; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G2293 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G2293
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description40S ribosomal protein S6
Genome locationctg1002:3050087..3052209
RNA-Seq ExpressionCucsat.G2293
SyntenyCucsat.G2293
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001377 - Ribosomal protein S6e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6470668.1 hypothetical protein ZIOFF_071745 [Zingiber officinale]1.84e-6392.66Show/hide
Query:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
        MKQGVLTTG VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKGENDLPGLT IEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
Subjt:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY

Query:  RRTFTNKLG
        RRTFT K G
Subjt:  RRTFTNKLG

PKI39418.1 hypothetical protein CRG98_040176 [Punica granatum]3.65e-6390.83Show/hide
Query:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
        MKQGVLT G VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKGENDLPGLT IEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTY
Subjt:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY

Query:  RRTFTNKLG
        RRTFT K G
Subjt:  RRTFTNKLG

XP_031742586.1 LOW QUALITY PROTEIN: 40S ribosomal protein S6-like [Cucumis sativus]1.42e-7798.31Show/hide
Query:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
        MKQGVLTTG VRLLLHRGTPCFRGYGRR GKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
Subjt:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY

Query:  RRTFTNKLGGFAYQCSDT
        RRTFTNKLGGFAYQCSDT
Subjt:  RRTFTNKLGGFAYQCSDT

XP_038882784.1 40S ribosomal protein S6-like [Benincasa hispida]6.57e-6593.58Show/hide
Query:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
        MKQGVLTTG VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIVNPDLSVLNLV VKKGENDLPGLT I+KPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
Subjt:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY

Query:  RRTFTNKLG
        RRTFTNK G
Subjt:  RRTFTNKLG

XP_042446061.1 40S ribosomal protein S6 [Zingiber officinale]1.53e-6392.66Show/hide
Query:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
        MKQGVLTTG VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKGENDLPGLT IEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
Subjt:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY

Query:  RRTFTNKLG
        RRTFT K G
Subjt:  RRTFTNKLG

TrEMBL top hitse value%identityAlignment
A0A022QBV4 40S ribosomal protein S62.11e-6390.83Show/hide
Query:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
        MKQGVLT G VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKG+NDLPGLT +EKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
Subjt:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY

Query:  RRTFTNKLG
        RRTFTNK G
Subjt:  RRTFTNKLG

A0A2I0I607 Uncharacterized protein1.77e-6390.83Show/hide
Query:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
        MKQGVLT G VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKGENDLPGLT IEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTY
Subjt:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY

Query:  RRTFTNKLG
        RRTFT K G
Subjt:  RRTFTNKLG

A0A2P2K597 40S ribosomal protein S6-like3.04e-6390.83Show/hide
Query:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
        MKQGVLT G VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKGENDLPGLT IEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTY
Subjt:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY

Query:  RRTFTNKLG
        RRTFT K G
Subjt:  RRTFTNKLG

A0A444E4G3 Uncharacterized protein3.46e-6390.83Show/hide
Query:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
        MKQGVLT G VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKGENDLPGLT IEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTY
Subjt:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY

Query:  RRTFTNKLG
        RRTFT K G
Subjt:  RRTFTNKLG

V7CMH4 40S ribosomal protein S62.11e-6390.83Show/hide
Query:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
        MKQGVLT G VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKG+NDLPGLT +EKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
Subjt:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY

Query:  RRTFTNKLG
        RRTFTNK G
Subjt:  RRTFTNKLG

SwissProt top hitse value%identityAlignment
O48549 40S ribosomal protein S6-16.7e-4987.16Show/hide
Query:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
        MKQGVLT G VRLLLHRGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKGENDLPGLT  EKPRMRGPKRASKIRKLFNL K+DDVR YVNTY
Subjt:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY

Query:  RRTFTNKLG
        RR FTNK G
Subjt:  RRTFTNKLG

P29345 40S ribosomal protein S6 (Fragment)1.6e-3773.64Show/hide
Query:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
        MKQGVLT G VRLLL+RGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKGENDLPGLT  EKPRMRGP+   +   L+   K+DDVRKYVNT 
Subjt:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY

Query:  RRTFTNKLGG
           FT K  G
Subjt:  RRTFTNKLGG

P51430 40S ribosomal protein S6-26.7e-4987.16Show/hide
Query:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
        MKQGVLT G VRLLLHRGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKG +DLPGLT  EKPRMRGPKRASKIRKLFNL K+DDVRKYVNTY
Subjt:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY

Query:  RRTFTNKLG
        RRTFTNK G
Subjt:  RRTFTNKLG

Q5E995 40S ribosomal protein S61.8e-3071.13Show/hide
Query:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYV
        MKQGVLT G VRLLL +G  C+R   RR G+R+RKSVRGCIV+ +LSVLNLV VKKGE D+PGLT    PR  GPKRAS+IRKLFNLSK+DDVR+YV
Subjt:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYV

Q9M3V8 40S ribosomal protein S66.5e-5290.83Show/hide
Query:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
        MKQGVLT G VRLLLHRGTPCFRGYGRR G+RRRKSVRGCIV+PDLSVLNLV VKKGENDLPGLT +EKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTY
Subjt:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY

Query:  RRTFTNKLG
        RRTFTNK G
Subjt:  RRTFTNKLG

Arabidopsis top hitse value%identityAlignment
AT4G31700.1 ribosomal protein S64.8e-5087.16Show/hide
Query:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
        MKQGVLT G VRLLLHRGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKGENDLPGLT  EKPRMRGPKRASKIRKLFNL K+DDVR YVNTY
Subjt:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY

Query:  RRTFTNKLG
        RR FTNK G
Subjt:  RRTFTNKLG

AT4G31700.2 ribosomal protein S64.8e-5087.16Show/hide
Query:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
        MKQGVLT G VRLLLHRGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKGENDLPGLT  EKPRMRGPKRASKIRKLFNL K+DDVR YVNTY
Subjt:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY

Query:  RRTFTNKLG
        RR FTNK G
Subjt:  RRTFTNKLG

AT5G10360.1 Ribosomal protein S6e4.8e-5087.16Show/hide
Query:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY
        MKQGVLT G VRLLLHRGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKG +DLPGLT  EKPRMRGPKRASKIRKLFNL K+DDVRKYVNTY
Subjt:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTY

Query:  RRTFTNKLG
        RRTFTNK G
Subjt:  RRTFTNKLG

AT5G10360.2 Ribosomal protein S6e2.9e-2362.64Show/hide
Query:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGE--NDLPGLTGIEKPRMRGPKRASKIRKLFNLSK
        MKQGVLT G VRLLLHRGTPCFRG+GRR G+RRRKSVRGCIV+PDLSVLNLV VKKG+  +  P +  +  P     KRA    K   ++K
Subjt:  MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGE--NDLPGLTGIEKPRMRGPKRASKIRKLFNLSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACAAGGTGTCTTGACCACTGGCCATGTTCGCCTTTTGCTGCACAGAGGTACTCCTTGTTTTCGTGGTTATGGTAGGAGGAAAGGTAAGAGAAGGAGGAAATCTGT
CCGAGGTTGCATTGTTAATCCAGACCTCTCTGTTTTGAATTTGGTGACTGTGAAGAAGGGCGAGAATGACCTACCTGGCCTAACAGGTATTGAGAAGCCAAGAATGCGAG
GTCCGAAAAGGGCATCTAAAATCCGGAAACTCTTCAATCTCTCCAAGGATGATGATGTTCGAAAGTATGTCAACACATACCGCAGAACCTTCACAAATAAACTTGGCGGG
TTTGCTTACCAGTGTTCTGATACATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACAAGGTGTCTTGACCACTGGCCATGTTCGCCTTTTGCTGCACAGAGGTACTCCTTGTTTTCGTGGTTATGGTAGGAGGAAAGGTAAGAGAAGGAGGAAATCTGT
CCGAGGTTGCATTGTTAATCCAGACCTCTCTGTTTTGAATTTGGTGACTGTGAAGAAGGGCGAGAATGACCTACCTGGCCTAACAGGTATTGAGAAGCCAAGAATGCGAG
GTCCGAAAAGGGCATCTAAAATCCGGAAACTCTTCAATCTCTCCAAGGATGATGATGTTCGAAAGTATGTCAACACATACCGCAGAACCTTCACAAATAAACTTGGCGGG
TTTGCTTACCAGTGTTCTGATACATAG
Protein sequenceShow/hide protein sequence
MKQGVLTTGHVRLLLHRGTPCFRGYGRRKGKRRRKSVRGCIVNPDLSVLNLVTVKKGENDLPGLTGIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTNKLGG
FAYQCSDT