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Cucsat.G21451 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G21451
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionCDGSH iron-sulfur domain-containing protein NEET
Genome locationctg910:3559401..3560385
RNA-Seq ExpressionCucsat.G21451
SyntenyCucsat.G21451
Gene Ontology termsGO:0010506 - regulation of autophagy (biological process)
GO:0005741 - mitochondrial outer membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR018967 - Iron-binding zinc finger, CDGSH type
IPR042216 - MitoNEET, CDGSH iron-sulfur domain
IPR045131 - CDGSH iron-sulfur domain-containing protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143713.1 CDGSH iron-sulfur domain-containing protein NEET [Cucumis sativus]5.19e-73100Show/hide
Query:  MASILPISSPSSSLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDN
        MASILPISSPSSSLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDN
Subjt:  MASILPISSPSSSLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDN

Query:  VGPLLLKK
        VGPLLLKK
Subjt:  VGPLLLKK

XP_008467263.1 PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Cucumis melo]1.68e-6089.91Show/hide
Query:  MASILPISSPSSSLSTRPHLL-SRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGD
        MASI+ ISSPSSSLSTR  LL  R+FNDNGRRRTVVVRAEG SSGEHINPAIRKSE+KVVDSVL+ ELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGD
Subjt:  MASILPISSPSSSLSTRPHLL-SRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGD

Query:  NVGPLLLKK
        NVGPLLLKK
Subjt:  NVGPLLLKK

XP_022996357.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita maxima]4.02e-4282.76Show/hide
Query:  NFNDNG--RRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
        NF   G  RRR VVVRAEGG   E INPAIRKSEDKVVDSV+V +L+KPLTPYCRCWRS TFPLCDGSHVKHNKATGDNVGPLLLKK
Subjt:  NFNDNG--RRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK

XP_023534172.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita pepo subsp. pepo]9.88e-4376.6Show/hide
Query:  STRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
        +TRP  ++       RRR VVVRAEGG   E INPAIRKSEDKVVDSV+V +L+KPLTPYCRCWRS TFPLCDGSHVKHNKATGDNVGPLLLKK
Subjt:  STRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK

XP_038876467.1 CDGSH iron-sulfur domain-containing protein NEET [Benincasa hispida]5.02e-4877.06Show/hide
Query:  MASILPISSPSS-SLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGD
        MASI+ IS PSS S+++RP     NF  +GRR TVVVRA+G S GE INPAIRK+EDKVVDSVL+ ELSKPLTPYCRCWRS TFPLCDGSHVKHNKATGD
Subjt:  MASILPISSPSS-SLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGD

Query:  NVGPLLLKK
        NVGPLLLK+
Subjt:  NVGPLLLKK

TrEMBL top hitse value%identityAlignment
A0A0A0KL88 ZnF_CDGSH domain-containing protein2.51e-73100Show/hide
Query:  MASILPISSPSSSLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDN
        MASILPISSPSSSLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDN
Subjt:  MASILPISSPSSSLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDN

Query:  VGPLLLKK
        VGPLLLKK
Subjt:  VGPLLLKK

A0A1S3CTC1 CDGSH iron-sulfur domain-containing protein NEET8.13e-6189.91Show/hide
Query:  MASILPISSPSSSLSTRPHLL-SRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGD
        MASI+ ISSPSSSLSTR  LL  R+FNDNGRRRTVVVRAEG SSGEHINPAIRKSE+KVVDSVL+ ELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGD
Subjt:  MASILPISSPSSSLSTRPHLL-SRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGD

Query:  NVGPLLLKK
        NVGPLLLKK
Subjt:  NVGPLLLKK

A0A5A7UKN7 CDGSH iron-sulfur domain-containing protein NEET8.13e-6189.91Show/hide
Query:  MASILPISSPSSSLSTRPHLL-SRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGD
        MASI+ ISSPSSSLSTR  LL  R+FNDNGRRRTVVVRAEG SSGEHINPAIRKSE+KVVDSVL+ ELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGD
Subjt:  MASILPISSPSSSLSTRPHLL-SRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGD

Query:  NVGPLLLKK
        NVGPLLLKK
Subjt:  NVGPLLLKK

A0A6J1K1P5 CDGSH iron-sulfur domain-containing protein NEET1.95e-4282.76Show/hide
Query:  NFNDNG--RRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
        NF   G  RRR VVVRAEGG   E INPAIRKSEDKVVDSV+V +L+KPLTPYCRCWRS TFPLCDGSHVKHNKATGDNVGPLLLKK
Subjt:  NFNDNG--RRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK

W9S1F7 CDGSH iron-sulfur domain-containing protein 2A4.24e-4277.78Show/hide
Query:  HLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
        H  + NF     RR VVVRAEG    + INP IRKSE+KVVDSV+V ELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
Subjt:  HLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK

SwissProt top hitse value%identityAlignment
C1BI29 CDGSH iron-sulfur domain-containing protein 2A1.8e-1658.06Show/hide
Query:  INPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
        IN  I+K   KVV+ + + +L++    YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+LKK
Subjt:  INPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK

Q6AZG1 CDGSH iron-sulfur domain-containing protein 2B1.8e-1659.68Show/hide
Query:  INPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
        IN  I+K   KVV+ + + +L      YCRCWRS TFP+CDGSH KHN+ TGDNVGPL+LKK
Subjt:  INPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK

Q6PCF8 CDGSH iron-sulfur domain-containing protein 2A1.8e-1659.68Show/hide
Query:  INPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
        IN  I+K   KVV+ + + +L      YCRCWRS TFP+CDGSH KHN+ TGDNVGPL+LKK
Subjt:  INPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK

Q7T326 CDGSH iron-sulfur domain-containing protein 28.1e-1759.68Show/hide
Query:  INPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
        IN  I+K   KVV+ + + +L  P   YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+LKK
Subjt:  INPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK

Q9FLI7 CDGSH iron-sulfur domain-containing protein NEET4.4e-3181.01Show/hide
Query:  RRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
        ++R VVVRAEGG     INP IRK+EDKVVDSV+V ELSK +TPYCRCWRSGTFPLCDGSHVKHNKA GDNVGPLLLKK
Subjt:  RRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK

Arabidopsis top hitse value%identityAlignment
AT5G51720.1 2 iron, 2 sulfur cluster binding3.1e-3281.01Show/hide
Query:  RRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
        ++R VVVRAEGG     INP IRK+EDKVVDSV+V ELSK +TPYCRCWRSGTFPLCDGSHVKHNKA GDNVGPLLLKK
Subjt:  RRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCCATTCTACCCATTTCTTCACCTTCTTCTTCCCTATCAACAAGACCCCATCTTCTCTCTCGTAATTTCAACGACAATGGACGACGTCGTACTGTTGTCGTAAG
AGCTGAAGGTGGCAGCAGCGGCGAACATATAAACCCTGCAATCAGAAAGAGTGAAGACAAAGTGGTGGACTCTGTGCTCGTTCCTGAACTTTCCAAGCCTCTCACTCCTT
ATTGCAGATGTTGGAGGTCAGGGACATTTCCTCTTTGTGATGGAAGCCATGTTAAGCACAACAAAGCAACTGGAGATAACGTTGGTCCTTTGCTCTTAAAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATCCATTCTACCCATTTCTTCACCTTCTTCTTCCCTATCAACAAGACCCCATCTTCTCTCTCGTAATTTCAACGACAATGGACGACGTCGTACTGTTGTCGTAAG
AGCTGAAGGTGGCAGCAGCGGCGAACATATAAACCCTGCAATCAGAAAGAGTGAAGACAAAGTGGTGGACTCTGTGCTCGTTCCTGAACTTTCCAAGCCTCTCACTCCTT
ATTGCAGATGTTGGAGGTCAGGGACATTTCCTCTTTGTGATGGAAGCCATGTTAAGCACAACAAAGCAACTGGAGATAACGTTGGTCCTTTGCTCTTAAAGAAGTAG
Protein sequenceShow/hide protein sequence
MASILPISSPSSSLSTRPHLLSRNFNDNGRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK