; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G21345 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G21345
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description40S ribosomal protein S10-1
Genome locationctg910:1519311..1521069
RNA-Seq ExpressionCucsat.G21345
SyntenyCucsat.G21345
Gene Ontology termsGO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005326 - Plectin/S10, N-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR037447 - 40S Ribosomal protein S10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011654726.1 40S ribosomal protein S10-1 [Cucumis sativus]2.29e-126100Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

XP_016898887.1 PREDICTED: 40S ribosomal protein S10-1 [Cucumis melo]3.79e-12599.44Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRGPSRFDGERRFGDRDGYRGG RGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

XP_022928970.1 40S ribosomal protein S10-1-like [Cucurbita moschata]1.81e-12398.32Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII EKNR+EISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRG GGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

XP_023549574.1 40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo]1.81e-12398.32Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII EKNR+EISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRG GGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

XP_038907155.1 40S ribosomal protein S10-1-like [Benincasa hispida]3.79e-12599.44Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
         FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

TrEMBL top hitse value%identityAlignment
A0A0A0KK65 S10_plectin domain-containing protein1.11e-126100Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

A0A1S4DSB0 40S ribosomal protein S10-11.84e-12599.44Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRGPSRFDGERRFGDRDGYRGG RGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

A0A5A7TIX3 40S ribosomal protein S10-11.11e-126100Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

A0A6J1ESX8 40S ribosomal protein S10-1-like8.74e-12498.32Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII EKNR+EISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRG GGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

A0A6J1I4J7 40S ribosomal protein S10-1-like7.19e-12397.77Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII EKNR+EISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE
        PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRG GGDFGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGAPAPSNLE
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE

SwissProt top hitse value%identityAlignment
P0DKK8 40S ribosomal protein S10-17.0e-7479.23Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIP+KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFG-GPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDF-GDKGGAPADYRPSFGGPGGRPGFGR-GAGGYGGAPAPSNLE
        PFG GP GDRPRGP RF+G+R RFGDRDGYRGGPRG  GDF G+KGGAPA+++PSF   GGRPGFGR G GG+G  P  S++E
Subjt:  PFG-GPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDF-GDKGGAPADYRPSFGGPGGRPGFGR-GAGGYGGAPAPSNLE

P0DKK9 40S ribosomal protein S10-27.0e-7479.23Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIIP+KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFG-GPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDF-GDKGGAPADYRPSFGGPGGRPGFGR-GAGGYGGAPAPSNLE
        PFG GP GDRPRGP RF+G+R RFGDRDGYRGGPRG  GDF G+KGGAPA+++PSF   GGRPGFGR G GG+G  P  S++E
Subjt:  PFG-GPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDF-GDKGGAPADYRPSFGGPGGRPGFGR-GAGGYGGAPAPSNLE

Q9FFS8 40S ribosomal protein S10-23.6e-7079.01Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG
        MII E NR+EISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP G
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG

Query:  RPFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSF-GGPGG-RPGFGRGAGGYGGAPAPSNL
        RPFGG  GDRPRGP R DGERRFGDRDGYRGGP+  GG++GDK GAPADY+P F GG GG R GFGRGAGG+GG  A S+L
Subjt:  RPFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSF-GGPGG-RPGFGRGAGGYGGAPAPSNL

Q9LTF2 40S ribosomal protein S10-35.2e-6979.1Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII E NRKEI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS
        PFGGP GDR RGP    G+R RFGDRDGYR GPR  G   G+KGGAPADY+PSF G G   GFGRGAGGY  A APS
Subjt:  PFGGPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS

Q9SW09 40S ribosomal protein S10-11.0e-7281.36Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII E NR+EI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS
        PFGGP GDR RGP R DG+R RFGDRDGYRGGPR  GGD  +KGGAPAD++PSF G GGRPGFGRGAGGY  A APS
Subjt:  PFGGPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS

Arabidopsis top hitse value%identityAlignment
AT4G25740.1 RNA binding Plectin/S10 domain-containing protein7.2e-7481.36Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII E NR+EI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS
        PFGGP GDR RGP R DG+R RFGDRDGYRGGPR  GGD  +KGGAPAD++PSF G GGRPGFGRGAGGY  A APS
Subjt:  PFGGPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS

AT4G25740.2 RNA binding Plectin/S10 domain-containing protein8.5e-5968.75Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII E NR+EI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS
        PFGGP                              GGD  +KGGAPAD++PSF G GGRPGFGRGAGGY  A APS
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS

AT5G41520.1 RNA binding Plectin/S10 domain-containing protein2.6e-7179.01Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG
        MII E NR+EISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP G
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG

Query:  RPFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSF-GGPGG-RPGFGRGAGGYGGAPAPSNL
        RPFGG  GDRPRGP R DGERRFGDRDGYRGGP+  GG++GDK GAPADY+P F GG GG R GFGRGAGG+GG  A S+L
Subjt:  RPFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSF-GGPGG-RPGFGRGAGGYGGAPAPSNL

AT5G41520.2 RNA binding Plectin/S10 domain-containing protein3.5e-5280.74Show/hide
Query:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGA
        MQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGP R DGERRFGDRDGYRGGP+  GG++GDK GA
Subjt:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGA

Query:  PADYRPSF-GGPGG-RPGFGRGAGGYGGAPAPSNL
        PADY+P F GG GG R GFGRGAGG+GG  A S+L
Subjt:  PADYRPSF-GGPGG-RPGFGRGAGGYGGAPAPSNL

AT5G52650.1 RNA binding Plectin/S10 domain-containing protein3.7e-7079.1Show/hide
Query:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII E NRKEI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS
        PFGGP GDR RGP    G+R RFGDRDGYR GPR  G   G+KGGAPADY+PSF G G   GFGRGAGGY  A APS
Subjt:  PFGGPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATTCCAGAGAAGAATCGCAAAGAAATTTCCAAGTACCTCTTTCAAGAGGGAGTTTGCTATGCCAAGAAGGACTACAATCTGGCCAAGCACCCGGAAATCGATGT
GCCAAATTTGCAAGTGATCAAGCTGATGCAGAGCTTCAAATCTAAGGAGTACGTTCGCGAGACATTTGCCTGGATGCATTACTACTGGTACCTCACAAACGATGGCATTG
AGTTTTTGAGGACTTACCTGAATCTCCCTTCAGAAATTGTCCCGGCTACTTTGAAGAAACAAGCTAAGCCCGCTGGTCGACCATTTGGTGGCCCATCTGGAGACCGCCCA
CGTGGTCCTTCAAGATTTGATGGAGAAAGAAGATTTGGTGACCGAGATGGCTACCGTGGAGGTCCTCGTGGGCCTGGTGGTGATTTCGGTGATAAGGGTGGAGCCCCTGC
TGATTACAGACCTTCATTCGGGGGTCCTGGCGGAAGGCCTGGCTTTGGCCGTGGAGCTGGTGGCTATGGGGGAGCACCTGCACCATCAAATCTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATCATTCCAGAGAAGAATCGCAAAGAAATTTCCAAGTACCTCTTTCAAGAGGGAGTTTGCTATGCCAAGAAGGACTACAATCTGGCCAAGCACCCGGAAATCGATGT
GCCAAATTTGCAAGTGATCAAGCTGATGCAGAGCTTCAAATCTAAGGAGTACGTTCGCGAGACATTTGCCTGGATGCATTACTACTGGTACCTCACAAACGATGGCATTG
AGTTTTTGAGGACTTACCTGAATCTCCCTTCAGAAATTGTCCCGGCTACTTTGAAGAAACAAGCTAAGCCCGCTGGTCGACCATTTGGTGGCCCATCTGGAGACCGCCCA
CGTGGTCCTTCAAGATTTGATGGAGAAAGAAGATTTGGTGACCGAGATGGCTACCGTGGAGGTCCTCGTGGGCCTGGTGGTGATTTCGGTGATAAGGGTGGAGCCCCTGC
TGATTACAGACCTTCATTCGGGGGTCCTGGCGGAAGGCCTGGCTTTGGCCGTGGAGCTGGTGGCTATGGGGGAGCACCTGCACCATCAAATCTTGAATGA
Protein sequenceShow/hide protein sequence
MIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRP
RGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGAPAPSNLE