| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004145446.1 DNA-directed RNA polymerases II and IV subunit 5A [Cucumis sativus] | 1.90e-140 | 100 | Show/hide |
Query: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Subjt: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Subjt: VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| XP_008459046.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1 [Cucumis melo] | 2.12e-137 | 97.07 | Show/hide |
Query: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
MVLSEEEIT+LFR RKTVLQMLRDRGF+VGDFELAMSREQFKNQ+GETMKKED+VINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Subjt: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNE+KKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Subjt: VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| XP_016902349.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like isoform X2 [Cucumis melo] | 4.50e-131 | 94.63 | Show/hide |
Query: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
MVLSEEEIT+LFR RKTVLQMLRDRGF+VGDFELAMSREQFKNQ+GETMKKED+VINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Subjt: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNE+KKTLLERYTVKDTQ VTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Subjt: VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| XP_022959553.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 8.30e-117 | 81.55 | Show/hide |
Query: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
MVL+EEEIT+LFR RKTVLQML+DRG+ VGDFE+ MSREQFKN+YGE+MK+ED+VINK+ RN+SSDQIY+FFPEEPKV VKT++TY NRMKS+NVFRAIL
Subjt: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICE-APKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYV
VVQ+ L+ FAR+ I E + KFHLEVFQEAELLVNIKDHVL+PEHQLL+NE+KKTLLERYTVK+TQLPR+QVTDP+ARYYG+KRGQVVKIIRPSETAGRYV
Subjt: VVQEKLSSFARSSICE-APKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_038895255.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Benincasa hispida] | 2.38e-116 | 82.52 | Show/hide |
Query: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
MVLSEEEITKLFR RKTVLQML+DRG+ VGD ELAMSREQFK ++GE+MK+EDLVINKS RNNSS+QIY+FFPEEPKV +KTV+TY+NRMKS+NV RA+L
Subjt: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICE-APKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYV
VVQ+ L+ FAR+ + E + +FHLEVFQEAEL+VNIKDHVLIPEHQLLTNE+KKTLLERYTVK+TQLPR+QVTDPIARYYGMKRGQVVKIIRPSETAGRYV
Subjt: VVQEKLSSFARSSICE-APKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LYM6 Uncharacterized protein | 9.18e-141 | 100 | Show/hide |
Query: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Subjt: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Subjt: VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| A0A1S3C8T2 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1 | 1.03e-137 | 97.07 | Show/hide |
Query: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
MVLSEEEIT+LFR RKTVLQMLRDRGF+VGDFELAMSREQFKNQ+GETMKKED+VINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Subjt: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNE+KKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Subjt: VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| A0A1S4E290 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X2 | 2.18e-131 | 94.63 | Show/hide |
Query: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
MVLSEEEIT+LFR RKTVLQMLRDRGF+VGDFELAMSREQFKNQ+GETMKKED+VINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Subjt: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNE+KKTLLERYTVKDTQ VTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Subjt: VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| A0A5A7TIR4 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1 | 1.03e-137 | 97.07 | Show/hide |
Query: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
MVLSEEEIT+LFR RKTVLQMLRDRGF+VGDFELAMSREQFKNQ+GETMKKED+VINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Subjt: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNE+KKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Subjt: VVQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| A0A6J1KT45 DNA-directed RNA polymerases II and IV subunit 5A-like | 4.02e-117 | 81.55 | Show/hide |
Query: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
MVL+EEEIT+LFR RKTVLQML+DRG+ VGDFE+ MSREQFKN+YGE+MK+ED+VINK+ RN+SSDQIY+FFPEEPKV VKT++TY NRMKS+NVFRAIL
Subjt: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICE-APKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYV
VVQ+ L+ FAR+ I E + KFHLEVFQEAELLVNIKDHVL+PEHQLL+NE+KKTLLERYTVK+TQLPR+QVTDP+ARYYG+KRGQVVKIIRPSETAGRYV
Subjt: VVQEKLSSFARSSICE-APKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| B0BNE2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 8.6e-52 | 48.54 | Show/hide |
Query: EEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGE-----TMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAI
EEE +L++ RKT++Q+ DRG++V EL + E+FK Q+G+ ++ DL + + ++ +DQ++VFFPEEPKV +KT++ Y RM+ +N+ RA+
Subjt: EEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGE-----TMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAI
Query: LVVQEKLSSFARSSICE-APKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRY
+VVQ+ ++ A+ S+ + APK+ LE F + ELL+NI +H L+PEH ++T E+ LL RY ++++QLPR+Q DP+ARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQEKLSSFARSSICE-APKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 4.1e-78 | 69.76 | Show/hide |
Query: VLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAILV
+L+EEE+ +L+R +KT++QMLRDRG+ + D EL M+++QF ++G+ MK+EDLV K+ RN++SDQ+Y+FFP+E KV VKT++ Y NRMKS+NVFRAILV
Subjt: VLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAILV
Query: VQEKLSSFARSSICE-APKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
VQ+ L+ FAR+ I E + KFHLEVFQEAE+LVNIK+HVL+PEHQ+LT E+KKTLLERYTVK+TQLPR+QVTDPIARY+G+KRGQVVKIIRPSETAGRYVT
Subjt: VQEKLSSFARSSICE-APKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| Q5R587 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 2.5e-51 | 48.06 | Show/hide |
Query: EEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGE-----TMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAI
EEE +L++ RKT++Q+ DRG++V EL + E+F+ Q+G+ ++ DL + + ++ +DQ++VFFPEEPKV +KT++ Y RM+ +N+ RA+
Subjt: EEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGE-----TMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAI
Query: LVVQEKLSSFARSSICE-APKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRY
+VVQ+ ++ A+ S+ + APK+ LE F + ELL+NI +H L+PEH ++T E+ LL RY +++ QLPR+Q DP+ARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQEKLSSFARSSICE-APKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 8.6e-52 | 48.54 | Show/hide |
Query: EEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGE-----TMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAI
EEE +L++ RKT++Q+ DRG++V EL + E+FK Q+G+ ++ DL + + ++ +DQ++VFFPEEPKV +KT++ Y RM+ +N+ RA+
Subjt: EEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGE-----TMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAI
Query: LVVQEKLSSFARSSICE-APKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRY
+VVQ+ ++ A+ S+ + APK+ LE F + ELL+NI +H L+PEH ++T E+ LL RY ++++QLPR+Q DP+ARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQEKLSSFARSSICE-APKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Q9N5K2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 4.3e-51 | 51.18 | Show/hide |
Query: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMK-----KEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNV
M E E +L+R RKTVLQM+ DRG++V EL E FK QYG+ + DL I + ++ +DQ++VFFPE+ K+ +KT++ +M+ N+
Subjt: MVLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMK-----KEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNV
Query: FRAILVVQEKLSSFARSSICE-APKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSET
RAI+VVQ ++ A+ SI + APK+ LE F EAEL+VNI +H L+PEH ++T E+K LL RY +KD+QLPR+Q DP+ARY+G++RGQVVKIIRPSET
Subjt: FRAILVVQEKLSSFARSSICE-APKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSET
Query: AGRYVTYRYVV
AGRY+TYR VV
Subjt: AGRYVTYRYVV
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 5.1e-31 | 37.62 | Show/hide |
Query: SEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTY-INRMKSDNVFRAILVV
S E K + AR+T ++MLRDRG+ V D ++ +S +QF+ YGE + L I+ R +SS +I V F V V +R + + +N+ ILV+
Subjt: SEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTY-INRMKSDNVFRAILVV
Query: QEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVTYR
Q +++ A ++ E F +E+F+ +LLVN+ HVL P+HQ+L +++K++LL+++++++ QLPR+ DPI RYYG++ GQV+K+ E + +VTYR
Subjt: QEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVTYR
Query: YV
V
Subjt: YV
|
|
| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 2.9e-79 | 69.76 | Show/hide |
Query: VLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAILV
+L+EEE+ +L+R +KT++QMLRDRG+ + D EL M+++QF ++G+ MK+EDLV K+ RN++SDQ+Y+FFP+E KV VKT++ Y NRMKS+NVFRAILV
Subjt: VLSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAILV
Query: VQEKLSSFARSSICE-APKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
VQ+ L+ FAR+ I E + KFHLEVFQEAE+LVNIK+HVL+PEHQ+LT E+KKTLLERYTVK+TQLPR+QVTDPIARY+G+KRGQVVKIIRPSETAGRYVT
Subjt: VQEKLSSFARSSICE-APKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 1.6e-29 | 36.5 | Show/hide |
Query: EITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRT-YINRMKSDNVFRAILVVQEK
E + + AR T +MLRDRG+ V + EL+++ +F++ +GE + E L I +R++ +I V F ++VK+VR +I + + ILV+Q K
Subjt: EITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRT-YINRMKSDNVFRAILVVQEK
Query: LSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVTYRYVV
++ FA+ ++ P F +E F +LLVNI H+ P+ ++L E+K+ LL ++ ++D QLP +Q D RYYG+K+ QVVKI E G +VTYR ++
Subjt: LSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVTYRYVV
|
|
| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 3.3e-30 | 36.95 | Show/hide |
Query: LSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYI-NRMKSDNVFRAILV
LS EE + + AR+ LQMLRDRG+ V D ++ +S F+ YGE + L I+ R++S+ ++ + F V V +R+ + + + + + ILV
Subjt: LSEEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETMKKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYI-NRMKSDNVFRAILV
Query: VQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVTY
+Q +++ A +I E F +E+FQ +LLVNI H L P+HQ+L +E+K TLL+++++++ QLPR+ D I RYYG+++GQVVK+ E +V +
Subjt: VQEKLSSFARSSICEAPKFHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVTY
Query: RYV
R V
Subjt: RYV
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| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 3.6e-45 | 46.6 | Show/hide |
Query: EEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETM---KKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYIN-RMKSDNVFRAIL
++EIT++F+ R+TVLQMLRDRG+ + + +L + RE+F ++ +TM KE L ++ + N +D+IYVF+PE PKV V ++ + +M+ D V R I+
Subjt: EEEITKLFRARKTVLQMLRDRGFVVGDFELAMSREQFKNQYGETM---KKEDLVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYIN-RMKSDNVFRAIL
Query: VVQEKLSSFARSSICEAPK-FHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYV
VV +++ AR ++ E K +EVF+EAEL+ NI +H L+ ++ +L ++ KK LL YTV+DTQLPR+ VTDP+ARYYG+KRGQVVKI R T+ Y
Subjt: VVQEKLSSFARSSICEAPK-FHLEVFQEAELLVNIKDHVLIPEHQLLTNEDKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYR+ V
Subjt: TYRYVV
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