; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G2305 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G2305
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionTranslation initiation factor IF-2, putative isoform 1
Genome locationctg1002:3346002..3349229
RNA-Seq ExpressionCucsat.G2305
SyntenyCucsat.G2305
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604007.1 hypothetical protein SDJN03_04616, partial [Cucurbita argyrosperma subsp. sororia]6.62e-14287.97Show/hide
Query:  MARRKAKKTVKKSSPSPILEAKDEAAN------------DEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQ
        MARRKAKK+VKKSSPSPI EAKD +AN            DEDVERHA AIRAIRDVEI RLITELRLLRSYFNKEQLQTPLLQFFEEKLP LSISR GEQ
Subjt:  MARRKAKKTVKKSSPSPILEAKDEAAN------------DEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQ

Query:  GEIEVQWKDTEDELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSI
        GEIEVQWKDTEDEL TNPADGIDIHASLLHRLS AYPNCSAGMRSFNGFEFSSKSVKTNPF VENLQIPNF LEEPSDN+VLGMPD+ QTPGVSNQRLSI
Subjt:  GEIEVQWKDTEDELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSI

Query:  GMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG
        GMTPKTRRLPKPGE+LVSIHGSPLGVY+EDNMEAIHESEEG
Subjt:  GMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG

XP_004143493.2 uncharacterized protein LOC101215210 [Cucumis sativus]7.35e-159100Show/hide
Query:  MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTED
        MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTED
Subjt:  MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTED

Query:  ELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKTRRLPKP
        ELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKTRRLPKP
Subjt:  ELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKTRRLPKP

Query:  GEMLVSIHGSPLGVYKEDNMEAIHESEEG
        GEMLVSIHGSPLGVYKEDNMEAIHESEEG
Subjt:  GEMLVSIHGSPLGVYKEDNMEAIHESEEG

XP_008440665.1 PREDICTED: uncharacterized protein LOC103485008 [Cucumis melo]1.12e-15396.94Show/hide
Query:  MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTED
        MARRKAKKTVKKS+PSP+LEAKDE ANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTED
Subjt:  MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTED

Query:  ELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKTRRLPKP
        ELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNF LEEPSDN+VLGMPDI QTPGV NQRLSIGMTPKTRRLPKP
Subjt:  ELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKTRRLPKP

Query:  GEMLVSIHGSPLGVYKEDNMEAIHESEEG
        GEMLVSIHGSPLGVYKEDNMEAIHESEEG
Subjt:  GEMLVSIHGSPLGVYKEDNMEAIHESEEG

XP_023543921.1 uncharacterized protein LOC111803645 [Cucurbita pepo subsp. pepo]2.21e-14086.72Show/hide
Query:  MARRKAKKTVKKSSPSPILEAKDEAAN------------DEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQ
        MARRKAKK+VKKSSPSP+ EAKD +AN            DEDVERHA AIRAIRDVEI RLITELRLLRSYFNKEQLQTPLLQFFEEKLP LSISR GEQ
Subjt:  MARRKAKKTVKKSSPSPILEAKDEAAN------------DEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQ

Query:  GEIEVQWKDTEDELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSI
        GEIEVQWK+TEDEL TNPADGIDIHASLLHRLS AYPNCSAGMRSFNGFEFSSKSVKTNPF VENLQIPNF LEEPSDN+VLGMPD+ QTPGVSNQRLSI
Subjt:  GEIEVQWKDTEDELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSI

Query:  GMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG
        GMTPKTRRLPKPGE+LVSIHGSPLGVY+E+NMEAIHESEEG
Subjt:  GMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG

XP_038882572.1 uncharacterized protein LOC120073798 [Benincasa hispida]2.04e-14089.08Show/hide
Query:  MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTED
        M RRKA+KTVKK SPSP+ EAKDEAANDEDVERHAAAIRAIRDVEI RLITELRLLRSYFN+EQLQTPLLQFF+EKLP LSISR GE+GEIEVQWK+ ED
Subjt:  MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTED

Query:  ELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKTRRLPKP
        EL +NPAD IDIHASLLHRLS AYPNCSAG+RS NGFEFSSKSVKTNPF VENL+IPNFVLEEPSDN+VLGMPDI QTPGV+NQRLSIGMTPKTRRLPKP
Subjt:  ELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKTRRLPKP

Query:  GEMLVSIHGSPLGVYKEDNMEAIHESEEG
        GEMLVSIHGSPLGVY+EDNMEAIHESEEG
Subjt:  GEMLVSIHGSPLGVYKEDNMEAIHESEEG

TrEMBL top hitse value%identityAlignment
A0A0A0KK81 Uncharacterized protein6.89e-15799.13Show/hide
Query:  MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTED
        MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEI RLIT LRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTED
Subjt:  MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTED

Query:  ELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKTRRLPKP
        ELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKTRRLPKP
Subjt:  ELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKTRRLPKP

Query:  GEMLVSIHGSPLGVYKEDNMEAIHESEEG
        GEMLVSIHGSPLGVYKEDNMEAIHESEEG
Subjt:  GEMLVSIHGSPLGVYKEDNMEAIHESEEG

A0A1S3B1M1 uncharacterized protein LOC1034850085.43e-15496.94Show/hide
Query:  MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTED
        MARRKAKKTVKKS+PSP+LEAKDE ANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTED
Subjt:  MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTED

Query:  ELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKTRRLPKP
        ELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNF LEEPSDN+VLGMPDI QTPGV NQRLSIGMTPKTRRLPKP
Subjt:  ELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKTRRLPKP

Query:  GEMLVSIHGSPLGVYKEDNMEAIHESEEG
        GEMLVSIHGSPLGVYKEDNMEAIHESEEG
Subjt:  GEMLVSIHGSPLGVYKEDNMEAIHESEEG

A0A1S4DWB9 uncharacterized protein LOC1034894363.52e-14089.36Show/hide
Query:  MARRKAKKTVKKSSPSPILEAKDEAAN------DEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQ
        MARRKAKKTVKKSSPS    AKDEAA+      DEDVERHAAAIRAIRDVEI RLITELRLLRSYFNKEQLQTPLLQFFEEKLP LSIS  G+QGEIEVQ
Subjt:  MARRKAKKTVKKSSPSPILEAKDEAAN------DEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQ

Query:  WKDTEDELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKT
        WKDTEDEL TNPADG+DIHASLLHRLS AYP CSAGMRSFNGFEFSSKSVKTNPF  ENLQIPNFVLEEPSDN+VLGMPDI QTPG+SNQRLSIGMTPKT
Subjt:  WKDTEDELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKT

Query:  RRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG
        RRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG
Subjt:  RRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG

A0A5D3CLG2 Uncharacterized protein5.43e-15496.94Show/hide
Query:  MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTED
        MARRKAKKTVKKS+PSP+LEAKDE ANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTED
Subjt:  MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTED

Query:  ELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKTRRLPKP
        ELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNF LEEPSDN+VLGMPDI QTPGV NQRLSIGMTPKTRRLPKP
Subjt:  ELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKTRRLPKP

Query:  GEMLVSIHGSPLGVYKEDNMEAIHESEEG
        GEMLVSIHGSPLGVYKEDNMEAIHESEEG
Subjt:  GEMLVSIHGSPLGVYKEDNMEAIHESEEG

A0A6J1ILD3 uncharacterized protein LOC1114784968.41e-13885.83Show/hide
Query:  MARRKAKKTVKKSSPSPILEAKDEAAN------------DEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQ
        MARRKAKK+VKKSSPSP+ EAKD +AN            DEDVERHA AIRAIRDVEI RLITELRLLRSYFNKEQLQTPLLQFF EKLP LSISR GEQ
Subjt:  MARRKAKKTVKKSSPSPILEAKDEAAN------------DEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQ

Query:  GEIEVQWKDTEDELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSI
        GEIEVQWKDTEDEL TNPADGIDIHASLLHRLS AYPNCSAG+RSFNGFEFSSKSVKTNPF VENLQIPNFVLEEPSDN+VLGMPD+ QTPG SNQRLSI
Subjt:  GEIEVQWKDTEDELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSI

Query:  GMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE
        GMTPKTRRLPKPGE++VSIHGSPLGVY+E NMEAIHESEE
Subjt:  GMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G39630.1 unknown protein1.1e-5050.43Show/hide
Query:  MARRKAKKTVKKSSPSP------ILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQ
        M +RKAK+ VK +           +E K E   DE+VER  AAIRAIRDVEI +++T LRLLRSYF +EQL TP+L FF+E LP LSISR  E GEIE++
Subjt:  MARRKAKKTVKKSSPSP------ILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQ

Query:  WKDTEDELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKT
        W+D   +      +G+D++ S+L RLS+ + +  +   S  G++    +VK N    +N Q+ N V +  S+N +L   D  QTPGV+ QRLS GMTPKT
Subjt:  WKDTEDELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKT

Query:  RRLPKPGEMLVSIHGSPLGVYKED-NMEAIHE
         RLPK GEM++S+HGSPLGVYKED NM AI+E
Subjt:  RRLPKPGEMLVSIHGSPLGVYKED-NMEAIHE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGGCGAAAGGCGAAGAAAACGGTTAAGAAGTCCAGCCCTTCACCTATACTAGAAGCAAAGGATGAAGCAGCGAATGACGAGGATGTTGAACGGCATGCTGCTGC
AATCCGTGCCATTCGGGATGTGGAGATCGGGCGTTTGATTACTGAATTGCGGTTGCTTCGTTCGTATTTCAACAAGGAGCAATTGCAAACTCCTTTATTGCAATTCTTCG
AAGAAAAACTTCCTAGGTTGTCTATTTCGAGAACAGGCGAACAAGGAGAAATTGAAGTACAATGGAAGGATACAGAGGATGAACTACGCACCAATCCAGCTGATGGAATA
GATATACATGCGTCTCTCCTTCACCGCCTGTCGATAGCTTATCCTAACTGCTCTGCCGGAATGCGATCTTTCAATGGATTCGAATTTTCCAGTAAATCAGTGAAAACGAA
TCCTTTCATTGTCGAGAACCTGCAAATTCCAAACTTTGTTTTGGAGGAGCCCTCGGATAATTTGGTGCTCGGCATGCCAGACATACACCAAACTCCTGGGGTGAGTAACC
AACGATTATCCATTGGGATGACTCCGAAAACCCGAAGACTGCCAAAACCAGGCGAGATGCTTGTGTCCATCCATGGATCCCCCTTGGGTGTTTACAAGGAAGACAACATG
GAAGCAATCCATGAATCGGAAGAGGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGGCGAAAGGCGAAGAAAACGGTTAAGAAGTCCAGCCCTTCACCTATACTAGAAGCAAAGGATGAAGCAGCGAATGACGAGGATGTTGAACGGCATGCTGCTGC
AATCCGTGCCATTCGGGATGTGGAGATCGGGCGTTTGATTACTGAATTGCGGTTGCTTCGTTCGTATTTCAACAAGGAGCAATTGCAAACTCCTTTATTGCAATTCTTCG
AAGAAAAACTTCCTAGGTTGTCTATTTCGAGAACAGGCGAACAAGGAGAAATTGAAGTACAATGGAAGGATACAGAGGATGAACTACGCACCAATCCAGCTGATGGAATA
GATATACATGCGTCTCTCCTTCACCGCCTGTCGATAGCTTATCCTAACTGCTCTGCCGGAATGCGATCTTTCAATGGATTCGAATTTTCCAGTAAATCAGTGAAAACGAA
TCCTTTCATTGTCGAGAACCTGCAAATTCCAAACTTTGTTTTGGAGGAGCCCTCGGATAATTTGGTGCTCGGCATGCCAGACATACACCAAACTCCTGGGGTGAGTAACC
AACGATTATCCATTGGGATGACTCCGAAAACCCGAAGACTGCCAAAACCAGGCGAGATGCTTGTGTCCATCCATGGATCCCCCTTGGGTGTTTACAAGGAAGACAACATG
GAAGCAATCCATGAATCGGAAGAGGGTTGA
Protein sequenceShow/hide protein sequence
MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGI
DIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPGVSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNM
EAIHESEEG