; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G2206 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G2206
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionElongation factor 1-delta 1-like
Genome locationctg1002:1090488..1093010
RNA-Seq ExpressionCucsat.G2206
SyntenyCucsat.G2206
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141960.1 uncharacterized protein LOC101206523 [Cucumis sativus]8.29e-6196.77Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPVRFSLL
        MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPP R S+L
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPVRFSLL

XP_008440144.1 PREDICTED: uncharacterized protein LOC103484698 isoform X2 [Cucumis melo]7.91e-5792.55Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYH-QNHHSPPVRFSLL
        MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTD+FPTDNHHPYH Q+HH PP R S+L
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYH-QNHHSPPVRFSLL

XP_022950290.1 uncharacterized protein LOC111453422 [Cucurbita moschata]7.67e-5789.25Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPVRFSLL
        MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRD+SRASLGNEEELIA AAPPTTT++FPTDNHHPYHQ+HHSPP R S+L
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPVRFSLL

XP_022977957.1 uncharacterized protein LOC111478092 [Cucurbita maxima]4.62e-5891.4Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPVRFSLL
        MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA AAPPTTTD+FPTDNHHPYHQ+HHSPP R S+L
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPVRFSLL

XP_023545041.1 uncharacterized protein LOC111804467 [Cucurbita pepo subsp. pepo]2.67e-5790.32Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPVRFSLL
        MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA AAPPTTT++FPTDNHHPYHQ+HHSPP R S+L
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPVRFSLL

TrEMBL top hitse value%identityAlignment
A0A0A0KJ83 Uncharacterized protein4.01e-6196.77Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPVRFSLL
        MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPP R S+L
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPVRFSLL

A0A1S3B0G0 uncharacterized protein LOC103484698 isoform X23.83e-5792.55Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYH-QNHHSPPVRFSLL
        MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTD+FPTDNHHPYH Q+HH PP R S+L
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYH-QNHHSPPVRFSLL

A0A6J1BXX7 uncharacterized protein LOC111005740 isoform X25.07e-5587.1Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPVRFSLL
        MDDRKEKTAPWLSVPQFGDWDQKG LPDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA A PPT TD+FPT+NHHPYHQ+HH PP R S+L
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPVRFSLL

A0A6J1GFA9 uncharacterized protein LOC1114534223.71e-5789.25Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPVRFSLL
        MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRD+SRASLGNEEELIA AAPPTTT++FPTDNHHPYHQ+HHSPP R S+L
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPVRFSLL

A0A6J1IJV1 uncharacterized protein LOC1114780922.24e-5891.4Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPVRFSLL
        MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA AAPPTTTD+FPTDNHHPYHQ+HHSPP R S+L
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPVRFSLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09960.1 FUNCTIONS IN: molecular_function unknown3.0e-2461.54Show/hide
Query:  DDRKEKTAPWLSVPQFGDWDQK--GQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTT---DTFPTDNHHPYHQNHHSPP
        DDRKEK  PWLSVPQFGDWDQK  G +PDYS+DF+K+RE RKQNKRD SRASLGNEEELI      T+T    T  ++N   +  +HH  P
Subjt:  DDRKEKTAPWLSVPQFGDWDQK--GQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTT---DTFPTDNHHPYHQNHHSPP

AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein2.9e-1142.35Show/hide
Query:  DRKEKTAPWLSVPQFGDWDQKG--QLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHS
        D++ + A W  VPQFG WDQKG     +YS+ FSK R NRKQNK  V  +SLG+E+EL+               NH   H  H +
Subjt:  DRKEKTAPWLSVPQFGDWDQKG--QLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHS

AT5G64850.1 FUNCTIONS IN: molecular_function unknown3.7e-2258.95Show/hide
Query:  MDDRKE-KTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELI--------AKAAPPTTTDTFPTDNHHPYHQNHHSP
        M+DRKE K +PWLSVPQFGDWDQKG   DYS+DFSK+RE RK NKRD SRASLGNEEELI           A P    T  +DN++    +HH P
Subjt:  MDDRKE-KTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELI--------AKAAPPTTTDTFPTDNHHPYHQNHHSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATCGGAAGGAGAAAACTGCTCCCTGGCTTTCAGTGCCACAATTTGGAGACTGGGACCAGAAGGGACAGCTGCCTGATTACTCGCTTGATTTCTCAAAACTTAG
GGAAAATAGGAAACAAAACAAGAGAGACGTGTCTCGGGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCAAAGCCGCACCCCCAACGACAACAGACACTTTCCCTACTG
ATAATCATCACCCTTATCATCAGAATCACCACTCCCCACCAGTAAGATTTTCGCTTCTCCCTAAAATTTCATATTGGTTATTTTTTATTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATCGGAAGGAGAAAACTGCTCCCTGGCTTTCAGTGCCACAATTTGGAGACTGGGACCAGAAGGGACAGCTGCCTGATTACTCGCTTGATTTCTCAAAACTTAG
GGAAAATAGGAAACAAAACAAGAGAGACGTGTCTCGGGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCAAAGCCGCACCCCCAACGACAACAGACACTTTCCCTACTG
ATAATCATCACCCTTATCATCAGAATCACCACTCCCCACCAGTAAGATTTTCGCTTCTCCCTAAAATTTCATATTGGTTATTTTTTATTATTTGA
Protein sequenceShow/hide protein sequence
MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIAKAAPPTTTDTFPTDNHHPYHQNHHSPPVRFSLLPKISYWLFFII