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Cucsat.G21449 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G21449
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description40S ribosomal protein S20
Genome locationctg910:3529838..3531787
RNA-Seq ExpressionCucsat.G21449
SyntenyCucsat.G21449
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4972734.1 hypothetical protein JHK87_029555 [Glycine soja]6.90e-4497.4Show/hide
Query:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        MAYAAMKPTKPGLE+ QEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
Subjt:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT

XP_004143650.1 40S ribosomal protein S20-2 [Cucumis sativus]2.87e-45100Show/hide
Query:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
Subjt:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT

XP_008439109.1 PREDICTED: 40S ribosomal protein S20-2-like [Cucumis melo]6.90e-4497.4Show/hide
Query:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        MAYAAMKPTKPGLED QEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVL+ITTRKSPCGEGT
Subjt:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT

XP_008467267.1 PREDICTED: 40S ribosomal protein S20-2 [Cucumis melo]1.65e-4498.7Show/hide
Query:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVL+ITTRKSPCGEGT
Subjt:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT

XP_039064469.1 40S ribosomal protein S20-2-like [Hibiscus syriacus]6.90e-4497.4Show/hide
Query:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        MAYAAMKPTKPGLE+AQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVL+ITTRKSPCGEGT
Subjt:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT

TrEMBL top hitse value%identityAlignment
A0A0A0KL82 Ribosomal_S10 domain-containing protein1.39e-45100Show/hide
Query:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
Subjt:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT

A0A1S4E624 40S ribosomal protein S20-27.99e-4598.7Show/hide
Query:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVL+ITTRKSPCGEGT
Subjt:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT

A0A5A7VKH9 40S ribosomal protein S20-2-like3.34e-4497.4Show/hide
Query:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        MAYAAMKPTKPGLED QEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVL+ITTRKSPCGEGT
Subjt:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT

A0A5D3DB09 40S ribosomal protein S20-27.99e-4598.7Show/hide
Query:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVL+ITTRKSPCGEGT
Subjt:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT

A0A6A3BX28 40S ribosomal protein S203.34e-4497.4Show/hide
Query:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        MAYAAMKPTKPGLE+AQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVL+ITTRKSPCGEGT
Subjt:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT

SwissProt top hitse value%identityAlignment
P23403 40S ribosomal protein S204.4e-2174.6Show/hide
Query:  DAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        D +  IH+IRITL+S+NVK+LEKVCADL+RGAK+K L+VKGPVRMPTK L ITTRK+PCGEG+
Subjt:  DAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT

P35686 40S ribosomal protein S203.0e-2576.92Show/hide
Query:  MAYA-AMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        +AYA  MK  K G E +QE  H+IRITLSSK+VKNLEKVC DLV+GAKDK L+VKGPVRMPTKVL+ITTRKSPCGEGT
Subjt:  MAYA-AMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT

P49200 40S ribosomal protein S20-13.1e-3086.84Show/hide
Query:  AYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        AY  MKP K GLE+  EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGT
Subjt:  AYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT

Q3ZBH8 40S ribosomal protein S207.6e-2167.12Show/hide
Query:  AMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        A K T     + +  IH+IRITL+S+NVK+LEKVCADL+RGAK+K L+VKGPVRMPTK L ITTRK+PCGEG+
Subjt:  AMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT

Q9STY6 40S ribosomal protein S20-23.6e-3188.31Show/hide
Query:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        MAY  MKPTK GLE   EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGT
Subjt:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT

Arabidopsis top hitse value%identityAlignment
AT3G45030.1 Ribosomal protein S10p/S20e family protein2.2e-3186.84Show/hide
Query:  AYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        AY  MKP K GLE+  EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGT
Subjt:  AYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT

AT3G47370.1 Ribosomal protein S10p/S20e family protein2.6e-3288.31Show/hide
Query:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        MAY  MKPTK GLE   EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGT
Subjt:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT

AT3G47370.2 Ribosomal protein S10p/S20e family protein2.6e-3288.31Show/hide
Query:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        MAY  MKPTK GLE   EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGT
Subjt:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT

AT3G47370.3 Ribosomal protein S10p/S20e family protein2.6e-3288.31Show/hide
Query:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        MAY  MKPTK GLE   EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGT
Subjt:  MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT

AT5G62300.1 Ribosomal protein S10p/S20e family protein2.2e-3186.84Show/hide
Query:  AYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT
        AY  MKP K GLE+  EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGT
Subjt:  AYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTATGCAGCAATGAAGCCTACGAAGCCTGGTTTGGAGGACGCACAAGAGCAGATCCACAAGATTAGGATCACTCTTTCCTCCAAGAATGTGAAGAACCTTGAAAA
GGTTTGTGCTGATTTGGTTCGGGGTGCCAAAGATAAGAGACTGAGGGTCAAAGGACCTGTGAGGATGCCAACTAAAGTCCTGAACATCACCACAAGGAAATCTCCCTGCG
GTGAAGGTACTTTTGAATCAATGCCTTATTTTAAGATTAACTGCAAACCTGGTTATGGAATCCTCCATCTGATTGTTAGTAATTGCTACCCTGGATCAATCCCTCAACTG
ATTTTTCCCCCATATCTCTCTTTCCCCATCATCCATTTGTATTTATATATTTGCAGGCATCTGCGAATATCATTGGTGTTTCTAGTCAAATATTCATGCATCATGCATCA
TGTCAAATATCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTATGCAGCAATGAAGCCTACGAAGCCTGGTTTGGAGGACGCACAAGAGCAGATCCACAAGATTAGGATCACTCTTTCCTCCAAGAATGTGAAGAACCTTGAAAA
GGTTTGTGCTGATTTGGTTCGGGGTGCCAAAGATAAGAGACTGAGGGTCAAAGGACCTGTGAGGATGCCAACTAAAGTCCTGAACATCACCACAAGGAAATCTCCCTGCG
GTGAAGGTACTTTTGAATCAATGCCTTATTTTAAGATTAACTGCAAACCTGGTTATGGAATCCTCCATCTGATTGTTAGTAATTGCTACCCTGGATCAATCCCTCAACTG
ATTTTTCCCCCATATCTCTCTTTCCCCATCATCCATTTGTATTTATATATTTGCAGGCATCTGCGAATATCATTGGTGTTTCTAGTCAAATATTCATGCATCATGCATCA
TGTCAAATATCATTGA
Protein sequenceShow/hide protein sequence
MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTFESMPYFKINCKPGYGILHLIVSNCYPGSIPQL
IFPPYLSFPIIHLYLYICRHLRISLVFLVKYSCIMHHVKYH