; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G21534 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G21534
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionGlycine cleavage system H protein
Genome locationctg944:391950..395453
RNA-Seq ExpressionCucsat.G21534
SyntenyCucsat.G21534
Gene Ontology termsGO:0009249 - protein lipoylation (biological process)
GO:0019464 - glycine decarboxylation via glycine cleavage system (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005960 - glycine cleavage complex (cellular component)
InterPro domainsIPR000089 - Biotin/lipoyl attachment
IPR002930 - Glycine cleavage system H-protein
IPR003016 - 2-oxo acid dehydrogenase, lipoyl-binding site
IPR011053 - Single hybrid motif
IPR017453 - Glycine cleavage system H-protein, subgroup
IPR033753 - Glycine cleavage system H-protein/Simiate


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145438.1 glycine cleavage system H protein 2, mitochondrial [Cucumis sativus]4.08e-86100Show/hide
Query:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII
        SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII
Subjt:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII

Query:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH
        KVEVSDSGELKKLMDSEQYSKFCEEEDSKH
Subjt:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH

XP_008459025.1 PREDICTED: glycine cleavage system H protein 2, mitochondrial [Cucumis melo]2.75e-8498.46Show/hide
Query:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII
        SVVKDLKYATSHEWVKVEGDKATVGITDHAQ HLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII
Subjt:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII

Query:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH
        KVEVSDSGELK LMDSEQYSKFCEEEDSKH
Subjt:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH

XP_022142648.1 glycine cleavage system H protein 2, mitochondrial [Momordica charantia]5.30e-8293.94Show/hide
Query:  SLSVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGW
        S SV+KDLKYATSHEWVKVEG++ATVGITDHAQ HLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGW
Subjt:  SLSVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGW

Query:  IIKVEVSDSGELKKLMDSEQYSKFCEEEDSKH
        IIKVEVS+SGELK LMDS+QYSKFCEEEDSKH
Subjt:  IIKVEVSDSGELKKLMDSEQYSKFCEEEDSKH

XP_023520355.1 glycine cleavage system H protein 2, mitochondrial [Cucurbita pepo subsp. pepo]7.53e-8294.62Show/hide
Query:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII
        SVVKDLKYATSHEWVKVEGDKAT+GITDHAQ HLGDVVYVELPEVG SVKQDGSFGAVESVKATSDINSPVSGKI+EVN+ELSSSPGLVNSSPYENGWII
Subjt:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII

Query:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH
        KVEVSDS ELK LMDSEQYSKFCEEEDSKH
Subjt:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH

XP_038893845.1 glycine cleavage system H protein 2, mitochondrial [Benincasa hispida]2.75e-8498.46Show/hide
Query:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII
        SVVKDLKYATSHEWVKVEGDKATVGITDHAQ HLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII
Subjt:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII

Query:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH
        KVEVSDSGELK LMDSEQYSKFCEEEDSKH
Subjt:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH

TrEMBL top hitse value%identityAlignment
A0A0A0M3S2 Glycine cleavage system H protein1.97e-86100Show/hide
Query:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII
        SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII
Subjt:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII

Query:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH
        KVEVSDSGELKKLMDSEQYSKFCEEEDSKH
Subjt:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH

A0A1S3C983 Glycine cleavage system H protein1.33e-8498.46Show/hide
Query:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII
        SVVKDLKYATSHEWVKVEGDKATVGITDHAQ HLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII
Subjt:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII

Query:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH
        KVEVSDSGELK LMDSEQYSKFCEEEDSKH
Subjt:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH

A0A5D3CLV3 Glycine cleavage system H protein1.33e-8498.46Show/hide
Query:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII
        SVVKDLKYATSHEWVKVEGDKATVGITDHAQ HLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII
Subjt:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII

Query:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH
        KVEVSDSGELK LMDSEQYSKFCEEEDSKH
Subjt:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH

A0A6J1CNS6 Glycine cleavage system H protein2.57e-8293.94Show/hide
Query:  SLSVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGW
        S SV+KDLKYATSHEWVKVEG++ATVGITDHAQ HLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGW
Subjt:  SLSVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGW

Query:  IIKVEVSDSGELKKLMDSEQYSKFCEEEDSKH
        IIKVEVS+SGELK LMDS+QYSKFCEEEDSKH
Subjt:  IIKVEVSDSGELKKLMDSEQYSKFCEEEDSKH

A0A6J1EGY1 Glycine cleavage system H protein5.18e-8293.85Show/hide
Query:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII
        SVVKDLKYATSHEWVKVEGDKAT+GITDHAQ HLGDVVYVELPE+G SVKQDGSFGAVESVKATSDINSPVSGKI+EVN+ELSSSPGLVNSSPYENGWII
Subjt:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII

Query:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH
        KVEVSDS ELK LMDSEQYSKFCEEEDSKH
Subjt:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH

SwissProt top hitse value%identityAlignment
O82179 Glycine cleavage system H protein 2, mitochondrial7.9e-5681.4Show/hide
Query:  VVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWIIK
        V+KDLKYA SHEWVK++G+KAT GITDHAQ HLGDVVYVELP+VG SV Q  SFGAVESVKATSDINSPVSGK++EVNEEL+ SPGLVNSSPYE GWIIK
Subjt:  VVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWIIK

Query:  VEVSDSGELKKLMDSEQYSKFCEEEDSKH
        VE+SD+GE +KLMDS++YSKFCEEED+KH
Subjt:  VEVSDSGELKKLMDSEQYSKFCEEEDSKH

P46485 Glycine cleavage system H protein, mitochondrial1.4e-4464.18Show/hide
Query:  LYGCHVSLSVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSS
        L+ C  S +V+  LKYA SHEWVK EG  AT+GITDHAQ HLG+VV+VELPEVG SV +   FGAVESVKATSD+NSP+SG+I+EVN +L+ +PGL+N S
Subjt:  LYGCHVSLSVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSS

Query:  PYENGWIIKVEVSDSGELKKLMDSEQYSKFCEEE
        PYE+GW+IKV+ S+  EL  LM  ++Y+KFCEEE
Subjt:  PYENGWIIKVEVSDSGELKKLMDSEQYSKFCEEE

P49359 Glycine cleavage system H protein, mitochondrial2.8e-4566.92Show/hide
Query:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII
        SV+  LKYA SHEWVK EG  AT+GITDHAQ HLG+VV+V+LPE G SV +   FGAVESVKATSD+NSP+SG+I+EVN +LS +PGL+NSSPYE+GW+I
Subjt:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII

Query:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH
        KV+ S+  EL  LM +++Y+KFCEEEDS H
Subjt:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH

Q39732 Glycine cleavage system H protein, mitochondrial6.3e-4566.15Show/hide
Query:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII
        SV+  LKYA SHEWVK EG  AT+GITDHAQ HLG+VV+V+LPE G SV +   FGAVESVKATSD+NSP+SG+I+EVN +LS +PGL+NSSPYE+GW+I
Subjt:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII

Query:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH
        KV+ S+  EL  LM +++Y+KFCEEED+ H
Subjt:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH

Q9LQL0 Glycine cleavage system H protein 3, mitochondrial1.8e-4466.15Show/hide
Query:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII
        SV++ LKYA SHEWVK EG  AT+GITDHAQ HLG+VV+VELPE  +SV ++ SFGAVESVKATS+I SP+SG++IEVN +L+ SPGL+NSSPYE+GW+I
Subjt:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII

Query:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH
        KV+ S   EL+ LM  ++Y+KFCEEED+ H
Subjt:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH

Arabidopsis top hitse value%identityAlignment
AT1G32470.1 Single hybrid motif superfamily protein1.3e-4566.15Show/hide
Query:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII
        SV++ LKYA SHEWVK EG  AT+GITDHAQ HLG+VV+VELPE  +SV ++ SFGAVESVKATS+I SP+SG++IEVN +L+ SPGL+NSSPYE+GW+I
Subjt:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII

Query:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH
        KV+ S   EL+ LM  ++Y+KFCEEED+ H
Subjt:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH

AT2G35120.1 Single hybrid motif superfamily protein5.6e-5781.4Show/hide
Query:  VVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWIIK
        V+KDLKYA SHEWVK++G+KAT GITDHAQ HLGDVVYVELP+VG SV Q  SFGAVESVKATSDINSPVSGK++EVNEEL+ SPGLVNSSPYE GWIIK
Subjt:  VVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWIIK

Query:  VEVSDSGELKKLMDSEQYSKFCEEEDSKH
        VE+SD+GE +KLMDS++YSKFCEEED+KH
Subjt:  VEVSDSGELKKLMDSEQYSKFCEEEDSKH

AT2G35370.1 glycine decarboxylase complex H6.5e-4566.15Show/hide
Query:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII
        +V++ LKYA SHEWVK EG  AT+GIT HAQ HLG+VV+VELPE  TSV ++ SFGAVESVKATS+I SP+SG+IIEVN++L+ SPGL+NSSPYE+GW+I
Subjt:  SVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWII

Query:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH
        KV+ S   EL+ LM  ++Y+KFCEEED+ H
Subjt:  KVEVSDSGELKKLMDSEQYSKFCEEEDSKH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGGTTTTGTTTCTCTTTGCTGTTTGTTTGATCAATGGCAGACTCTTTTCAAGAATTGGAGGATTTGTCTCGTTTTTTTGTATGGGTGTCACGTCTCATTGTCTGT
TGTGAAGGACTTGAAATATGCTACCTCTCATGAATGGGTAAAAGTAGAAGGGGACAAAGCAACTGTTGGCATAACTGATCATGCTCAAGGTCATTTAGGTGATGTTGTCT
ATGTTGAATTACCAGAAGTTGGAACCTCTGTTAAACAGGATGGCAGCTTCGGTGCGGTAGAAAGCGTTAAAGCTACCAGTGATATCAACTCTCCAGTGTCGGGGAAAATC
ATTGAGGTCAATGAAGAGCTCAGCAGCTCCCCTGGTCTGGTGAACTCAAGCCCATATGAAAATGGATGGATTATTAAGGTGGAGGTTAGTGACAGTGGTGAACTGAAAAA
ATTGATGGACTCTGAGCAATACTCCAAGTTTTGTGAAGAAGAAGATTCAAAGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGGTTTTGTTTCTCTTTGCTGTTTGTTTGATCAATGGCAGACTCTTTTCAAGAATTGGAGGATTTGTCTCGTTTTTTTGTATGGGTGTCACGTCTCATTGTCTGT
TGTGAAGGACTTGAAATATGCTACCTCTCATGAATGGGTAAAAGTAGAAGGGGACAAAGCAACTGTTGGCATAACTGATCATGCTCAAGGTCATTTAGGTGATGTTGTCT
ATGTTGAATTACCAGAAGTTGGAACCTCTGTTAAACAGGATGGCAGCTTCGGTGCGGTAGAAAGCGTTAAAGCTACCAGTGATATCAACTCTCCAGTGTCGGGGAAAATC
ATTGAGGTCAATGAAGAGCTCAGCAGCTCCCCTGGTCTGGTGAACTCAAGCCCATATGAAAATGGATGGATTATTAAGGTGGAGGTTAGTGACAGTGGTGAACTGAAAAA
ATTGATGGACTCTGAGCAATACTCCAAGTTTTGTGAAGAAGAAGATTCAAAGCATTGA
Protein sequenceShow/hide protein sequence
MMGFVSLCCLFDQWQTLFKNWRICLVFLYGCHVSLSVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKI
IEVNEELSSSPGLVNSSPYENGWIIKVEVSDSGELKKLMDSEQYSKFCEEEDSKH