CuGenDBv2

Gene ID	Cucsat.G2214
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	transmembrane protein 220
Genome location	ctg1002:1233100..1234908
RNA-Seq Expression	Cucsat.G2214
Synteny	Cucsat.G2214
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR029377 - TMEM220 protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004141949.1 transmembrane protein 220 isoform X2 [Cucumis sativus]

2.22e-100

95.45

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGKAISSFFSLWL
        TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYG A    FS  L
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGKAISSFFSLWL

XP_008440175.1 PREDICTED: transmembrane protein 220 [Cucumis melo]

4.48e-95

92.86

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MA PSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGKAISSFFSLWL
        TGSGLVVCSMILHLIAASSSSPKLR TSKSK  RVFPRHLTYG A    FS  L
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGKAISSFFSLWL

XP_031742851.1 transmembrane protein 220 isoform X1 [Cucumis sativus]

3.27e-124

100

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGKAISSFFSLWLQMEIREAKIKPTSRNSMFGGI
        TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGKAISSFFSLWLQMEIREAKIKPTSRNSMFGGI
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGKAISSFFSLWLQMEIREAKIKPTSRNSMFGGI

XP_038881309.1 transmembrane protein 220 isoform X1 [Benincasa hispida]

1.74e-85

86.49

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYS CS+LMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKW VS+EAM +VAKA MG GICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSK-SKSKRVFPRHLTYGKAIS
        TGSGLVVCSMILHLIAASSSS    R  + SKSKR FPR+LTYG AI+
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSK-SKSKRVFPRHLTYGKAIS

XP_038881310.1 transmembrane protein 220 isoform X2 [Benincasa hispida]

3.84e-85

83.87

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYS CS+LMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKW VS+EAM +VAKA MG GICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSK-SKSKRVFPRHLTYGKAISSFFSLWL
        TGSGLVVCSMILHLIAASSSS    R  + SKSKR FPR+LTYG A    FS  L
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSK-SKSKRVFPRHLTYGKAISSFFSLWL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KI28 Uncharacterized protein

1.08e-100

95.45

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGKAISSFFSLWL
        TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYG A    FS  L
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGKAISSFFSLWL

A0A1S3B186 transmembrane protein 220

2.17e-95

92.86

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MA PSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGKAISSFFSLWL
        TGSGLVVCSMILHLIAASSSSPKLR TSKSK  RVFPRHLTYG A    FS  L
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGKAISSFFSLWL

A0A5D3CNK6 Transmembrane protein 220

2.17e-95

92.86

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MA PSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGKAISSFFSLWL
        TGSGLVVCSMILHLIAASSSSPKLR TSKSK  RVFPRHLTYG A    FS  L
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGKAISSFFSLWL

A0A6J1HG20 uncharacterized protein LOC111463236

1.02e-74

73.38

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYS CS+LM FLFAYSTAVQFNDPDWYLW+PLYGCACAVNLL W+VSL+ +  +AKA +G+GICLWVKVVAED++NGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGKAISSFFSLWL
        TGSGLVV SM+LHLIA SSSS + R     K +RVF R+++YG A    FS  L
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGKAISSFFSLWL

A0A6J1KP55 uncharacterized protein LOC111497019

8.32e-74

73.38

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYS CS+LM FLFAYSTAVQFNDPDWYLW+PLYGCACAVNLL W+VSLE +  VAKA +G+GICLWVKVVAED+++GIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGKAISSFFSLWL
        TGSGLVV SM+LHLIA SSSS + R     K +RVF R++++G A    FS  L
Subjt:  TGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGKAISSFFSLWL

SwissProt top hits

e value

%identity

Alignment

Q6QAJ8 Transmembrane protein 220

7.5e-04

30.25

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Query:  LYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTG---S
        L+ +C+ LM   FA +  VQ NDPD  +WV +Y     + LL   ++ E   NV   ++     L+  V A     G+A +L     + ++ E+ G   S
Subjt:  LYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTG---S

Query:  GLVVCSMILHLIAASSSSP
        GLV+ +  + L  +SS +P
Subjt:  GLVVCSMILHLIAASSSSP

Q8BP07 Transmembrane protein 220

3.4e-04

29.51

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Query:  LYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGI---CLWVKVVAEDYMNGIAGFLSLDLSERVVREKTG-
        L+ +C+ LM   FA +  VQ NDPD  LWV +Y     + LL     L   N + K+   + +    LW          G+A    L   + ++ E+ G 
Subjt:  LYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGI---CLWVKVVAEDYMNGIAGFLSLDLSERVVREKTG-

Query:  --SGLVVCSMILHLIAASSSSP
          SGLV+ +  + L  +SS +P
Subjt:  --SGLVVCSMILHLIAASSSSP

Arabidopsis top hits

e value

%identity

Alignment

AT2G23755.1 unknown protein

5.6e-31

55.37

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Query:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK
        MA P  L+  CS+LM FLFAYS +VQ NDPDWY W PLY  AC VNL+ +   ++ M  + + A+ +G+ L VKV+AED +    G LSLDL+ RVVREK
Subjt:  MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSS
         GSGLV+ SM+L L A+SSSS
Subjt:  TGSGLVVCSMILHLIAASSSS

Sequences

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CDS sequence

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ATGGCAACACCCTCCAAATTATACAGCAGCTGCTCTGTGTTAATGGGGTTTTTGTTTGCTTATTCCACAGCTGTTCAGTTTAACGATCCTGATTGGTATTTATGGGTTCC
ACTTTATGGCTGTGCTTGTGCTGTGAATCTTCTCAAATGGAACGTCTCTTTAGAAGCCATGAATAATGTTGCCAAGGCAGCAATGGGAGTTGGAATATGTTTGTGGGTGA
AGGTTGTAGCAGAGGATTATATGAATGGAATTGCAGGTTTTCTCTCTCTAGATTTAAGTGAGAGAGTGGTGAGGGAGAAAACAGGAAGTGGATTGGTTGTGTGTTCCATG
ATTTTGCATCTGATAGCTGCATCTTCATCATCCCCAAAACTTCGTAGAACAAGTAAAAGTAAAAGTAAAAGGGTGTTTCCAAGACATCTCACATATGGTAAGGCTATAAG
CTCATTCTTCTCTCTTTGGTTACAAATGGAAATTAGAGAGGCTAAAATTAAACCAACATCAAGGAATAGCATGTTTGGTGGCATTTAG

mRNA sequence

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Protein sequence

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MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSM
ILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGKAISSFFSLWLQMEIREAKIKPTSRNSMFGGI

Cucsat.G2214 (gene) of Cucumber (B10) v3 genome