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Cucsat.G2288 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G2288
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationctg1002:2924546..2926326
RNA-Seq ExpressionCucsat.G2288
SyntenyCucsat.G2288
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036333.1 uncharacterized protein E6C27_scaffold18G001320 [Cucumis melo var. makuwa]9.97e-6892.56Show/hide
Query:  MKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVNISIKMDGGTKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEM
        MKIRREIENEIERDLEEEIKGGIYQQALRLHRLYH RKNS+HI PAAKA KELLEVNISIKMDGGTKMEI+ETKKEAP PESLRPRTSRSNT SRSVPEM
Subjt:  MKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVNISIKMDGGTKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEM

Query:  KRLDWAKSLRSSAAPVPSLGK
        KRLDWAKSLRSSAAPVP +GK
Subjt:  KRLDWAKSLRSSAAPVPSLGK

XP_004143553.1 uncharacterized protein LOC101209623 isoform X1 [Cucumis sativus]1.56e-9798.72Show/hide
Query:  MSLFPPSRSPHNNAHANM--MEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVNISIKMDGG
        MSLFPPSRSPHNNAHANM  MEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVNISIKMDGG
Subjt:  MSLFPPSRSPHNNAHANM--MEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVNISIKMDGG

Query:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK
        TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK
Subjt:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK

XP_008440564.1 PREDICTED: uncharacterized protein LOC103484942 [Cucumis melo]1.25e-8791.03Show/hide
Query:  MSLFPPSRSPHNNAHANMM--EEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVNISIKMDGG
        MSL  PSRSPHNNAHANM+  EEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYH RKNS+HI PAAKA KELLEVNISIKMDGG
Subjt:  MSLFPPSRSPHNNAHANMM--EEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVNISIKMDGG

Query:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK
        TKMEI+ETKKEAP PESLRPRTSRSNT SRSVPEMKRLDWAKSLRSSAAPVP +GK
Subjt:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK

XP_031742667.1 uncharacterized protein LOC101209623 isoform X2 [Cucumis sativus]1.52e-99100Show/hide
Query:  MSLFPPSRSPHNNAHANMMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVNISIKMDGGTK
        MSLFPPSRSPHNNAHANMMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVNISIKMDGGTK
Subjt:  MSLFPPSRSPHNNAHANMMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVNISIKMDGGTK

Query:  MEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK
        MEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK
Subjt:  MEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK

XP_038883628.1 uncharacterized protein LOC120074545 [Benincasa hispida]5.41e-6878.48Show/hide
Query:  PSILGLADMSLFPPSRSPHNNAHANMM--EEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVN
        P+ILGLADMSL PPS SPHN  HA ++  E+KGL+H  ISEEEMKIRREIENEIERDLEEEIKGGIYQ ALRL+RLY  RK S HI P  K KK+LLEVN
Subjt:  PSILGLADMSLFPPSRSPHNNAHANMM--EEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVN

Query:  ISIKMDGGTKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAP
        ISIKMDGGT MEI+ETKK AP PESLRPRTSRS+T + +VPEMKRLDWAKSLRSSAAP
Subjt:  ISIKMDGGTKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAP

TrEMBL top hitse value%identityAlignment
A0A0A0KJZ6 Uncharacterized protein7.54e-9898.72Show/hide
Query:  MSLFPPSRSPHNNAHANM--MEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVNISIKMDGG
        MSLFPPSRSPHNNAHANM  MEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVNISIKMDGG
Subjt:  MSLFPPSRSPHNNAHANM--MEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVNISIKMDGG

Query:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK
        TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK
Subjt:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK

A0A1S3B1F7 uncharacterized protein LOC1034849426.06e-8891.03Show/hide
Query:  MSLFPPSRSPHNNAHANMM--EEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVNISIKMDGG
        MSL  PSRSPHNNAHANM+  EEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYH RKNS+HI PAAKA KELLEVNISIKMDGG
Subjt:  MSLFPPSRSPHNNAHANMM--EEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVNISIKMDGG

Query:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK
        TKMEI+ETKKEAP PESLRPRTSRSNT SRSVPEMKRLDWAKSLRSSAAPVP +GK
Subjt:  TKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK

A0A5D3CLA4 Uncharacterized protein4.83e-6892.56Show/hide
Query:  MKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVNISIKMDGGTKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEM
        MKIRREIENEIERDLEEEIKGGIYQQALRLHRLYH RKNS+HI PAAKA KELLEVNISIKMDGGTKMEI+ETKKEAP PESLRPRTSRSNT SRSVPEM
Subjt:  MKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVNISIKMDGGTKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEM

Query:  KRLDWAKSLRSSAAPVPSLGK
        KRLDWAKSLRSSAAPVP +GK
Subjt:  KRLDWAKSLRSSAAPVPSLGK

A0A6J1HHY9 uncharacterized protein LOC111463142 isoform X25.61e-5868.9Show/hide
Query:  PSILGLADMSLFPPSRSPHNNAHANMME--EKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVN
        P ILGL  +SL PP     +NAHA +++  EKGL H  ISEEEMKIRREIE EIERDLEEEIKGGIYQQALRL RLY  R  S  INP  K KKELLEVN
Subjt:  PSILGLADMSLFPPSRSPHNNAHANMME--EKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVN

Query:  ISIKMDGGTKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK
        ISIKM+GGTKMEIK    + P P S R RT+RS+T SR+VPE+KRLDW KSLRSSAAP P +GK
Subjt:  ISIKMDGGTKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK

A0A6J1KUF8 uncharacterized protein LOC1114972925.43e-5870.12Show/hide
Query:  PSILGLADMSLFPPSRSPHNNAHANMME--EKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVN
        P ILGL  +SL PPS SPHN  HA +++  EKGL H  ISEEEMKIRREIE EIERDLEEEIKGGIYQQALRL RLY  R  S  INP  K KKELLEVN
Subjt:  PSILGLADMSLFPPSRSPHNNAHANMME--EKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVN

Query:  ISIKMDGGTKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK
        ISIKM+GGTKMEIK    E P P +   RT+RS+T SR+VPE+KRLDW KSLRSSAAP P +GK
Subjt:  ISIKMDGGTKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26290.1 unknown protein3.2e-1340.74Show/hide
Query:  HANMMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHI-NPAAKAKKELLEVNISIKMDGGTKMEIKETKKEAPQP
        H +   +   +  ++S++E +IR E+E EIER+LE E K GIY  AL+L RLY  R+    + + + +  K +LEVNI+IKM+G TK+EI E KKE    
Subjt:  HANMMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHI-NPAAKAKKELLEVNISIKMDGGTKMEIKETKKEAPQP

Query:  ESLRPRTS
        ++ +   S
Subjt:  ESLRPRTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCAAAAACCCATAAATTAAAACCCTTCAACTTCAACTTCAACCCCCAACATCCATCCATCCTAGGGTTGGCTGATATGTCACTTTTCCCACCTAGTCGGTCTCCTCATAA
TAATGCTCATGCAAATATGATGGAGGAGAAGGGTTTAAAGCATGAAATTATTTCAGAGGAAGAGATGAAAATCCGGCGAGAAATTGAGAATGAAATAGAGAGAGATTTGG
AGGAAGAGATTAAGGGAGGGATATACCAACAAGCTCTCCGCCTTCACCGCCTTTATCACTTCCGGAAAAATTCCTCTCATATTAACCCGGCGGCGAAAGCCAAGAAGGAG
CTTTTGGAGGTAAATATCAGCATCAAAATGGATGGGGGGACTAAAATGGAAATAAAAGAGACAAAAAAGGAGGCGCCGCAGCCGGAAAGTCTCCGACCGAGGACTTCCCG
GTCCAACACTTTCTCTCGATCTGTCCCGGAGATGAAAAGGTTGGATTGGGCTAAGTCTCTCCGGTCGAGTGCAGCGCCGGTGCCGTCTCTCGGAAAG
mRNA sequenceShow/hide mRNA sequence
CCAAAAACCCATAAATTAAAACCCTTCAACTTCAACTTCAACCCCCAACATCCATCCATCCTAGGGTTGGCTGATATGTCACTTTTCCCACCTAGTCGGTCTCCTCATAA
TAATGCTCATGCAAATATGATGGAGGAGAAGGGTTTAAAGCATGAAATTATTTCAGAGGAAGAGATGAAAATCCGGCGAGAAATTGAGAATGAAATAGAGAGAGATTTGG
AGGAAGAGATTAAGGGAGGGATATACCAACAAGCTCTCCGCCTTCACCGCCTTTATCACTTCCGGAAAAATTCCTCTCATATTAACCCGGCGGCGAAAGCCAAGAAGGAG
CTTTTGGAGGTAAATATCAGCATCAAAATGGATGGGGGGACTAAAATGGAAATAAAAGAGACAAAAAAGGAGGCGCCGCAGCCGGAAAGTCTCCGACCGAGGACTTCCCG
GTCCAACACTTTCTCTCGATCTGTCCCGGAGATGAAAAGGTTGGATTGGGCTAAGTCTCTCCGGTCGAGTGCAGCGCCGGTGCCGTCTCTCGGAAAG
Protein sequenceShow/hide protein sequence
PKTHKLKPFNFNFNPQHPSILGLADMSLFPPSRSPHNNAHANMMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKE
LLEVNISIKMDGGTKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGK