCRNSRSINGASATNGAKRPNIIRRVLFSLSR

A0A2C9VZY0 Uncharacterized protein3.13e-0835.92Show/hide
Query:  KTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSK
        K NVPFSWE KPGV K  SQ      +F  EA  +KLP PPC  E+   +   +  I    P C                +   S SS   G  K    K
Subjt:  KTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSK

Query:  KTDPFVEAYKKCRNSRSINGASATNGAKRPNI-IRRVLFSLS
        + DPF+ AYK+C  S S +    T G    N+ +R+ +FSLS
Subjt:  KTDPFVEAYKKCRNSRSINGASATNGAKRPNI-IRRVLFSLS

A0A5D2RQL1 Uncharacterized protein2.44e-0732.35Show/hide
Query:  TKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLS-GDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDD
        ++ NVPFSWE KPGV K  S+ S      +I    +KLP PPC S+S R    +  G++   P + R +  R                SS   G   S D
Subjt:  TKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLS-GDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDD

Query:  SKKTDPFVEAYKKCRNSRSINGASATNGAKRPNIIR
            DPFV AY+KC    + +     N A     +R
Subjt:  SKKTDPFVEAYKKCRNSRSINGASATNGAKRPNIIR

A0A5D3D9E3 Uncharacterized protein4.00e-8789.19Show/hide
Query:  NVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKT
        NVPFSWEAKPGVPKPQSQPSP+ASLFE   +MLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKT
Subjt:  NVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKT

Query:  DPFVEAYKKCRNSRS-----INGASATNGAKRPNIIRRVLFSLSRFWC
        DPFVEAYKKC NSRS     I G SATNG KRPNIIRRVLFSLSR  C
Subjt:  DPFVEAYKKCRNSRS-----INGASATNGAKRPNIIRRVLFSLSRFWC

A0A7J9BCP7 Uncharacterized protein2.44e-0732.35Show/hide
Query:  TKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLS-GDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDD
        ++ NVPFSWE KPGV K  S+ S      +I    +KLP PPC S+S R    +  G++   P + R +  R                SS   G   S D
Subjt:  TKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLS-GDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDD

Query:  SKKTDPFVEAYKKCRNSRSINGASATNGAKRPNIIR
            DPFV AY+KC    + +     N A     +R
Subjt:  SKKTDPFVEAYKKCRNSRSINGASATNGAKRPNIIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGTTCTCGTCCAATAGAGATTGATTTCGAATTCCTTCCAACGAAAACCAACGTTCCTTTCTCTTGGGAAGCCAAGCCCGGCGTTCCGAAGCCGCAATCGCAACC
AAGCCCTACCGCAAGCTTGTTCGAAATCGAGGCAACTATGTTGAAATTGCCTTCGCCACCATGCCGATCGGAGAGTGCTAGACTTTCCGGCGACTACAGTGGGCTGATTA
CCTATTCTCCTCCACGTTGCAGGGCGGAGAGTGCGAGAATGGCGAAGGATTTTCTGTGGCTTGAAGCTTATTCCGACGGCTCTGCATCGTCTTTTGGATTCGGGTGCTGT
AAATCGGATGATTCGAAGAAGACGGATCCTTTTGTTGAAGCTTACAAGAAATGTAGGAACAGCCGGTCGATTAATGGTGCTTCCGCCACAAATGGTGCTAAACGTCCCAA
TATTATAAGAAGAGTACTTTTTTCGCTATCACGATTTTGGTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGTTCTCGTCCAATAGAGATTGATTTCGAATTCCTTCCAACGAAAACCAACGTTCCTTTCTCTTGGGAAGCCAAGCCCGGCGTTCCGAAGCCGCAATCGCAACC
AAGCCCTACCGCAAGCTTGTTCGAAATCGAGGCAACTATGTTGAAATTGCCTTCGCCACCATGCCGATCGGAGAGTGCTAGACTTTCCGGCGACTACAGTGGGCTGATTA
CCTATTCTCCTCCACGTTGCAGGGCGGAGAGTGCGAGAATGGCGAAGGATTTTCTGTGGCTTGAAGCTTATTCCGACGGCTCTGCATCGTCTTTTGGATTCGGGTGCTGT
AAATCGGATGATTCGAAGAAGACGGATCCTTTTGTTGAAGCTTACAAGAAATGTAGGAACAGCCGGTCGATTAATGGTGCTTCCGCCACAAATGGTGCTAAACGTCCCAA
TATTATAAGAAGAGTACTTTTTTCGCTATCACGATTTTGGTGCTGA
Protein sequenceShow/hide protein sequence
MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCC
KSDDSKKTDPFVEAYKKCRNSRSINGASATNGAKRPNIIRRVLFSLSRFWC