CuGenDBv2

Gene ID	Cucsat.G21024
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Ubiquitin-conjugating enzyme E2, putative
Genome location	ctg910:366359..369518
RNA-Seq Expression	Cucsat.G21024
Synteny	Cucsat.G21024
Gene Ontology terms	GO:0000209 - protein polyubiquitination (biological process) GO:0006413 - translational initiation (biological process) GO:0006511 - ubiquitin-dependent protein catabolic process (biological process) GO:0005634 - nucleus (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003743 - translation initiation factor activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016746 - transferase activity, transferring acyl groups (molecular function) GO:0016874 - ligase activity (molecular function) GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domains	IPR000608 - Ubiquitin-conjugating enzyme E2 IPR016135 - Ubiquitin-conjugating enzyme/RWD-like IPR023313 - Ubiquitin-conjugating enzyme, active site

Homology

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GenBank top hits

e value

%identity

Alignment

EEF33696.1 ubiquitin-conjugating enzyme E2, putative [Ricinus communis]

3.40e-70

89.38

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Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVWFPGIMNFIED
        K W   ++++ E+
Subjt:  KVWFPGIMNFIED

ESR58133.1 hypothetical protein CICLE_v10022714mg [Citrus clementina]

1.13e-70

98.06

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Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV+IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVW
        KVW
Subjt:  KVW

KJB39128.1 hypothetical protein B456_007G025200 [Gossypium raimondii]

5.96e-70

91.07

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Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVWFPGIMNFIE
        KV    ++  I 
Subjt:  KVWFPGIMNFIE

PIA34493.1 hypothetical protein AQUCO_03700040v1 [Aquilegia coerulea]

2.94e-70

98.08

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Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVWF
        KV F
Subjt:  KVWF

XP_022872998.1 SUMO-conjugating enzyme UBC9-like [Olea europaea var. sylvestris]

1.29e-70

97.12

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Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFL+TIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVWF
        KV+F
Subjt:  KVWF

TrEMBL top hits

e value

%identity

Alignment

A0A067H652 UBC core domain-containing protein

5.48e-71

98.06

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Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV+IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVW
        KVW
Subjt:  KVW

A0A0D2QIN6 UBC core domain-containing protein

2.88e-70

91.07

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Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVWFPGIMNFIE
        KV    ++  I 
Subjt:  KVWFPGIMNFIE

A0A2G5CT86 UBC core domain-containing protein

1.42e-70

98.08

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Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVWF
        KV F
Subjt:  KVWF

B9SRR5 Ubiquitin-conjugating enzyme E2, putative

1.65e-70

89.38

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Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVWFPGIMNFIED
        K W   ++++ E+
Subjt:  KVWFPGIMNFIED

V4TCW8 UBC core domain-containing protein

5.48e-71

98.06

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Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV+IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVW
        KVW
Subjt:  KVW

SwissProt top hits

e value

%identity

Alignment

P35131 Ubiquitin-conjugating enzyme E2 8

2.8e-54

96.08

Show/hide

Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP +SPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KV
        KV
Subjt:  KV

P35132 SUMO-conjugating enzyme UBC9

9.7e-55

97.06

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Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KV
        KV
Subjt:  KV

P35133 Ubiquitin-conjugating enzyme E2 10

1.3e-54

97.06

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Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KV
        KV
Subjt:  KV

P35135 Ubiquitin-conjugating enzyme E2-17 kDa

1.3e-54

97.06

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Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLV+IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KV
        KV
Subjt:  KV

Q94F47 Ubiquitin-conjugating enzyme E2 28

1.3e-54

96.08

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Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KV
        KV
Subjt:  KV

Arabidopsis top hits

e value

%identity

Alignment

AT1G64230.1 ubiquitin-conjugating enzyme 28

9.0e-56

96.08

Show/hide

Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KV
        KV
Subjt:  KV

AT1G64230.2 ubiquitin-conjugating enzyme 28

9.0e-56

96.08

Show/hide

Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KV
        KV
Subjt:  KV

AT4G27960.1 ubiquitin conjugating enzyme 9

6.9e-56

97.06

Show/hide

Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KV
        KV
Subjt:  KV

AT4G27960.2 ubiquitin conjugating enzyme 9

6.9e-56

97.06

Show/hide

Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KV
        KV
Subjt:  KV

AT5G53300.3 ubiquitin-conjugating enzyme 10

4.0e-56

96.15

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Query:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVWF
        KV F
Subjt:  KVWF

Sequences

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CDS sequence

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ATGGCGTCCAAGCGGATCTTGAAGGAACTCAAGGATCTGCAGAGGGATCCTCCTACGTCTTGCAGTGCTGGTCCTGTAGCTGAAGACATGTTTCACTGGCAAGCAACCAT
AATGGGACCACCAGACAGTCCCTATGCTGGTGGTGTCTTCCTTGTCACCATTCACTTCCCTCCAGACTACCCATTTAAGCCTCCCAAGGTAGCGTTCAGAACAAAGGTAT
TCCACCCAAATATAAACAGCAATGGAAGCATTTGCCTGGACATATTGAAAGAGCAATGGAGCCCTGCCCTAACCATTTCTAAGGTTTGGTTCCCTGGAATCATGAATTTC
ATTGAAGATCATAGTAAATTAGTATGTAACACATCTAACTCATTTCATGATAATATTGCCTTTGCATTCGCAATATTCATTTTTTCAGACTATATAACCCTATGGTCCAA
TCAATTTTTTTCACTAATTTACTACGAGTTTCCTTTACACCCAAATGTTGTAGAATCCGGGTTGTCGGGTGAGATTAGTCAAGGTATGCCTTGGTTTGGATACTCATAA

mRNA sequence

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Protein sequence

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MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVWFPGIMNF
IEDHSKLVCNTSNSFHDNIAFAFAIFIFSDYITLWSNQFFSLIYYEFPLHPNVVESGLSGEISQGMPWFGYS

Cucsat.G21024 (gene) of Cucumber (B10) v3 genome