; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G2112 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G2112
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptioncytochrome c6, chloroplastic
Genome locationctg1002:7192493..7195751
RNA-Seq ExpressionCucsat.G2112
SyntenyCucsat.G2112
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0005506 - iron ion binding (molecular function)
GO:0009055 - electron transfer activity (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR009056 - Cytochrome c-like domain
IPR023655 - Cytochrome c6
IPR036909 - Cytochrome c-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134523.1 cytochrome c6, chloroplastic [Cucumis sativus]4.65e-11182.41Show/hide
Query:  LSVTSHFVAPNTSPYCFPVNLSLSLSLSLSLSLSFLSLCISPRCKLRFPTQPQGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETI
        LSVTSHFVAPNTSPYCFP                                   GKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETI
Subjt:  LSVTSHFVAPNTSPYCFPVNLSLSLSLSLSLSLSFLSLCISPRCKLRFPTQPQGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETI

Query:  EIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        EIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
Subjt:  EIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

XP_008439440.1 PREDICTED: cytochrome c6, chloroplastic [Cucumis melo]5.73e-9874.87Show/hide
Query:  LSVTSHFVAPNTSPYCFPVNLSLSLSLSLSLSLSFLSLCISPRCKLRFPTQPQGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETI
        LSVTS FV P +SP+ FP+N                                 G RRT VCQIRT VKIL+ L PPLIALLLPLSPLNKT GCLVLAET 
Subjt:  LSVTSHFVAPNTSPYCFPVNLSLSLSLSLSLSLSFLSLCISPRCKLRFPTQPQGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETI

Query:  EIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        EIERGGALFNQ+CIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITY GKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
Subjt:  EIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

XP_022926876.1 cytochrome c6, chloroplastic [Cucurbita moschata]3.91e-8679.38Show/hide
Query:  ISPRCKLRFPTQPQGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNG
        +SP C   FP + Q  RRT VCQ+R QVKILK L PPLIA+L+ L PLNKT GC  LA++ EIERGGALF+ +CIGCHD GGNIIQPGATLFSSDLERNG
Subjt:  ISPRCKLRFPTQPQGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNG

Query:  ADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        AD+EEEIY+ITY GKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVKIQADRGWPNP
Subjt:  ADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

XP_023517564.1 cytochrome c6, chloroplastic [Cucurbita pepo subsp. pepo]3.21e-8578.75Show/hide
Query:  ISPRCKLRFPTQPQGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNG
        +SP C   FP + Q  RRT VCQ+R QV ILK L PPLIA+L+ L PLNKT GC  LA++ EIERGGALF+ +CIGCHD GGNIIQPGATLFSSDLERNG
Subjt:  ISPRCKLRFPTQPQGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNG

Query:  ADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        AD+EEEIY+ITY GKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVKIQADRGWPNP
Subjt:  ADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

XP_038877732.1 cytochrome c6, chloroplastic [Benincasa hispida]3.17e-9283.85Show/hide
Query:  CISPRCKLRFPTQPQGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERN
        C +P C   FP +   KRRT VCQIRTQVKIL +L PPLIA+ L LSPLN+T GCL LA+T EIERGGALFNQ+CIGCHDGGGNIIQPGATLFSSDLERN
Subjt:  CISPRCKLRFPTQPQGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERN

Query:  GADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        GADAEEEIYRITY GKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVK+QADRGWPNP
Subjt:  GADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

TrEMBL top hitse value%identityAlignment
A0A0A0KPD1 Cytochrome c domain-containing protein2.20e-103100Show/hide
Query:  GKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDG
        GKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDG
Subjt:  GKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDG

Query:  KGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        KGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
Subjt:  KGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

A0A1S3AYD3 cytochrome c6, chloroplastic2.77e-9874.87Show/hide
Query:  LSVTSHFVAPNTSPYCFPVNLSLSLSLSLSLSLSFLSLCISPRCKLRFPTQPQGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETI
        LSVTS FV P +SP+ FP+N                                 G RRT VCQIRT VKIL+ L PPLIALLLPLSPLNKT GCLVLAET 
Subjt:  LSVTSHFVAPNTSPYCFPVNLSLSLSLSLSLSLSFLSLCISPRCKLRFPTQPQGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETI

Query:  EIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        EIERGGALFNQ+CIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITY GKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
Subjt:  EIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

A0A6J1CXZ2 cytochrome c6, chloroplastic1.11e-8081.08Show/hide
Query:  QGKRRTPVCQIR-TQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITY
        +G+R T VCQ R  Q+KI K+  PPLIA+L+ LSP+ KT GCL  A+T+EIERGGALF+QSCIGCHDGGGNIIQPGATLFSSDLERNGAD EEEIY ITY
Subjt:  QGKRRTPVCQIR-TQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITY

Query:  DGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
         GKGRMPGFGENCKPRGQCTFGPRLQE+EIRLLAKFVKIQADRGW NP
Subjt:  DGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

A0A6J1EG38 cytochrome c6, chloroplastic1.89e-8679.38Show/hide
Query:  ISPRCKLRFPTQPQGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNG
        +SP C   FP + Q  RRT VCQ+R QVKILK L PPLIA+L+ L PLNKT GC  LA++ EIERGGALF+ +CIGCHD GGNIIQPGATLFSSDLERNG
Subjt:  ISPRCKLRFPTQPQGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNG

Query:  ADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        AD+EEEIY+ITY GKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVKIQADRGWPNP
Subjt:  ADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

A0A6J1KPJ4 cytochrome c6, chloroplastic1.55e-8578.75Show/hide
Query:  ISPRCKLRFPTQPQGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNG
        +SP C   F  + Q  RRT VC++R QVK LKAL PPLIA+L+ L PLNKT GC  LA++ EIERGGALF+ +CIGCHDGGGNIIQPGATLFSSDLERNG
Subjt:  ISPRCKLRFPTQPQGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNG

Query:  ADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        AD+EEEIY+ITY GKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVKIQADRGWPNP
Subjt:  ADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

SwissProt top hitse value%identityAlignment
P00110 Cytochrome c63.6e-1037.11Show/hide
Query:  EIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEI-YRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGW
        +IE G  +F  +C  CH GG N+I P  TL    LE NG +A   I Y++T +GK  MP             FG RL + +I  +A +V  Q+++GW
Subjt:  EIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEI-YRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGW

P07497 Cytochrome c62.1e-1029.46Show/hide
Query:  KILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGENCKPR
        +IL   +  L+ LL  ++P          A+  ++  GG +F+ +C  CH GG N++ P  TL  +DL++ G  + E I     +GKG MP FG      
Subjt:  KILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGENCKPR

Query:  GQCTFGPRLQEEEIRLLAKFVKIQADRGW
               +L  ++I  +A +V  Q+++GW
Subjt:  GQCTFGPRLQEEEIRLLAKFVKIQADRGW

P25935 Cytochrome c62.1e-1029.46Show/hide
Query:  KILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGENCKPR
        +IL   +  L+ LL  ++P          A+  ++  GG +F+ +C  CH GG N++ P  TL  +DL++ G  + E I     +GKG MP FG      
Subjt:  KILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGENCKPR

Query:  GQCTFGPRLQEEEIRLLAKFVKIQADRGW
               +L  ++I  +A +V  Q+++GW
Subjt:  GQCTFGPRLQEEEIRLLAKFVKIQADRGW

P46445 Cytochrome c63.9e-0934.38Show/hide
Query:  EIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGW
        ++  G A+F  +C  CH+GG N I P  TL  +DLE NG ++   I     +G G MPGF      +G      R+ + ++  +A +V  QA++GW
Subjt:  EIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGW

Q93VA3 Cytochrome c6, chloroplastic2.5e-4868.94Show/hide
Query:  ILKALVPPLIALLLPLSPLNKTSGCL---VLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGENCK
        +LK L PPL A+LL +SP+     C     L +T++I+RG  LFN++CIGCHD GGNIIQPGATLF+ DLERNG D EEEIYR+TY GKGRMPGFGE C 
Subjt:  ILKALVPPLIALLLPLSPLNKTSGCL---VLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGENCK

Query:  PRGQCTFGPRLQEEEIRLLAKFVKIQADRGWP
        PRGQCTFGPRLQ+EEI+LLA+FVK QAD+GWP
Subjt:  PRGQCTFGPRLQEEEIRLLAKFVKIQADRGWP

Arabidopsis top hitse value%identityAlignment
AT5G45040.1 Cytochrome c1.8e-4968.94Show/hide
Query:  ILKALVPPLIALLLPLSPLNKTSGCL---VLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGENCK
        +LK L PPL A+LL +SP+     C     L +T++I+RG  LFN++CIGCHD GGNIIQPGATLF+ DLERNG D EEEIYR+TY GKGRMPGFGE C 
Subjt:  ILKALVPPLIALLLPLSPLNKTSGCL---VLAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGENCK

Query:  PRGQCTFGPRLQEEEIRLLAKFVKIQADRGWP
        PRGQCTFGPRLQ+EEI+LLA+FVK QAD+GWP
Subjt:  PRGQCTFGPRLQEEEIRLLAKFVKIQADRGWP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCTCCGTAACTTCACATTTTGTTGCCCCTAACACTAGCCCTTATTGCTTCCCAGTAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTTTTATC
TCTATGTATTTCTCCCCGCTGCAAACTGAGATTTCCAACCCAACCACAGGGAAAGCGACGGACCCCAGTTTGTCAAATTCGTACACAAGTTAAGATTCTTAAAGCCTTGG
TTCCCCCTCTGATTGCGCTGCTTCTACCATTATCTCCCCTCAACAAAACCTCAGGATGTCTTGTGCTCGCCGAAACGATAGAAATAGAAAGAGGAGGTGCATTGTTTAAT
CAATCTTGCATTGGCTGCCATGACGGAGGGGGAAACATAATTCAGCCCGGTGCCACACTCTTTTCAAGTGATCTTGAAAGAAATGGAGCTGATGCCGAAGAGGAGATCTA
CCGTATAACATATGATGGGAAAGGGAGAATGCCTGGTTTTGGTGAGAACTGTAAACCAAGGGGTCAGTGCACATTTGGTCCACGTTTGCAGGAGGAAGAAATTAGGCTTT
TGGCGAAGTTTGTAAAGATACAGGCAGATCGGGGGTGGCCAAACCCATAG
mRNA sequenceShow/hide mRNA sequence
CTCTCCGTAACTTCACATTTTGTTGCCCCTAACACTAGCCCTTATTGCTTCCCAGTAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTTTTATC
TCTATGTATTTCTCCCCGCTGCAAACTGAGATTTCCAACCCAACCACAGGGAAAGCGACGGACCCCAGTTTGTCAAATTCGTACACAAGTTAAGATTCTTAAAGCCTTGG
TTCCCCCTCTGATTGCGCTGCTTCTACCATTATCTCCCCTCAACAAAACCTCAGGATGTCTTGTGCTCGCCGAAACGATAGAAATAGAAAGAGGAGGTGCATTGTTTAAT
CAATCTTGCATTGGCTGCCATGACGGAGGGGGAAACATAATTCAGCCCGGTGCCACACTCTTTTCAAGTGATCTTGAAAGAAATGGAGCTGATGCCGAAGAGGAGATCTA
CCGTATAACATATGATGGGAAAGGGAGAATGCCTGGTTTTGGTGAGAACTGTAAACCAAGGGGTCAGTGCACATTTGGTCCACGTTTGCAGGAGGAAGAAATTAGGCTTT
TGGCGAAGTTTGTAAAGATACAGGCAGATCGGGGGTGGCCAAACCCATAG
Protein sequenceShow/hide protein sequence
LSVTSHFVAPNTSPYCFPVNLSLSLSLSLSLSLSFLSLCISPRCKLRFPTQPQGKRRTPVCQIRTQVKILKALVPPLIALLLPLSPLNKTSGCLVLAETIEIERGGALFN
QSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP