; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G21253 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G21253
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionserine/arginine-rich splicing factor SR34A
Genome locationctg910:37010..39293
RNA-Seq ExpressionCucsat.G21253
SyntenyCucsat.G21253
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137780.1 serine/arginine-rich splicing factor SR34A [Momordica charantia]2.46e-65100Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGG
        GGGGGGGG
Subjt:  GGGGGGGG

XP_022974340.1 serine/arginine-rich splicing factor SR34A-like isoform X1 [Cucurbita maxima]6.28e-6498.15Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSRFSRTIYVGNLPSDIKEYEIEDLF+KYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGG
        GGGGGGGG
Subjt:  GGGGGGGG

XP_022974346.1 serine/arginine-rich splicing factor SR34A-like isoform X2 [Cucurbita maxima]4.67e-6498.15Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSRFSRTIYVGNLPSDIKEYEIEDLF+KYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGG
        GGGGGGGG
Subjt:  GGGGGGGG

XP_022974348.1 serine/arginine-rich splicing factor SR34A-like isoform X3 [Cucurbita maxima]4.53e-6498.15Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSRFSRTIYVGNLPSDIKEYEIEDLF+KYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGG
        GGGGGGGG
Subjt:  GGGGGGGG

XP_022974349.1 serine/arginine-rich splicing factor SR34A-like isoform X4 [Cucurbita maxima]6.23e-6498.13Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSRFSRTIYVGNLPSDIKEYEIEDLF+KYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGG
        GGGGGGG
Subjt:  GGGGGGG

TrEMBL top hitse value%identityAlignment
A0A0A0KLR9 Uncharacterized protein1.43e-65100Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGG
        GGGGGGGG
Subjt:  GGGGGGGG

A0A6J1C7M8 serine/arginine-rich splicing factor SR34A1.19e-65100Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGG
        GGGGGGGG
Subjt:  GGGGGGGG

A0A6J1IB38 serine/arginine-rich splicing factor SR34A-like isoform X22.26e-6498.15Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSRFSRTIYVGNLPSDIKEYEIEDLF+KYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGG
        GGGGGGGG
Subjt:  GGGGGGGG

A0A6J1IFY5 serine/arginine-rich splicing factor SR34A-like isoform X32.19e-6498.15Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSRFSRTIYVGNLPSDIKEYEIEDLF+KYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGG
        GGGGGGGG
Subjt:  GGGGGGGG

A0A6J1IHC8 serine/arginine-rich splicing factor SR34A-like isoform X43.02e-6498.13Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSRFSRTIYVGNLPSDIKEYEIEDLF+KYGRILDIELKIPPRPPCYCFVEFE+VRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGG
        GGGGGGG
Subjt:  GGGGGGG

SwissProt top hitse value%identityAlignment
A2RVS6 Serine/arginine-rich splicing factor SR34A3.5e-4483.33Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE  RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR  YGGGG 
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGG
        G GGGGGG
Subjt:  GGGGGGGG

F4JHI7 Serine/arginine-rich splicing factor SR34B5.8e-3171.3Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSR SRTIYVGNLP DI+E E+EDLF KYG ++ I+LKIPPRPP Y FVEFE  RDA+DAI  RDGY+FDG  LRVELAHGGR  SS D R SY G G 
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGG
        GG GGG G
Subjt:  GGGGGGGG

O22315 Serine/arginine-rich-splicing factor SR346.8e-3270.09Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSR SRT+YVGNLP DI+E E+EDLF KYG ++ I+LK+PPRPP Y FVEF+  RDAEDAI  RDGY+FDG RLRVELAHGGR  SS D R S+ GGG 
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGG
        GGG G G
Subjt:  GGGGGGG

Q7SXP4 Serine/arginine-rich splicing factor 1A1.7e-2262Show/hide
Query:  IYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGGGGGGGGGG
        IYVGNLP DI+  ++ED+FYKYG I DI+LK     P + FVEFE  RDAEDA+ ARDGY++DG RLRVE    GRG      R  +GGGGGGGGGGGGG
Subjt:  IYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGGGGGGGGGG

Q9XFR5 Serine/arginine-rich splicing factor SR305.6e-3474.74Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSS-DRRSS
        MSSR++RTIYVGNLP DI++ E+EDLFYKYG I+DI+LKIPPRPP Y FVEFE  RDA+DAI  RDGY+FDGCRLRVE+AHGGR  S S DR SS
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSS-DRRSS

Arabidopsis top hitse value%identityAlignment
AT1G02840.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.9e-3370.09Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSR SRT+YVGNLP DI+E E+EDLF KYG ++ I+LK+PPRPP Y FVEF+  RDAEDAI  RDGY+FDG RLRVELAHGGR  SS D R S+ GGG 
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGG
        GGG G G
Subjt:  GGGGGGG

AT1G02840.2 RNA-binding (RRM/RBD/RNP motifs) family protein4.9e-3370.09Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MSSR SRT+YVGNLP DI+E E+EDLF KYG ++ I+LK+PPRPP Y FVEF+  RDAEDAI  RDGY+FDG RLRVELAHGGR  SS D R S+ GGG 
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGG
        GGG G G
Subjt:  GGGGGGG

AT3G49430.1 SER/ARG-rich protein 34A2.5e-4583.33Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE  RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR  YGGGG 
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGG
        G GGGGGG
Subjt:  GGGGGGGG

AT3G49430.2 SER/ARG-rich protein 34A2.5e-4583.33Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE  RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR  YGGGG 
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGG
        G GGGGGG
Subjt:  GGGGGGGG

AT3G49430.3 SER/ARG-rich protein 34A2.5e-4583.33Show/hide
Query:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG
        MS RFSR+IYVGNLP DI+E+EIED+FYKYGRI+DIELK+PPRPPCYCFVEFE  RDAEDAI+ RDGYN DGCRLRVELAHGGRG SSSDRR  YGGGG 
Subjt:  MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGG

Query:  GGGGGGGG
        G GGGGGG
Subjt:  GGGGGGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGTCGTTTTTCTCGCACAATATATGTTGGAAACTTGCCCTCAGACATAAAAGAGTATGAAATTGAAGATTTGTTCTACAAGTATGGCCGAATTTTGGATATTGA
ATTGAAGATTCCACCACGCCCTCCATGTTATTGTTTTGTGGAGTTTGAGAGTGTTAGGGATGCAGAAGATGCAATCAGAGCTCGTGATGGATATAATTTTGATGGTTGTC
GTCTAAGGGTTGAGCTTGCACATGGTGGTAGGGGCCCTTCATCTAGTGATCGTCGTAGTAGTTATGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGTCGTTTTTCTCGCACAATATATGTTGGAAACTTGCCCTCAGACATAAAAGAGTATGAAATTGAAGATTTGTTCTACAAGTATGGCCGAATTTTGGATATTGA
ATTGAAGATTCCACCACGCCCTCCATGTTATTGTTTTGTGGAGTTTGAGAGTGTTAGGGATGCAGAAGATGCAATCAGAGCTCGTGATGGATATAATTTTGATGGTTGTC
GTCTAAGGGTTGAGCTTGCACATGGTGGTAGGGGCCCTTCATCTAGTGATCGTCGTAGTAGTTATGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGA
Protein sequenceShow/hide protein sequence
MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGGGGGGGGGG